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Carg15832 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15832
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCCamK
Genome locationCarg_Chr04:19165718..19169531
RNA-Seq ExpressionCarg15832
SyntenyCarg15832
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032908.1 hypothetical protein SDJN02_06958, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-79100Show/hide
Query:  MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSLATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSG
        MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSLATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSG
Subjt:  MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSLATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSG

Query:  RVALSPFAHLLIASHDQFMFFSIGPSDKRRKGDSITYPERRMYKITPRDHISLLE
        RVALSPFAHLLIASHDQFMFFSIGPSDKRRKGDSITYPERRMYKITPRDHISLLE
Subjt:  RVALSPFAHLLIASHDQFMFFSIGPSDKRRKGDSITYPERRMYKITPRDHISLLE
XP_008456659.1 PREDICTED: uncharacterized protein LOC103496546 isoform X1 [Cucumis melo]2.2e-2871.68Show/hide
Query:  MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSL-ATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNS
        +EH LSN DSCIGSTDER  E+TR    + G+          +  RRASSP E  RLENPQS SRMSIVPSRLLSKRSK+RGARGISEDIFIAFSTSSNS
Subjt:  MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSL-ATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNS

Query:  GRVALSPFAHLLI
        GRVALSPFAHL I
Subjt:  GRVALSPFAHLLI
TrEMBL top hitse value%identityAlignment
A0A0A9BTC5 CCamK6.9e-1269.7Show/hide
Query:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHL
        RRASSP E  RLE+P   S MS VPSRLLS +S  RGARGISE IFIAFSTSSNS  VA SP  H+
Subjt:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHL
A0A1S3C3D6 uncharacterized protein LOC103496546 isoform X11.1e-2871.68Show/hide
Query:  MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSL-ATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNS
        +EH LSN DSCIGSTDER  E+TR    + G+          +  RRASSP E  RLENPQS SRMSIVPSRLLSKRSK+RGARGISEDIFIAFSTSSNS
Subjt:  MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSL-ATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNS

Query:  GRVALSPFAHLLI
        GRVALSPFAHL I
Subjt:  GRVALSPFAHLLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACATAATTTGTCCAATATGGATAGTTGTATTGGCAGCACAGATGAGAGAGGTAGAGAAGACACTAGAGGACATTCTCAGCAACAAGGTTCGTGCTCGTTGGCTAC
AAGTTGCAGTAACAATAAACTGCGAAGAGCATCATCGCCTTGTGAGTTACGAAGGCTCGAAAATCCACAAAGTAACTCGCGCATGTCAATTGTTCCATCCCGGTTATTGT
CAAAGAGGTCGAAAATTCGAGGTGCAAGAGGGATAAGTGAAGACATATTCATTGCTTTCAGCACCTCTTCAAATTCAGGAAGAGTAGCATTGTCCCCTTTTGCACATCTG
CTTATTGCAAGCCATGATCAGTTCATGTTTTTCTCGATTGGACCGAGCGATAAAAGGCGGAAAGGAGATTCCATTACATACCCTGAGAGAAGGATGTACAAAATCACTCC
CAGAGACCACATATCACTTTTGGAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACATAATTTGTCCAATATGGATAGTTGTATTGGCAGCACAGATGAGAGAGGTAGAGAAGACACTAGAGGACATTCTCAGCAACAAGGTTCGTGCTCGTTGGCTAC
AAGTTGCAGTAACAATAAACTGCGAAGAGCATCATCGCCTTGTGAGTTACGAAGGCTCGAAAATCCACAAAGTAACTCGCGCATGTCAATTGTTCCATCCCGGTTATTGT
CAAAGAGGTCGAAAATTCGAGGTGCAAGAGGGATAAGTGAAGACATATTCATTGCTTTCAGCACCTCTTCAAATTCAGGAAGAGTAGCATTGTCCCCTTTTGCACATCTG
CTTATTGCAAGCCATGATCAGTTCATGTTTTTCTCGATTGGACCGAGCGATAAAAGGCGGAAAGGAGATTCCATTACATACCCTGAGAGAAGGATGTACAAAATCACTCC
CAGAGACCACATATCACTTTTGGAG
Protein sequenceShow/hide protein sequence
MEHNLSNMDSCIGSTDERGREDTRGHSQQQGSCSLATSCSNNKLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHL
LIASHDQFMFFSIGPSDKRRKGDSITYPERRMYKITPRDHISLLE