CuGenDBv2

Gene ID	Carg15891
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S3a
Genome location	Carg_Chr08:6939274..6942129
RNA-Seq Expression	Carg15891
Synteny	Carg15891
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022138569.1 40S ribosomal protein S3a [Momordica charantia]

6.7e-139

98.46

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_022930511.1 40S ribosomal protein S3a-like [Cucurbita moschata]

2.1e-140

99.62

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_022959011.1 40S ribosomal protein S3a-like [Cucurbita moschata]

3.0e-139

98.85

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_023000239.1 40S ribosomal protein S3a-like [Cucurbita maxima]

3.2e-141

100

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

XP_023006746.1 40S ribosomal protein S3a-like [Cucurbita maxima]

6.0e-140

99.23

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CAG4 40S ribosomal protein S3a

3.2e-139

98.46

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1ER42 40S ribosomal protein S3a

1.0e-140

99.62

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1H3P8 40S ribosomal protein S3a

1.4e-139

98.85

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1KJB0 40S ribosomal protein S3a

1.5e-141

100

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

A0A6J1KYM2 40S ribosomal protein S3a

2.9e-140

99.23

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVE ATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

3.6e-127

88.12

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTD+YTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEEATEVVGA
        TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADE V E  TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEEATEVVGA

P33444 40S ribosomal protein S3a

2.5e-128

87.74

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTDSYTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPA+E V E TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEEATEVVGA

P49198 40S ribosomal protein S3a

5.5e-128

87.31

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+ TTDKLRSLV+KW +LIEAHVDVKTTD++TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPA+E   EATEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

Q285L8 40S ribosomal protein S3a

1.8e-126

87.74

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DP+AKKDWYDIKAPSVF++KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTDSYTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEA-TEVVGA
        TSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPADE V EA  E+ GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEA-TEVVGA

Q8GTE3 40S ribosomal protein S3a

5.0e-129

90.04

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTD+YTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEAT-EVVGA
        TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PADE V E T E+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEAT-EVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

2.0e-125

85.88

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAPS+F  +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTDSYTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEEATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPADE+ VEE TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEEATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

3.4e-125

86.26

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAP  F  +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEEATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKVDRPADE +VEE TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEEATEVVGA

Sequences

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CDS sequence

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ATGGCTGTCGGAAAGAACAAGAGGATTTCGAAAGGAAAGAAGGGAGGCAAGAAGAAGACTGTCGACCCATTTGCCAAGAAGGATTGGTACGATATCAAGGCACCTTCTGT
GTTCAATGTCAAGAACGTCGGGAAGACTCTCGTTACTCGCACTCAGGGTACCAAGATTGCCTCTGAGGGACTTAAACACCGTGTGTTTGAGGTATCCTTGGCTGACCTTC
AGGATGACGAGGAGCACGCCTACCGAAAGATTAGATTGAGAGCCGAAGATGTTCAAGGAAGGAATGTTCTGACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTG
AGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCTCATGTGGATGTTAAGACCACAGACAGCTATACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCC
AAACCAGGTTAAAAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGATTCGCCGAAAGATGAGGGAGATCATGGTAAACCAGGCAACGTCTTGTGATCTGAAAGAGT
TGGTTCGTAAGTTTATTCCTGAATCAATTGGAAAAGAAATCGAGAAGGCAACATCTAGCATATACCCTCTACAAAATGTTTTCATTCGGAAGGTCAAGATCTTGAAAGCT
CCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGCGATTATTCAGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCCGATGAAGTTGTCGAGGAGGCCACCGAAGT
TGTTGGGGCTTGA

mRNA sequence

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TATTTAAAGAGATGAAATTAGGGTTTTTGGCGCAGCCGTATCTCTCTCGATAGTTTTTCTTCCTCTGGAGCTGCTCTGAGCTTCCCAACTGGTCTAACCATGGCTGTCGG
AAAGAACAAGAGGATTTCGAAAGGAAAGAAGGGAGGCAAGAAGAAGACTGTCGACCCATTTGCCAAGAAGGATTGGTACGATATCAAGGCACCTTCTGTGTTCAATGTCA
AGAACGTCGGGAAGACTCTCGTTACTCGCACTCAGGGTACCAAGATTGCCTCTGAGGGACTTAAACACCGTGTGTTTGAGGTATCCTTGGCTGACCTTCAGGATGACGAG
GAGCACGCCTACCGAAAGATTAGATTGAGAGCCGAAGATGTTCAAGGAAGGAATGTTCTGACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTGAGGTCATTGGT
AAGGAAGTGGCATACGTTGATTGAAGCTCATGTGGATGTTAAGACCACAGACAGCTATACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCCAAACCAGGTTA
AAAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGATTCGCCGAAAGATGAGGGAGATCATGGTAAACCAGGCAACGTCTTGTGATCTGAAAGAGTTGGTTCGTAAG
TTTATTCCTGAATCAATTGGAAAAGAAATCGAGAAGGCAACATCTAGCATATACCCTCTACAAAATGTTTTCATTCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTTGA
TCTTGGAAAGTTGATGGAGGTTCATGGCGATTATTCAGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCCGATGAAGTTGTCGAGGAGGCCACCGAAGTTGTTGGGGCTT
GAAAATGGATTCTTGAATCAACTTTCTCATATTTACGAATGAACTGTGGCTTTTTGTTTTAGTTATAGTTGTATTACGCTTTCTGCTAAGTTGAGAAATCAGAGATAATC
AGCGATTTTGACTATGAAAAATACTTGCTGCTTTTAAGTTGAGTATTATTCCTTGGAACTATTTG

Protein sequence

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MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFNVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDSYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEEATEVVGA

Carg15891 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome