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Carg15888 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15888
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein IQ-DOMAIN 14
Genome locationCarg_Chr08:6931898..6934289
RNA-Seq ExpressionCarg15888
SyntenyCarg15888
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000048 - IQ motif, EF-hand binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593877.1 Protein IQ-DOMAIN 20, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5799.19Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV
        MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMD+DYEEQRQGLAIVV
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV

Query:  AKAAAADAAVAAAIKIQSVFRSYL
        AKAAAADAAVAAAIKIQSVFRSYL
Subjt:  AKAAAADAAVAAAIKIQSVFRSYL

KAG7026221.1 hypothetical protein SDJN02_12720, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-107100Show/hide
Query:  MGERRGDNRLKDEQQSKNSNGRHSPLTIRNQTRALEIAESLVIGVLGDGADYSREEEMGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIR
        MGERRGDNRLKDEQQSKNSNGRHSPLTIRNQTRALEIAESLVIGVLGDGADYSREEEMGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIR
Subjt:  MGERRGDNRLKDEQQSKNSNGRHSPLTIRNQTRALEIAESLVIGVLGDGADYSREEEMGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIR

Query:  HNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYLMVTIYQSPGDAVGKKSTQG
        HNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYLMVTIYQSPGDAVGKKSTQG
Subjt:  HNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYLMVTIYQSPGDAVGKKSTQG

Query:  IARIGEAAGTS
        IARIGEAAGTS
Subjt:  IARIGEAAGTS

XP_022930512.1 uncharacterized protein LOC111436944 [Cucurbita moschata]4.5e-5392.86Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV
        MGKTSKWL SFLTGKKDKEKEKRSSNQNFT+TSECPAT I IRHNPKEKKRWSFRRAT AVSRDSYPLEMVATTMPV AAAQAAMD+DYEEQRQGLAIVV
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV

Query:  AKAAAADAAVAAAIKIQSVFRSYLMV
        AKAAAADAAVAAAIKIQSVFRSYL +
Subjt:  AKAAAADAAVAAAIKIQSVFRSYLMV

XP_023000240.1 uncharacterized protein LOC111494521 [Cucurbita maxima]1.4e-5495.97Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV
        MGKT KWL SFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPV AA QAAMD+DYEEQRQGLAIVV
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV

Query:  AKAAAADAAVAAAIKIQSVFRSYL
        AKAAAADAAVAAAIKIQSVFRSYL
Subjt:  AKAAAADAAVAAAIKIQSVFRSYL

XP_023515088.1 uncharacterized protein LOC111779223 [Cucurbita pepo subsp. pepo]3.1e-5495.97Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV
        MGKTSKWL SFLTGKKDKEKEK SSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPV AAAQAA+D+DYEEQRQGLAIVV
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV

Query:  AKAAAADAAVAAAIKIQSVFRSYL
        AKAAAADAAVAAAIKIQSVFRSYL
Subjt:  AKAAAADAAVAAAIKIQSVFRSYL

TrEMBL top hitse value%identityAlignment
A0A0A0LIC5 DUF4005 domain-containing protein2.8e-3256.98Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVS-----RDS--YPLEMVATTMPV----------------
        MGKTSKWL +FLTGKKDKEKEK  SNQNF   SE PATPISIRHNPKEKKRWSFRR++ A +     RDS  +PLEMV+TTMPV                
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVS-----RDS--YPLEMVATTMPV----------------

Query:  VAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAV-------------------------AAAIKIQSVFRSYL
        +A A+AAMD+DYEE++Q +A+VVAKAAAADAA+                         AAAIKIQS FRSYL
Subjt:  VAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAV-------------------------AAAIKIQSVFRSYL

A0A1S3BLS5 uncharacterized protein LOC1034912361.1e-3156.4Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVS-----RDS--YPLEMVATTMPV----------------
        MGKTSKWL +FLTGKKDKEKEK  SNQN   +SE PATPISIRHNP+EKKRWSFRR++ A +     RDS  +PLEMV+TTMPV                
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVS-----RDS--YPLEMVATTMPV----------------

Query:  VAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAV-------------------------AAAIKIQSVFRSYL
        +A A+AAMD+DYEE+RQ +A+VVAKAAAADAA+                         AAAIKIQS+FRSYL
Subjt:  VAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAV-------------------------AAAIKIQSVFRSYL

A0A6J1C9Q1 protein IQ-DOMAIN 142.1e-3265.49Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTT-TSECPATPISIRHNPKEKKRWSFRRATTA--VSRD--SYPLEMVATTMPVVAAAQAAMDIDYEEQRQG
        MGKTSKWL +FL GKKDKEKEK  SNQNF+T +SE PATPISIRHNPKEK+RWSFRR++ A    RD  SYPLEMVATT+P+   AQAAMD+DYEE+RQ 
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTT-TSECPATPISIRHNPKEKKRWSFRRATTA--VSRD--SYPLEMVATTMPVVAAAQAAMDIDYEEQRQG

Query:  LAIVVAKAAAADAAV-------------AAAIKIQSVFRSYL
        LA+  AKAAA    +              AAIKIQSVFRSYL
Subjt:  LAIVVAKAAAADAAV-------------AAAIKIQSVFRSYL

A0A6J1EQR0 uncharacterized protein LOC1114369442.2e-5392.86Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV
        MGKTSKWL SFLTGKKDKEKEKRSSNQNFT+TSECPAT I IRHNPKEKKRWSFRRAT AVSRDSYPLEMVATTMPV AAAQAAMD+DYEEQRQGLAIVV
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV

Query:  AKAAAADAAVAAAIKIQSVFRSYLMV
        AKAAAADAAVAAAIKIQSVFRSYL +
Subjt:  AKAAAADAAVAAAIKIQSVFRSYLMV

A0A6J1KHT1 uncharacterized protein LOC1114945216.8e-5595.97Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV
        MGKT KWL SFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPV AA QAAMD+DYEEQRQGLAIVV
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVV

Query:  AKAAAADAAVAAAIKIQSVFRSYL
        AKAAAADAAVAAAIKIQSVFRSYL
Subjt:  AKAAAADAAVAAAIKIQSVFRSYL

SwissProt top hitse value%identityAlignment
A0A1P8B590 Protein IQ-DOMAIN 191.3e-0734.52Show/hide
Query:  LTIRNQTRA---LEIAESLVIGVLGDGADYSREEEMGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRR---------
        +T RNQT     + I+ SL    L +G    ++  MGKTSKW  S LTGKK++ KE           SEC  T  SI   PKEK+RWSFRR         
Subjt:  LTIRNQTRA---LEIAESLVIGVLGDGADYSREEEMGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRR---------

Query:  ATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYL
        A     +DS P        P +        +D E+++      +   +A +    AAIKIQ+ +RS+L
Subjt:  ATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYL

Arabidopsis top hitse value%identityAlignment
AT4G14750.1 IQ-domain 191.4e-0736.09Show/hide
Query:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRR---------ATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEE
        MGKTSKW  S LTGKK++ KE           SEC  T  SI   PKEK+RWSFRR         A     +DS P        P +        +D E+
Subjt:  MGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWSFRR---------ATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEE

Query:  QRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYL
        ++      +   +A +    AAIKIQ+ +RS+L
Subjt:  QRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAGAGAAGAGGCGATAATAGATTGAAGGATGAGCAGCAGAGCAAGAACAGCAATGGCCGCCATAGTCCTCTTACGATCAGAAACCAGACGCGTGCTCTTGAAAT
AGCCGAATCCCTCGTAATTGGGGTTTTAGGGGACGGCGCGGATTACTCGAGGGAGGAGGAGATGGGAAAGACAAGCAAATGGCTGTGGAGCTTTCTGACAGGGAAGAAAG
ACAAAGAGAAGGAAAAACGCTCGAGTAATCAGAATTTTACGACTACTTCTGAGTGTCCAGCCACCCCGATATCGATTCGACACAATCCTAAAGAGAAAAAAAGATGGAGT
TTCCGAAGGGCCACCACGGCGGTGTCGAGAGATTCATACCCTCTTGAGATGGTTGCCACAACAATGCCTGTTGTTGCAGCTGCACAGGCTGCAATGGATATTGATTATGA
AGAACAAAGACAAGGCTTGGCCATTGTAGTGGCAAAGGCTGCGGCAGCTGATGCTGCTGTGGCTGCTGCCATCAAGATTCAGTCAGTCTTCCGGTCTTATTTGATGGTTA
CCATTTACCAATCTCCTGGTGATGCTGTAGGCAAGAAAAGCACTCAGGGCATTGCGAGGATTGGTGAAGCTGCAGGCACTAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAGAGAAGAGGCGATAATAGATTGAAGGATGAGCAGCAGAGCAAGAACAGCAATGGCCGCCATAGTCCTCTTACGATCAGAAACCAGACGCGTGCTCTTGAAAT
AGCCGAATCCCTCGTAATTGGGGTTTTAGGGGACGGCGCGGATTACTCGAGGGAGGAGGAGATGGGAAAGACAAGCAAATGGCTGTGGAGCTTTCTGACAGGGAAGAAAG
ACAAAGAGAAGGAAAAACGCTCGAGTAATCAGAATTTTACGACTACTTCTGAGTGTCCAGCCACCCCGATATCGATTCGACACAATCCTAAAGAGAAAAAAAGATGGAGT
TTCCGAAGGGCCACCACGGCGGTGTCGAGAGATTCATACCCTCTTGAGATGGTTGCCACAACAATGCCTGTTGTTGCAGCTGCACAGGCTGCAATGGATATTGATTATGA
AGAACAAAGACAAGGCTTGGCCATTGTAGTGGCAAAGGCTGCGGCAGCTGATGCTGCTGTGGCTGCTGCCATCAAGATTCAGTCAGTCTTCCGGTCTTATTTGATGGTTA
CCATTTACCAATCTCCTGGTGATGCTGTAGGCAAGAAAAGCACTCAGGGCATTGCGAGGATTGGTGAAGCTGCAGGCACTAGCTAG
Protein sequenceShow/hide protein sequence
MGERRGDNRLKDEQQSKNSNGRHSPLTIRNQTRALEIAESLVIGVLGDGADYSREEEMGKTSKWLWSFLTGKKDKEKEKRSSNQNFTTTSECPATPISIRHNPKEKKRWS
FRRATTAVSRDSYPLEMVATTMPVVAAAQAAMDIDYEEQRQGLAIVVAKAAAADAAVAAAIKIQSVFRSYLMVTIYQSPGDAVGKKSTQGIARIGEAAGTS