CuGenDBv2

Gene ID	Carg15930
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Genome location	Carg_Chr08:7182615..7183315
RNA-Seq Expression	Carg15930
Synteny	Carg15930
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR002885 - Pentatricopeptide repeat IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575019.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

9.5e-65

65.37

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVT+ASVMS CSH+GGIWNC ML+ALV+KLHF+  VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCVC S KDARRLF  M V N  S WNV+LKGYVK+GLVD+A ELF+    K++ISWATMID +VQVKQLREAL                MI+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ++
Subjt:  CGQAV

KAG7013592.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.5e-65

65.37

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVT+ASVMS CSH+GGIWNC ML+ALV+KLHF+  VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCVC S KDARRLF  M V N  S WNV+LKGYVK+GLVD+A ELF+    K++ISWATMID +VQVKQLREAL                MI+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ++
Subjt:  CGQAV

XP_022959003.1 pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita moschata]

2.5e-65

65.37

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Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYVKLR+L+NARQLFDKMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVT+ASVMS CSH+GGIWNC ML+ALV+KLHF+  VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCVC SLKDARRLF  M + N  S WNV+LKGYVK+GLVD+A ELF+    +++ISWATMID +VQVKQLREAL                MI+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ++
Subjt:  CGQAV

XP_023006214.1 pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita maxima]

1.9e-65

65.85

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Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVT+ASVMS CSH+GGIWNC ML+ALV+KLHF+  VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCVC SLKDARRLF  M V N  S WNV+LKGYVK+GLVD+A ELF+    K++ISWATMID +VQVKQLREAL                MI+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ++
Subjt:  CGQAV

XP_023548174.1 pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita pepo subsp. pepo]

2.1e-64

64.88

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Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYVKLR+L+NARQLFDKMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVT+ASVMS CSH+GGIWNC ML+ALV+KLHF+  VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCVC SLKDARRLF  M V N  S WNV+LKGYVK+ LVD+A ELF+    +++ISWATMID +V+VKQLREAL                MI+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ++
Subjt:  CGQAV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C877 pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X3

2.5e-63

63.9

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GY+KLR+L+NARQLF KMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVTMASVMS CSH+GGIWNC ML+ALV+KLHF   VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCV  SLKDA+RLF  M V N  S WNV+LKGYVK+GLVD+ARELFE    +++ SWATMID +VQ+K+LREAL                +I+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ+V
Subjt:  CGQAV

A0A1S4E227 pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1

2.5e-63

63.9

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Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GY+KLR+L+NARQLF KMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVTMASVMS CSH+GGIWNC ML+ALV+KLHF   VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCV  SLKDA+RLF  M V N  S WNV+LKGYVK+GLVD+ARELFE    +++ SWATMID +VQ+K+LREAL                +I+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ+V
Subjt:  CGQAV

A0A1S4E229 pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X2

2.5e-63

63.9

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GY+KLR+L+NARQLF KMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVTMASVMS CSH+GGIWNC ML+ALV+KLHF   VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCV  SLKDA+RLF  M V N  S WNV+LKGYVK+GLVD+ARELFE    +++ SWATMID +VQ+K+LREAL                +I+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ+V
Subjt:  CGQAV

A0A6J1H4P4 pentatricopeptide repeat-containing protein At5g19020, mitochondrial

1.2e-65

65.37

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYVKLR+L+NARQLFDKMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVT+ASVMS CSH+GGIWNC ML+ALV+KLHF+  VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCVC SLKDARRLF  M + N  S WNV+LKGYVK+GLVD+A ELF+    +++ISWATMID +VQVKQLREAL                MI+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ++
Subjt:  CGQAV

A0A6J1L1I9 pentatricopeptide repeat-containing protein At5g19020, mitochondrial

9.3e-66

65.85

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYVKLR+L+NAR LFDKMP+RGCVS+TTMILGL+QNDCW E    F       VAPNEVT+ASVMS CSH+GGIWNC ML+ALV+KLHF+  VLIST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA
        +MYCVC SLKDARRLF  M V N  S WNV+LKGYVK+GLVD+A ELF+    K++ISWATMID +VQVKQLREAL                MI+DL SA
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREAL----------------MIIDLASA

Query:  CGQAV
        CGQ++
Subjt:  CGQAV

SwissProt top hits

e value

%identity

Alignment

P0C8Q8 Pentatricopeptide repeat-containing protein At5g19020, mitochondrial

5.1e-45

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYV+ R L +A +LFD MP+R CVS+TT+I G +QN+ WSE    F    +L +  NEVT+A+V+S CSH+GGIW+C ML +L +KL     V +ST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREALMIIDLASACG
        +MYC+C  LKDAR+LF  M   N+  TWNV+L GY KAGL+++A ELF+    K+++SW TMID  ++  QL EAL+       CG
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREALMIIDLASACG

Q9CA54 Pentatricopeptide repeat-containing protein At1g74630

6.5e-16

29.35

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Query:  LCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE-FSHHHDL---SVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIST
        +  GY+K  EL++A+++F +MP R  VS++TMI+G++ N  ++E F +  +L    ++PNEV++  V+S CS  G      +L+  V K  +   V ++ 
Subjt:  LCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE-FSHHHDL---SVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIST

Query:  TLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFESKEMISWATMIDEYVQVKQLREALMIIDLASACGQAVPFYCGFLKEHN
         L+ MY  C ++  AR +F  M       +W  ++ G    G  +EA  LF   EM ++    D           +  I L  AC  A     G ++E  
Subjt:  TLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFESKEMISWATMIDEYVQVKQLREALMIIDLASACGQAVPFYCGFLKEHN

Query:  D
        D
Subjt:  D

Q9SUH6 Pentatricopeptide repeat-containing protein At4g30700

5.9e-17

34.09

Show/hide

Query:  VMEVLPMAGCCL-IRVLSWILYVVTLCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQN----DCWSEFSHHHDLSVAPNEVTMASVMSDCSHMG
        +M +  + G CL    LS       L   Y KL E+++AR+LFD+ P++   S+  MI G +QN    D  S F        +PN VT+  ++S C+ +G
Subjt:  VMEVLPMAGCCL-IRVLSWILYVVTLCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQN----DCWSEFSHHHDLSVAPNEVTMASVMSDCSHMG

Query:  GIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELF
         +     ++ LV    F S + +ST L+ MY  C S+ +ARRLF  M+  N   TWN ++ GY   G   EA  +F
Subjt:  GIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELF

Q9SY02 Pentatricopeptide repeat-containing protein At4g02750

3.4e-17

31.64

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIS-TTLLYMY
        GYV+ R L  AR+LF+ MP+R   S+ TM+ G +QN C  +     D     N+V+  +++S       + N  M  A ++     +  L+S   LL  +
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIS-TTLLYMY

Query:  CVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFES---KEMISWATMIDEYVQVKQLREALMIID
             + +AR+ F +M+V +V S WN I+ GY ++G +DEAR+LF+    +++ +W  M+  Y+Q + + EA  + D
Subjt:  CVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFES---KEMISWATMIDEYVQVKQLREALMIID

Q9ZUT4 Pentatricopeptide repeat-containing protein At2g37320

7.6e-17

34.97

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Query:  ELDNARQLFDKMPDRGCVSFTTMILGLSQ----NDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVC
        E++NA ++F++MP+R  VS+T MI G +Q    + C   +S     +  PN+ T  +++S C+  G +     ++   + +   S++ IS +L+ MYC C
Subjt:  ELDNARQLFDKMPDRGCVSFTTMILGLSQ----NDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVC

Query:  PSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE
          LKDA R+F   S  +V S WN ++ GY + GL  +A ELFE
Subjt:  PSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE

Arabidopsis top hits

e value

%identity

Alignment

AT1G74630.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.6e-17

29.35

Show/hide

Query:  LCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE-FSHHHDL---SVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIST
        +  GY+K  EL++A+++F +MP R  VS++TMI+G++ N  ++E F +  +L    ++PNEV++  V+S CS  G      +L+  V K  +   V ++ 
Subjt:  LCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE-FSHHHDL---SVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIST

Query:  TLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFESKEMISWATMIDEYVQVKQLREALMIIDLASACGQAVPFYCGFLKEHN
         L+ MY  C ++  AR +F  M       +W  ++ G    G  +EA  LF   EM ++    D           +  I L  AC  A     G ++E  
Subjt:  TLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFESKEMISWATMIDEYVQVKQLREALMIIDLASACGQAVPFYCGFLKEHN

Query:  D
        D
Subjt:  D

AT2G37320.1 Tetratricopeptide repeat (TPR)-like superfamily protein

5.4e-18

34.97

Show/hide

Query:  ELDNARQLFDKMPDRGCVSFTTMILGLSQ----NDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVC
        E++NA ++F++MP+R  VS+T MI G +Q    + C   +S     +  PN+ T  +++S C+  G +     ++   + +   S++ IS +L+ MYC C
Subjt:  ELDNARQLFDKMPDRGCVSFTTMILGLSQ----NDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVC

Query:  PSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE
          LKDA R+F   S  +V S WN ++ GY + GL  +A ELFE
Subjt:  PSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.4e-18

31.64

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIS-TTLLYMY
        GYV+ R L  AR+LF+ MP+R   S+ TM+ G +QN C  +     D     N+V+  +++S       + N  M  A ++     +  L+S   LL  +
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLIS-TTLLYMY

Query:  CVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFES---KEMISWATMIDEYVQVKQLREALMIID
             + +AR+ F +M+V +V S WN I+ GY ++G +DEAR+LF+    +++ +W  M+  Y+Q + + EA  + D
Subjt:  CVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFES---KEMISWATMIDEYVQVKQLREALMIID

AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein

4.2e-18

34.09

Show/hide

Query:  VMEVLPMAGCCL-IRVLSWILYVVTLCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQN----DCWSEFSHHHDLSVAPNEVTMASVMSDCSHMG
        +M +  + G CL    LS       L   Y KL E+++AR+LFD+ P++   S+  MI G +QN    D  S F        +PN VT+  ++S C+ +G
Subjt:  VMEVLPMAGCCL-IRVLSWILYVVTLCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQN----DCWSEFSHHHDLSVAPNEVTMASVMSDCSHMG

Query:  GIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELF
         +     ++ LV    F S + +ST L+ MY  C S+ +ARRLF  M+  N   TWN ++ GY   G   EA  +F
Subjt:  GIWNCWMLNALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELF

AT5G19020.1 mitochondrial editing factor 18

3.6e-46

Show/hide

Query:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL
        GYV+ R L +A +LFD MP+R CVS+TT+I G +QN+ WSE    F    +L +  NEVT+A+V+S CSH+GGIW+C ML +L +KL     V +ST LL
Subjt:  GYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSE----FSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLNALVVKLHFVSHVLISTTLL

Query:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREALMIIDLASACG
        +MYC+C  LKDAR+LF  M   N+  TWNV+L GY KAGL+++A ELF+    K+++SW TMID  ++  QL EAL+       CG
Subjt:  YMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFE---SKEMISWATMIDEYVQVKQLREALMIIDLASACG

Sequences

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CDS sequence

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ATGATTGTTGGAGTTAAAGTAATGGAAGTTCTACCGATGGCAGGTTGTTGTTTGATTCGCGTTCTAAGCTGGATTCTGTATGTTGTAACATTATGTTGTGGGTATGTAAA
ACTTCGCGAATTGGACAATGCCCGCCAGTTGTTCGACAAAATGCCTGACAGAGGATGCGTCTCTTTCACCACCATGATTTTGGGTTTGTCACAAAATGATTGTTGGAGTG
AATTCTCACACCACCATGATTTGAGTGTGGCCCCAAATGAAGTGACAATGGCAAGTGTTATGTCAGATTGTTCACATATGGGTGGGATTTGGAATTGCTGGATGCTCAAT
GCACTGGTCGTAAAGTTACATTTCGTTAGTCATGTTCTTATTTCAACGACTTTGCTGTACATGTATTGTGTTTGTCCAAGTTTAAAAGATGCCAGGAGATTGTTCCGTGC
AATGTCAGTTCATAACGTCGCTTCGACGTGGAATGTGATATTAAAAGGTTACGTAAAAGCTGGCCTTGTTGATGAAGCAAGAGAGCTGTTTGAAAGTAAAGAGATGATTT
CTTGGGCTACAATGATTGATGAGTATGTGCAAGTGAAACAGTTAAGGGAAGCTTTGATGATTATCGATTTGGCTTCTGCTTGTGGGCAGGCAGTTCCATTCTATTGTGGG
TTTCTCAAAGAACATAATGATTGA

mRNA sequence

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Protein sequence

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MIVGVKVMEVLPMAGCCLIRVLSWILYVVTLCCGYVKLRELDNARQLFDKMPDRGCVSFTTMILGLSQNDCWSEFSHHHDLSVAPNEVTMASVMSDCSHMGGIWNCWMLN
ALVVKLHFVSHVLISTTLLYMYCVCPSLKDARRLFRAMSVHNVASTWNVILKGYVKAGLVDEARELFESKEMISWATMIDEYVQVKQLREALMIIDLASACGQAVPFYCG
FLKEHND

Carg15930 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome