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Carg15844 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15844
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionchlorophyll(Ide) b reductase NOL, chloroplastic
Genome locationCarg_Chr04:19236628..19237160
RNA-Seq ExpressionCarg15844
SyntenyCarg15844
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031719.1 chlorophyll(ide) b reductase NOL [Cucumis melo var. makuwa]5.8e-0467.57Show/hide
Query:  APDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        A  LVNS+S+S K E FQQ+  M+PPYNVLI GSTKG
Subjt:  APDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

KAG6602240.1 hypothetical protein SDJN03_07473, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1785.96Show/hide
Query:  SSLSVKAEVFQQRGTMIPPYNVLIAGSTK--------GTWFEELPGWLFPLSFIKNL
        SSLSVKAEVFQQRGTMIPPYNVLIAGSTK        GTWFEELPGWLFPLSFIKNL
Subjt:  SSLSVKAEVFQQRGTMIPPYNVLIAGSTK--------GTWFEELPGWLFPLSFIKNL

XP_008456629.2 PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X1 [Cucumis melo]2.6e-0445.59Show/hide
Query:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        ++ SS + L +Y ++S        R      A  LVNS+S+S K E FQQ+  M+PPYNVLI GSTKG
Subjt:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

XP_016902022.1 PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X2 [Cucumis melo]2.6e-0445.59Show/hide
Query:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        ++ SS + L +Y ++S        R      A  LVNS+S+S K E FQQ+  M+PPYNVLI GSTKG
Subjt:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

XP_022134271.1 chlorophyll(ide) b reductase NOL, chloroplastic [Momordica charantia]2.0e-0475.76Show/hide
Query:  VNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        VNS S S+KAE+FQQR  M+PPYNVLI GSTKG
Subjt:  VNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

TrEMBL top hitse value%identityAlignment
A0A0A0KE83 Uncharacterized protein8.2e-0467.65Show/hide
Query:  LVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        +VNS+S+S K E FQQ+  M+PPYNVLI GSTKG
Subjt:  LVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

A0A1S3C3P2 chlorophyll(Ide) b reductase NOL, chloroplastic isoform X11.3e-0445.59Show/hide
Query:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        ++ SS + L +Y ++S        R      A  LVNS+S+S K E FQQ+  M+PPYNVLI GSTKG
Subjt:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

A0A1S4E1C1 chlorophyll(Ide) b reductase NOL, chloroplastic isoform X21.3e-0445.59Show/hide
Query:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        ++ SS + L +Y ++S        R      A  LVNS+S+S K E FQQ+  M+PPYNVLI GSTKG
Subjt:  VASSSSLLLPVYAYQS-----ANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

A0A5A7SR18 Chlorophyll(Ide) b reductase NOL2.8e-0467.57Show/hide
Query:  APDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        A  LVNS+S+S K E FQQ+  M+PPYNVLI GSTKG
Subjt:  APDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

A0A6J1BXF3 chlorophyll(Ide) b reductase NOL, chloroplastic9.7e-0575.76Show/hide
Query:  VNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        VNS S S+KAE+FQQR  M+PPYNVLI GSTKG
Subjt:  VNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04900.1 NYC1-like4.8e-0454.55Show/hide
Query:  VNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG
        V  SS +V+A +  +R  M PPYN+LI GSTKG
Subjt:  VNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTTCTTCTTCGTCTCTCCTCCTTCCGGTCTACGCCTATCAATCTGCAAATCGGAGATCTTTCGATTGGTGGTTCGCGCCAGATCTTGTGAATTCCAGTTCTCT
ATCCGTAAAGGCTGAAGTCTTTCAGCAGAGAGGGACTATGATTCCTCCTTATAATGTTTTGATCGCTGGCTCTACTAAAGGAACTTGGTTTGAGGAACTTCCTGGCTGGC
TCTTTCCTCTTAGTTTTATTAAGAATTTG
mRNA sequenceShow/hide mRNA sequence
TTTCCGTTCTCCTTCATCTCGCGTAATGGTGGCTTCTTCTTCGTCTCTCCTCCTTCCGGTCTACGCCTATCAATCTGCAAATCGGAGATCTTTCGATTGGTGGTTCGCGC
CAGATCTTGTGAATTCCAGTTCTCTATCCGTAAAGGCTGAAGTCTTTCAGCAGAGAGGGACTATGATTCCTCCTTATAATGTTTTGATCGCTGGCTCTACTAAAGGAACT
TGGTTTGAGGAACTTCCTGGCTGGCTCTTTCCTCTTAGTTTTATTAAGAATTTG
Protein sequenceShow/hide protein sequence
MVASSSSLLLPVYAYQSANRRSFDWWFAPDLVNSSSLSVKAEVFQQRGTMIPPYNVLIAGSTKGTWFEELPGWLFPLSFIKNL