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Carg15861 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15861
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein-like protein
Genome locationCarg_Chr08:6602717..6603897
RNA-Seq ExpressionCarg15861
SyntenyCarg15861
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581756.1 hypothetical protein SDJN03_21758, partial [Cucurbita argyrosperma subsp. sororia]1.6e-9499.46Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSSGKVRKADNVLELLNKDIHAEAPAFWMVSRELARVIGKGSTGDV
        KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGA+ANIWSSGKVRKADNVLELLNKDIHAEAPAFWMVSRELARVIGKGSTGDV
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSSGKVRKADNVLELLNKDIHAEAPAFWMVSRELARVIGKGSTGDV

KAG7026194.1 hypothetical protein SDJN02_12693, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-95100Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSSGKVRKADNVLELLNKDIHAEAPAFWMVSRELARVIGKGSTGDV
        KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSSGKVRKADNVLELLNKDIHAEAPAFWMVSRELARVIGKGSTGDV
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSSGKVRKADNVLELLNKDIHAEAPAFWMVSRELARVIGKGSTGDV

XP_022955496.1 uncharacterized protein LOC111457504 [Cucurbita moschata]8.8e-69100Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

XP_022980748.1 uncharacterized protein LOC111480022 [Cucurbita maxima]1.4e-6698.59Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        MADSNSPATQNSLPQDNNTATPMASS GAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGA+ANIWSS
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

XP_023527033.1 uncharacterized protein LOC111790380 [Cucurbita pepo subsp. pepo]1.7e-6798.59Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        MADSNSPATQNSL QDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGA+ANIWSS
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

TrEMBL top hitse value%identityAlignment
A0A1S4DV46 uncharacterized protein LOC1034875371.2e-5077.46Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        M DS SPA  NSLPQ  +  +P   S    RRK PSPQEL+SHYESQG TSHDASIKVI+DLQNAL +IISSGRGKKDKLL++TSRKIDATN+RLA+LDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        KLDSKPGYA+TFALGLASGSVLNG+G VMPHVFGA+ NIWSS
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

A0A5A7VAF7 Putative ribosomal-like protein1.2e-5077.46Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        M DS SPA  NSLPQ  +  +P   S    RRK PSPQEL+SHYESQG TSHDASIKVI+DLQNAL +IISSGRGKKDKLL++TSRKIDATN+RLA+LDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        KLDSKPGYA+TFALGLASGSVLNG+G VMPHVFGA+ NIWSS
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

A0A6J1D308 uncharacterized protein LOC1110168658.6e-5483.21Show/hide
Query:  SPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSK
        SP   NSLPQ N+TATPM+SS G QRRKLP+PQELVSHYESQGL SHDASIKVIEDLQNAL RI+SSGRGKKDKLLV+TS+KIDAT +R+AILDLKLDSK
Subjt:  SPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSK

Query:  PGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        PGYA+TFA+GLASGSVL G+G+VMPHVFGA+ANIWSS
Subjt:  PGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

A0A6J1GTX5 uncharacterized protein LOC1114575044.3e-69100Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

A0A6J1J075 uncharacterized protein LOC1114800226.8e-6798.59Show/hide
Query:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
        MADSNSPATQNSLPQDNNTATPMASS GAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL
Subjt:  MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDL

Query:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS
        KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGA+ANIWSS
Subjt:  KLDSKPGYAQTFALGLASGSVLNGIGAVMPHVFGAIANIWSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16790.1 ribosomal protein-related3.7e-3355.97Show/hide
Query:  PQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGR--GKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQT
        P   N A    S    + +K P+P EL+SHY+ +GL   +ASIKVIEDLQNALVR++SS R    KDKL+ D +RKIDA N RLA++D KL++KPGY +T
Subjt:  PQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGR--GKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQT

Query:  FALGLASGSVLNGIGAVMPHVFGAIANIWSSGKV
        FALGLASG+ LNGI AV PHV   I  IWS+ ++
Subjt:  FALGLASGSVLNGIGAVMPHVFGAIANIWSSGKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCAAATTCACCAGCGACCCAAAATTCCCTCCCCCAAGACAACAATACTGCAACTCCCATGGCGTCTTCAGGAGGAGCCCAAAGAAGAAAGCTTCCTTCCCC
ACAGGAACTCGTATCCCACTACGAATCCCAAGGCCTCACTTCTCACGATGCTTCAATCAAGGTAATCGAAGACCTTCAAAATGCTCTTGTAAGGATCATCTCCTCCGGCA
GAGGCAAGAAGGACAAGCTCCTGGTGGATACCTCAAGGAAGATCGACGCCACTAATACCCGTCTTGCCATTCTCGACCTAAAGTTGGACTCCAAGCCCGGCTATGCCCAG
ACTTTTGCCCTAGGCTTGGCTTCTGGATCTGTTTTGAATGGAATTGGCGCCGTGATGCCCCATGTTTTTGGGGCTATCGCCAATATTTGGAGCTCTGGGAAAGTGAGGAA
GGCTGACAATGTTTTAGAACTCTTGAACAAGGACATCCACGCAGAGGCTCCTGCTTTCTGGATGGTAAGCCGGGAGCTAGCTAGAGTGATTGGAAAGGGTAGTACAGGGG
ATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTCAAATTCACCAGCGACCCAAAATTCCCTCCCCCAAGACAACAATACTGCAACTCCCATGGCGTCTTCAGGAGGAGCCCAAAGAAGAAAGCTTCCTTCCCC
ACAGGAACTCGTATCCCACTACGAATCCCAAGGCCTCACTTCTCACGATGCTTCAATCAAGGTAATCGAAGACCTTCAAAATGCTCTTGTAAGGATCATCTCCTCCGGCA
GAGGCAAGAAGGACAAGCTCCTGGTGGATACCTCAAGGAAGATCGACGCCACTAATACCCGTCTTGCCATTCTCGACCTAAAGTTGGACTCCAAGCCCGGCTATGCCCAG
ACTTTTGCCCTAGGCTTGGCTTCTGGATCTGTTTTGAATGGAATTGGCGCCGTGATGCCCCATGTTTTTGGGGCTATCGCCAATATTTGGAGCTCTGGGAAAGTGAGGAA
GGCTGACAATGTTTTAGAACTCTTGAACAAGGACATCCACGCAGAGGCTCCTGCTTTCTGGATGGTAAGCCGGGAGCTAGCTAGAGTGATTGGAAAGGGTAGTACAGGGG
ATGTCTAA
Protein sequenceShow/hide protein sequence
MADSNSPATQNSLPQDNNTATPMASSGGAQRRKLPSPQELVSHYESQGLTSHDASIKVIEDLQNALVRIISSGRGKKDKLLVDTSRKIDATNTRLAILDLKLDSKPGYAQ
TFALGLASGSVLNGIGAVMPHVFGAIANIWSSGKVRKADNVLELLNKDIHAEAPAFWMVSRELARVIGKGSTGDV