CuGenDBv2

Gene ID	Carg15821
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cleavage stimulating factor 64
Genome location	Carg_Chr04:19105109..19108895
RNA-Seq Expression	Carg15821
Synteny	Carg15821
Gene Ontology terms	GO:0031047 - gene silencing by RNA (biological process) GO:0042868 - antisense RNA metabolic process (biological process) GO:0045892 - negative regulation of transcription, DNA-templated (biological process) GO:0048589 - developmental growth (biological process) GO:0098789 - pre-mRNA cleavage required for polyadenylation (biological process) GO:0005847 - mRNA cleavage and polyadenylation specificity factor complex (cellular component) GO:0003729 - mRNA binding (molecular function)
InterPro domains	IPR026896 - Transcription termination and cleavage factor, C-terminal domain IPR038192 - Transcription termination and cleavage factor, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602216.1 Cleavage stimulating factor 64, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-170

99.37

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Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQ+VGSDADKSSQV
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
        LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        RQQVIQLQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

KAG7032897.1 Cleavage stimulating factor 64 [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-171

100

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Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
        LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        RQQVIQLQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

XP_022963998.1 cleavage stimulating factor 64 [Cucurbita moschata]

3.1e-170

99.37

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Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALAL GTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
        LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        RQQVIQLQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

XP_022990313.1 cleavage stimulating factor 64 [Cucurbita maxima]

2.4e-167

98.12

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Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVS TPQNPLAPHQFSASQR PLQSQIQP+LALQGTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHG AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
        LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFS GGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        RQQVIQLQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

XP_023550987.1 cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]

6.4e-168

97.81

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Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVS+TPQNPLAPHQFSASQRPPLQSQIQP+LALQGTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDAD+SSQV
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
         LGVDGKRKIPHGFSGTTNRPVK IKLEDGKGSPFS GGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        RQQVIQLQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C3F6 cleavage stimulating factor 64

1.3e-137

80.25

Show/hide

Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQ PNL+Q +THPQLPLH+IQQGQ SS+QIQPGLPPLAPNRMQTGF+PKKETQ+S+TPQNPLAPHQFSAS RP LQSQIQP+  LQG LTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGS LPS++L G++S+RQQVQ PTS+SLKQHMRPP QQY GHGGA+IPGHNA I NPEAKPSLLP PS+ D DFQPG S AY   QIVGSD DKSS V
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
         LGVDGKR + HGFSGTTNRPVKQIKLEDGKGSPFS GGLS S+G NG+ QLGIASDPN+ G Q+SEKPTS+LP +VES LLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        R QVI+LQ ALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

A0A5D3BZN4 Cleavage stimulating factor 64

1.3e-137

80.25

Show/hide

Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQ PNL+Q +THPQLPLH+IQQGQ SS+QIQPGLPPLAPNRMQTGF+PKKETQ+S+TPQNPLAPHQFSAS RP LQSQIQP+  LQG LTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGS LPS++L G++S+RQQVQ PTS+SLKQHMRPP QQY GHGGA+IPGHNA I NPEAKPSLLP PS+ D DFQPG S AY   QIVGSD DKSS V
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
         LGVDGKR + HGFSGTTNRPVKQIKLEDGKGSPFS GGLS S+G NG+ QLGIASDPN+ G Q+SEKPTS+LP +VES LLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        R QVI+LQ ALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

A0A6J1HJJ0 cleavage stimulating factor 64

1.5e-170

99.37

Show/hide

Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALAL GTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
        LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        RQQVIQLQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

A0A6J1JSX2 cleavage stimulating factor 64

1.2e-167

98.12

Show/hide

Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVS TPQNPLAPHQFSASQR PLQSQIQP+LALQGTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHG AVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
        LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFS GGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        RQQVIQLQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

A0A6J1K017 cleavage stimulating factor 64-like isoform X1

2.4e-136

81.19

Show/hide

Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLGMVTPQVLQ PNLRQPSTHPQLP H+IQQGQ  SLQIQ GLPPLAPNRMQTGFVPKKETQ+S+TPQNP APHQ SASQ PP QSQIQP+  LQGTLTG
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV
        IPGGS LPS+SL G++SVRQQ+QVP S+SLKQH+ PPSQQYSGHG A+IPGHNA IA+PEAKPSLLP PSL DADFQPG S A   SQIVGSD DKSS V
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQV

Query:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ
         LGVDGKR + HGFSGTT+RPVKQIKLEDGKG PFS GGLSAS+G NG+ QLGIASDPNL G  ISEKPTS+LPH+ ES LLQQVL+LTPEQLN LPLEQ
Subjt:  LLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQ

Query:  RQQVIQLQQALRRDQMRPS
        R+QVI+LQQALRRDQMRPS
Subjt:  RQQVIQLQQALRRDQMRPS

SwissProt top hits

e value

%identity

Alignment

Q9M9G6 Cleavage stimulating factor 64

2.6e-15

30.82

Show/hide

Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLG+V+PQVLQ+PN+ Q  +H  +    IQ  Q S   +   LPPLA    Q    P  +  V  + + P        SQ P L +Q             
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQ--IANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSS
         PG S   SV+ P     R QV+V  +   +Q + P S            G+++Q  + N   +PS +P  +LP++  Q G                ++ 
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQ--IANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSS

Query:  QVLLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPL
         +  G       PH    + NRP K +K+ED + +    G +S S+  N A                 + P + +  DV+S LLQQV+NLTPEQL LL  
Subjt:  QVLLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPL

Query:  EQRQQVIQLQQALRRDQM
        EQ+Q+V++LQQAL++D M
Subjt:  EQRQQVIQLQQALRRDQM

Arabidopsis top hits

e value

%identity

Alignment

AT1G71800.1 cleavage stimulating factor 64

1.9e-16

30.82

Show/hide

Query:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG
        MLG+V+PQVLQ+PN+ Q  +H  +    IQ  Q S   +   LPPLA    Q    P  +  V  + + P        SQ P L +Q             
Subjt:  MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTG

Query:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQ--IANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSS
         PG S   SV+ P     R QV+V  +   +Q + P S            G+++Q  + N   +PS +P  +LP++  Q G                ++ 
Subjt:  IPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQ--IANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSS

Query:  QVLLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPL
         +  G       PH    + NRP K +K+ED + +    G +S S+  N A                 + P + +  DV+S LLQQV+NLTPEQL LL  
Subjt:  QVLLGVDGKRKIPHGFSGTTNRPVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPL

Query:  EQRQQVIQLQQALRRDQM
        EQ+Q+V++LQQAL++D M
Subjt:  EQRQQVIQLQQALRRDQM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTTGGAATGGTCACTCCACAAGTGTTGCAGAATCCTAATTTACGGCAACCTTCAACTCATCCTCAGCTTCCTTTGCATGACATTCAGCAGGGTCAGTCATCATCTCT
TCAAATTCAACCAGGGCTGCCCCCTCTTGCACCCAACAGAATGCAGACTGGTTTTGTACCTAAAAAAGAAACTCAAGTATCTATCACGCCTCAAAATCCTTTGGCTCCCC
ATCAGTTTTCTGCGTCCCAACGGCCCCCGCTTCAGTCTCAAATTCAGCCCGCACTTGCTTTACAAGGCACTTTGACCGGAATACCTGGAGGCTCATTGCTTCCTTCCGTA
AGTTTGCCGGGAAGTATGTCTGTTAGACAACAGGTTCAGGTGCCCACCTCTGCTTCTTTAAAGCAGCACATGCGTCCCCCTTCTCAACAGTATTCAGGACATGGTGGAGC
TGTAATTCCAGGGCATAATGCTCAGATTGCTAACCCAGAAGCTAAACCTTCTCTTTTGCCTCGCCCTTCCTTACCAGATGCAGACTTTCAGCCTGGCTCCTCCGCAGCTT
ATGGTGCTTCCCAGATAGTGGGCAGTGATGCTGATAAGTCTTCTCAAGTACTTCTTGGTGTAGATGGTAAAAGAAAAATACCTCATGGCTTTTCAGGAACAACTAATCGC
CCTGTAAAGCAGATCAAATTAGAGGATGGAAAAGGCAGCCCTTTCTCGACCGGAGGTCTAAGTGCATCAGTAGGTAACAATGGAGCTAGACAACTTGGAATTGCCTCAGA
CCCCAATCTTCCGGGGATTCAAATCTCAGAGAAACCGACTTCAATGCTTCCCCACGACGTCGAGTCTGCATTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTA
ACTTGTTGCCGCTCGAACAGAGGCAGCAAGTTATTCAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCGGCCATCCTAG

mRNA sequence

Show/hide mRNA sequence

AGACTTTTCCTGGAGGCTTCCCTACATTTGATAGGTTCTTATAACATTTTCCTTCTGATTTCCAATTGGAAAGCCCTTTTGTAATTCACCTCTTGTTGATGGTAGAATTT
ATGAACTCATTTCATTTAGGAGTGAGATTGTGTCCAATTCTGTTATCTCTGTGTGAAAGCAATGTTGATGAATTTCTACTTTATGCTACTCTTATGATCTTATTGTCTAC
GTGCTTCTACATTCTAAACGCGTTTATGCCATCCATTTCTTCCAATTCTAGTAGTTACATGGGTTAACATTAATACGAAAAAAAGAAAAAAAACTATTAGGAGCTATTCA
TGACGTGAATAAAAATATGAGATTGAAGGTGACTGGTGAAATCTAGGTTGTTTTTGAAATGTGGATGGAAGCCATAAATGTCAAGGAAACCAAAGTACCAATCTCAAAAC
CTAATTTTGGGTTAAATTTTGATTGAACATCAATGTTGTTAGAATTACAATAGCTTTTTTATTTAGAGAGAGAGATAAAGGAACAGAAAAGACTTCAAATAAATATTTGG
GAATCAAGATTGCTGTAATGTGTTTATATTTATCATTGTACCTTATTTCGTTGACAATATTCTTTCTTTTAATGGACTATATCTCTTTTCGTATGCAACATCAACTAAGC
ATCTTTATTTTCCATTTTTTCTGAAATTTTGTTTGCAGTCACAGATAATGCTTGGAATGGTCACTCCACAAGTGTTGCAGAATCCTAATTTACGGCAACCTTCAACTCAT
CCTCAGCTTCCTTTGCATGACATTCAGCAGGGTCAGTCATCATCTCTTCAAATTCAACCAGGGCTGCCCCCTCTTGCACCCAACAGAATGCAGACTGGTTTTGTACCTAA
AAAAGAAACTCAAGTATCTATCACGCCTCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCGTCCCAACGGCCCCCGCTTCAGTCTCAAATTCAGCCCGCACTTGCTTTAC
AAGGCACTTTGACCGGAATACCTGGAGGCTCATTGCTTCCTTCCGTAAGTTTGCCGGGAAGTATGTCTGTTAGACAACAGGTTCAGGTGCCCACCTCTGCTTCTTTAAAG
CAGCACATGCGTCCCCCTTCTCAACAGTATTCAGGACATGGTGGAGCTGTAATTCCAGGGCATAATGCTCAGATTGCTAACCCAGAAGCTAAACCTTCTCTTTTGCCTCG
CCCTTCCTTACCAGATGCAGACTTTCAGCCTGGCTCCTCCGCAGCTTATGGTGCTTCCCAGATAGTGGGCAGTGATGCTGATAAGTCTTCTCAAGTACTTCTTGGTGTAG
ATGGTAAAAGAAAAATACCTCATGGCTTTTCAGGAACAACTAATCGCCCTGTAAAGCAGATCAAATTAGAGGATGGAAAAGGCAGCCCTTTCTCGACCGGAGGTCTAAGT
GCATCAGTAGGTAACAATGGAGCTAGACAACTTGGAATTGCCTCAGACCCCAATCTTCCGGGGATTCAAATCTCAGAGAAACCGACTTCAATGCTTCCCCACGACGTCGA
GTCTGCATTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTTGTTGCCGCTCGAACAGAGGCAGCAAGTTATTCAGCTCCAGCAAGCACTTCGCAGAGATC
AAATGCGGCCATCCTAGCAAGCAACTTACCGTCGATCAACCCGCACTCGCACTCTTGCAGCTCGACTCCAAGCACAAGTAGATTGTAAAATATTTGGCTCCCCAAAGATT
TAACGAGTGACAGTCTAAACACCTGTAAAATTATGCTTGCCAAAGTTGTCCAAAACCGACGGGTCCTGCCAACGAGGTACGAGTTTCATAAACAACATTCATGTAAGGCT
TACAACTTTGTGATTATAGTGATTCCTGAATAATAACAATTCAAGATAGGGTGGAAGAATTTTGATTTTTCTCAGGTCTCTCTTTTTGCCACTTTTGCTTTTGCACCCCT
TTCCTTTACATCGATTAATCGTCGTTTTCAGATTCTCGAGCTGCTATTTTATGGTTTCGGGTCATTGTTTCTCTGCGTTCTGTTGCTTGGATCTTAATTTTGTTCCTTAA
TGTCGATGTTCGTTTCGTTATATGTAATATTTCATTAAGGATTTGGTTAGTTTATAAAAGA

Protein sequence

Show/hide protein sequence

MLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQGQSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPALALQGTLTGIPGGSLLPSV
SLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGHNAQIANPEAKPSLLPRPSLPDADFQPGSSAAYGASQIVGSDADKSSQVLLGVDGKRKIPHGFSGTTNR
PVKQIKLEDGKGSPFSTGGLSASVGNNGARQLGIASDPNLPGIQISEKPTSMLPHDVESALLQQVLNLTPEQLNLLPLEQRQQVIQLQQALRRDQMRPS

Carg15821 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome