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Carg15817 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15817
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionWD repeat protein
Genome locationCarg_Chr04:19084528..19088202
RNA-Seq ExpressionCarg15817
SyntenyCarg15817
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602211.1 hypothetical protein SDJN03_07444, partial [Cucurbita argyrosperma subsp. sororia]2.1e-105100Show/hide
Query:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]2.1e-9289.58Show/hide
Query:  QSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QS +EIRE++ET+S SEL+ LL++QNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITI+IT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022960369.1 uncharacterized protein LOC111461110 [Cucurbita moschata]1.2e-10096.43Show/hide
Query:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQS SEIREIEETSSNSEL+ LLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVFVVAIITIMITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]7.6e-10397.45Show/hide
Query:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQS SEIREIEETSSNSEL+ LLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITI+ITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]1.9e-10196.94Show/hide
Query:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQS SEIREIEETSSNSEL+ LLQS N SSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVF VAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein1.9e-9188.02Show/hide
Query:  QSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QS SEIRE+EET+S SEL+ LL++ NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITI+IT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A1S3C3V7 uncharacterized protein LOC1034965711.0e-9289.58Show/hide
Query:  QSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QS +EIRE++ET+S SEL+ LL++QNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITI+IT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1BYH2 uncharacterized protein LOC1110067351.1e-8886.15Show/hide
Query:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ Q+ SEIREIEET SNSE + LLQSQNPSS+SK VKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLE+REILDKYGFKS FAFKP++GRGVPIR
Subjt:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKP+TRI+F VAI+TI+IT L  SR SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+G
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG

A0A6J1HAT7 uncharacterized protein LOC1114611105.9e-10196.43Show/hide
Query:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQS SEIREIEETSSNSEL+ LLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVFVVAIITIMITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1JTD1 uncharacterized protein LOC1114873203.7e-10397.45Show/hide
Query:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQS SEIREIEETSSNSEL+ LLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITI+ITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein1.3e-6362.77Show/hide
Query:  REIEETSSNSELESLLQSQNPSS--NSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS
        +EIEET+       LL++  P S   S T   KVPEVEIHLY+ GKGPIDVFKS+LGG+EQDQLEVR IL+KYG K++FAF  + GR VPIRF+PRNGRS
Subjt:  REIEETSSNSELESLLQSQNPSS--NSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS

Query:  ILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        +L YRDGA IYIDGEP+DSL+KP+TRI+  V I+T++IT L   ++   W+K     G FPPW+LAC+VIVFTR+RKRTRD  KKYGW
Subjt:  ILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCATCAGAGCGGGAGCGAAATCCGTGAAATTGAAGAAACCAGCTCGAACTCAGAGCTGGAATCTCTTCTTCAGAGCCAGAACCCGAGTTCGAATTCCAAAAC
AGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAGTCAAGCCTTGGGGGTTGGGAACAAGACCAGCTCGAGG
TCCGAGAGATTCTCGATAAATACGGCTTCAAAAGCGTTTTCGCCTTCAAGCCTGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAATGGTAGGTCTATATTG
ACTTACAGAGATGGAGCCGAAATTTACATCGACGGAGAGCCTAAGGATTCCCTGATCAAACCCGTAACCCGGATAGTTTTTGTCGTGGCAATTATTACCATTATGATAAC
GCTTCTCTCGACCTCAAGAAACTCACAGGGATGGATGAAGAAACTAAACATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGCGTCGTTATCGTCTTCACACGCTCGA
GGAAGAGAACTAGGGACTTACTGAAGAAGTACGGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTAGCTGGTTGGAACAAATAAAATCCATTACCGTACATCAAAAACATTGCGCGAAATGGAGGATCATCAGAGCGGGAGCGAAATCCGTGAAATTGAAGAAACCAGCT
CGAACTCAGAGCTGGAATCTCTTCTTCAGAGCCAGAACCCGAGTTCGAATTCCAAAACAGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAA
GGTCCGATCGATGTGTTTAAGTCAAGCCTTGGGGGTTGGGAACAAGACCAGCTCGAGGTCCGAGAGATTCTCGATAAATACGGCTTCAAAAGCGTTTTCGCCTTCAAGCC
TGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAATGGTAGGTCTATATTGACTTACAGAGATGGAGCCGAAATTTACATCGACGGAGAGCCTAAGGATTCCC
TGATCAAACCCGTAACCCGGATAGTTTTTGTCGTGGCAATTATTACCATTATGATAACGCTTCTCTCGACCTCAAGAAACTCACAGGGATGGATGAAGAAACTAAACATC
ACTGGGAACTTCCCTCCTTGGATTCTTGCTTGCGTCGTTATCGTCTTCACACGCTCGAGGAAGAGAACTAGGGACTTACTGAAGAAGTACGGTTGGTGAATCTCATTCTC
CAGGCCTTCCTATGTTGATTACGGCAGGTAAAATCAATGTGTTATGTTGATTATTGTTTCTTGATTTGAAACCTTGGAAATAGAAGATAATGATACAATACAAATGGAAC
GTTCTTGGTCCATTGCTATCATAAATTCCCTGCCTGGATCTGATCTTTTGACGTGGACTGAAAAAAGGGTATATGTTTGAACCAAGGGTTTTTAATTAGGTCGAGTGACA
CATTTCATTAATTTGAGTTATTATATAGTTTGGATTTATGTGTATAACTTGTTTGTCATAACTTCAATTCACAATCTTAAACGTTCTCTTGCTCGTTTAAACTCGAGTTA
CATAATTAGCCATGGTGAAGTTGAGTTTGAAAAAACGAGCATAAATAAGTTAAATTACCATCTTGCCCTTGCAATGGTTGATGAGAAGATTGAGAAGAATATCTATCAGG
GTATTGAATTACATTTAATTCATAAACTTTCAATTGATT
Protein sequenceShow/hide protein sequence
MEDHQSGSEIREIEETSSNSELESLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSIL
TYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITIMITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW