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Carg15883 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15883
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRmlC-like cupins superfamily protein
Genome locationCarg_Chr08:6903874..6906310
RNA-Seq ExpressionCarg15883
SyntenyCarg15883
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593872.1 hypothetical protein SDJN03_13348, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3486.32Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLAVELFWIRFVLLEMLESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLEN
        MNDSNEDQRLPLHGNPKEFVSMDQLA  L           ESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLEN
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLAVELFWIRFVLLEMLESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLEN
KAG7026216.1 hypothetical protein SDJN02_12715, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-70100Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLAVELFWIRFVLLEMLESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLENDQAAK
        MNDSNEDQRLPLHGNPKEFVSMDQLAVELFWIRFVLLEMLESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLENDQAAK
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLAVELFWIRFVLLEMLESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLENDQAAK

Query:  IMKTHLGWEQYHYPIGAAKLKPAELGYNHASQLH
        IMKTHLGWEQYHYPIGAAKLKPAELGYNHASQLH
Subjt:  IMKTHLGWEQYHYPIGAAKLKPAELGYNHASQLH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
F6HDT7 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 27.5e-0476.92Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLA
        M+DS+EDQRLP H +PKEFVS+DQLA
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLA
Q8H185 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 49.8e-0466.67Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLAV--ELFW
        M+DSNEDQRLP H NPKE VS+D LA    L+W
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLAV--ELFW
Arabidopsis top hitse value%identityAlignment
AT4G14710.1 RmlC-like cupins superfamily protein4.5e-0469.23Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLA
        M+DS EDQRLP H +PKEF+S+D+LA
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLA
AT4G14710.2 RmlC-like cupins superfamily protein4.5e-0469.23Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLA
        M+DS EDQRLP H +PKEF+S+D+LA
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLA
AT4G14710.3 RmlC-like cupins superfamily protein4.5e-0469.23Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLA
        M+DS EDQRLP H +PKEF+S+D+LA
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLA
AT4G14716.1 acireductone dioxygenase 12.0e-0473.08Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLA
        M+DS EDQRLP H +PKEFVS+D+LA
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLA
AT5G43850.1 RmlC-like cupins superfamily protein6.9e-0566.67Show/hide
Query:  MNDSNEDQRLPLHGNPKEFVSMDQLAV--ELFW
        M+DSNEDQRLP H NPKE VS+D LA    L+W
Subjt:  MNDSNEDQRLPLHGNPKEFVSMDQLAV--ELFW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATAGCAATGAAGACCAGAGGCTTCCTCTTCATGGCAACCCTAAAGAGTTCGTCTCCATGGACCAATTAGCCGTCGAACTTTTTTGGATACGTTTCGTTCTTCT
TGAGATGTTGGAGAGCCCATTTGGACCCCGTTTAACCGACCACAAGGGCAGCATCCAGCAAGGAAAGAGTACCTCAACACCTTCACTGAGAAAGCTGGAGCGCCACTCCA
GGCTCATTAAAGACTTAAAGTTGCAGGGCTCTTGGAGATCAGAGACTCGTTTATCGCTGGAAAATGATCAAGCAGCTAAGATCATGAAAACACACCTGGGATGGGAACAA
TATCATTACCCTATAGGAGCAGCCAAGCTAAAGCCAGCTGAACTGGGATATAACCATGCTTCACAGCTACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGATAGCAATGAAGACCAGAGGCTTCCTCTTCATGGCAACCCTAAAGAGTTCGTCTCCATGGACCAATTAGCCGTCGAACTTTTTTGGATACGTTTCGTTCTTCT
TGAGATGTTGGAGAGCCCATTTGGACCCCGTTTAACCGACCACAAGGGCAGCATCCAGCAAGGAAAGAGTACCTCAACACCTTCACTGAGAAAGCTGGAGCGCCACTCCA
GGCTCATTAAAGACTTAAAGTTGCAGGGCTCTTGGAGATCAGAGACTCGTTTATCGCTGGAAAATGATCAAGCAGCTAAGATCATGAAAACACACCTGGGATGGGAACAA
TATCATTACCCTATAGGAGCAGCCAAGCTAAAGCCAGCTGAACTGGGATATAACCATGCTTCACAGCTACATTAG
Protein sequenceShow/hide protein sequence
MNDSNEDQRLPLHGNPKEFVSMDQLAVELFWIRFVLLEMLESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLENDQAAKIMKTHLGWEQ
YHYPIGAAKLKPAELGYNHASQLH