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Carg15835 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15835
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:19178246..19179670
RNA-Seq ExpressionCarg15835
SyntenyCarg15835
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602230.1 hypothetical protein SDJN03_07463, partial [Cucurbita argyrosperma subsp. sororia]3.9e-27100Show/hide
Query:  MFPLHLHTAALAARTLLPSSSSRVGHLHLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
        MFPLHLHTAALAARTLLPSSSSRVGHLHLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
Subjt:  MFPLHLHTAALAARTLLPSSSSRVGHLHLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
KAG7016372.1 hypothetical protein SDJN02_21480, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1365.98Show/hide
Query:  MKPLICKSLLPILYTFLLMFPLHLHTAALAARTLLP-------SSSS--RVGHLH-LPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
        MKPLICKSL+PIL +FLLM    L T   AAR LLP       SSSS  +V  LH LPLT RKL ETASSTSSSLR+IP+SGPNPTQN++KP +LRS
Subjt:  MKPLICKSLLPILYTFLLMFPLHLHTAALAARTLLP-------SSSS--RVGHLH-LPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
KAG7032911.1 hypothetical protein SDJN02_06961 [Cucurbita argyrosperma subsp. argyrosperma]9.3e-37100Show/hide
Query:  MKPLICKSLLPILYTFLLMFPLHLHTAALAARTLLPSSSSRVGHLHLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
        MKPLICKSLLPILYTFLLMFPLHLHTAALAARTLLPSSSSRVGHLHLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
Subjt:  MKPLICKSLLPILYTFLLMFPLHLHTAALAARTLLPSSSSRVGHLHLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS
TYK04416.1 uncharacterized protein E5676_scaffold409G00120 [Cucumis melo var. makuwa]1.2e-1254.63Show/hide
Query:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLPSSSSRVGHL-------------------HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNK
        MKPLI KSLL PIL+TFLL+ F  HLHT   AAR L P   S V                      HLP   RKL ET+SSTS+SLR+IP+SGPNPTQN+
Subjt:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLPSSSSRVGHL-------------------HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNK

Query:  LKPTKLRS
        +KP KLRS
Subjt:  LKPTKLRS
XP_011656590.1 uncharacterized protein LOC105435754 [Cucumis sativus]1.4e-1358.72Show/hide
Query:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLP-------------------SSSSRVGHL-HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQN
        MKPLI KSLL PILYTFLL+ F  HLHT   AAR LLP                   SSS +V  L HLP   RKL ET+SSTS+SLR+IP+SGPNPTQN
Subjt:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLP-------------------SSSSRVGHL-HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQN

Query:  KLKPTKLRS
        ++KP KLRS
Subjt:  KLKPTKLRS
TrEMBL top hitse value%identityAlignment
A0A5A7SNV6 Uncharacterized protein7.3e-1153Show/hide
Query:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLPSSSSRVGHL-------------------HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNK
        MKPLI KSLL PIL+TFLL+ F  HLHT   AAR L P   S V                      HLP   RKL ET+SSTS+SLR+IP+SGPNPTQN+
Subjt:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLPSSSSRVGHL-------------------HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNK
A0A5D3C1X0 Uncharacterized protein5.9e-1354.63Show/hide
Query:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLPSSSSRVGHL-------------------HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNK
        MKPLI KSLL PIL+TFLL+ F  HLHT   AAR L P   S V                      HLP   RKL ET+SSTS+SLR+IP+SGPNPTQN+
Subjt:  MKPLICKSLL-PILYTFLLM-FPLHLHTAALAARTLLPSSSSRVGHL-------------------HLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNK

Query:  LKPTKLRS
        +KP KLRS
Subjt:  LKPTKLRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTTTGATCTGCAAATCATTGCTTCCAATTCTCTACACTTTTCTACTGATGTTTCCTCTCCATCTTCACACTGCTGCTCTGGCTGCAAGAACGCTCCTCCCATC
GTCCTCGTCTCGAGTTGGTCATCTTCATCTACCTCTCACAGTTCGGAAGCTCCCCGAAACAGCATCGTCAACTTCCTCGAGCCTTCGCCAAATTCCTAAAAGCGGCCCGA
ATCCTACACAGAACAAATTGAAGCCAACAAAGTTGAGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
TATTTGTCTTTTGTTCTATCGACTGAATGTATTTTAACCAGTTGAGTTATGTTTAGATTGGCATGAGTCGGTTTTATCAAAGCTAATCGATAAATGGGTATATTTTCATG
TTCACAAGGGCATTTCGAACATTTTTTTTTTTAATACAAGGGTCTGATTCGTAAAATACACTACGTACGGGAGTGGTACGATCTGCGAAACATACAAAATACAGGGGTGT
AACTGGTAAGTATTCTGTTTAGTGAAACAAAGAAAGGCAGTTGAAGACAAAATTAGAAAAATTGTTGAATTATATAAGCAGGCAGACCACTAGTTGTTGGAGTTGCAAGA
CAAATAAGACATTGATTCTCTCAGAACTCACAAAAAAACATGAAACCTTTGATCTGCAAATCATTGCTTCCAATTCTCTACACTTTTCTACTGATGTTTCCTCTCCATCT
TCACACTGCTGCTCTGGCTGCAAGAACGCTCCTCCCATCGTCCTCGTCTCGAGTTGGTCATCTTCATCTACCTCTCACAGTTCGGAAGCTCCCCGAAACAGCATCGTCAA
CTTCCTCGAGCCTTCGCCAAATTCCTAAAAGCGGCCCGAATCCTACACAGAACAAATTGAAGCCAACAAAGTTGAGAAGCTAAATCTCAACGGAATCATCGAGACGAAGA
ACACAAACCCGATGTTGCAAGGAATCTCGAAGCCAACCATGGTAGCTTCCTTTTTATGCTGAGAAAAAAAAGATTCATAGCTATAGAAATACAGTACTACTGACTGTTAC
TACATACAATGATCTGATTAGAAAGTAGCTTCTTGTGTATGTGTATGTGTAGATCCTCAATGTTAATCAAGTTTTGATCTATTTCTTGAAGCCGAGTCGAGATCTCGTGT
TAAATCCGAGACTCGTTCCTATTAGATTCGAGCTCGATCCTTGTTCATAGCAGAAGATGATGAGTTATATAATGGAAAGGGATGAGAAGAAAAACTGTCCCTGAATGATA
TCATTTTCAAAACAGGTTAAATGATAATCTTATGGATGAGGGATGCCATAAAGTCTAATCCATACTTTATGGAGGGCCCAAACTTTGAGGGTTGGGCTAAGGCTGTTTGG
ATTTTATAAAGTTGTATACTTTATAATAATAATTCATATACACATGTCTCTGTCTTCAAATAATTTTGAACCCAATTTGTATAGGGAAGGGAGGAGACCTATATGGAGCG
GAGTTTACATTTACGCTCCGTGAAGCTATCGGTTTCAGGCTGCTTAGGACTGTTACGTTGCTAGTCTTTCAAAGTCGTTGGATCTTTTTACTCATTAAAGAATTTTCCTT
CTCCAATC
Protein sequenceShow/hide protein sequence
MKPLICKSLLPILYTFLLMFPLHLHTAALAARTLLPSSSSRVGHLHLPLTVRKLPETASSTSSSLRQIPKSGPNPTQNKLKPTKLRS