; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15938 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15938
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box domain-containing protein
Genome locationCarg_Chr08:7238506..7240960
RNA-Seq ExpressionCarg15938
SyntenyCarg15938
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0010225 - response to UV-C (biological process)
GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily
IPR041567 - COI1, F-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593928.1 F-box/LRR-repeat protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.6e-171100Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

KAG7026269.1 F-box/LRR-repeat protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-171100Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

XP_022930250.1 F-box/LRR-repeat protein 4 isoform X2 [Cucurbita moschata]2.3e-17099.34Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PFNSH+ATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELA GCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

XP_023000156.1 F-box/LRR-repeat protein 4 isoform X1 [Cucurbita maxima]2.3e-17099.34Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFV LLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PFNSH+ATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

XP_023514735.1 LOW QUALITY PROTEIN: F-box/LRR-repeat protein 4-like [Cucurbita pepo subsp. pepo]1.0e-17099.34Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PFNSH+ATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLES+SLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

TrEMBL top hitse value%identityAlignment
A0A6J1CA51 F-box/LRR-repeat protein 46.0e-15389.84Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGH WINT LPDELI+EIFRCLDSKLSRDACSLVC+RWLKLERLSRTTLRIGATGSP+LFVQLLA RFVN++NVHIDERLAISLP H GRRRRNE    
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
            H ATD TG+EG LESS LSDAGLIALSVGFPNL KLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGD+GVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELA GCGKSLKTFGI ACAKITD+SLEAVGMHCKYLESL+LDSE+IHNKGVLSVAQGCPLLKVLKLQCTNVTDEALV+VGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

A0A6J1EWG3 F-box/LRR-repeat protein 4 isoform X21.1e-17099.34Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PFNSH+ATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELA GCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

A0A6J1H3K1 F-box/LRR-repeat protein 4-like2.7e-15388.85Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGH WINT+LPDELI+EIFR LDSKLSRDACSLVC+RWLKLERLSRTTLRIGATGSP+LFVQLLARRFVN++NVHIDERLAISLPLHSGRRRRNEVM L
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PF SH+A  NTG EGA ESS LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKC+FLKSLDLQGCYVGD+GVAAVG FCK L+DVN RFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        D GLVEL+RGCGKSLK+FG+ ACAKITDV+LEAVGMHCKYLES+SLDSE+IH+KGVLS+AQGC LLKVLKLQCTNVTDEALVAVGSLCP LELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

A0A6J1KF37 F-box/LRR-repeat protein 4 isoform X11.1e-17099.34Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFV LLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PFNSH+ATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

A0A6J1KVN5 LOW QUALITY PROTEIN: F-box/LRR-repeat protein 4-like7.1e-15489.18Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL
        MRGH WINT+LPDELI+EIFRCLDSKLSRDACSLVC+RWLKLERLSRTTLRIGATGSP+LFVQLLARRFVN++NVHIDERLAISLPLHSGRRRRN+ M L
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCL

Query:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT
        PF SH+AT NTG EGA ESS LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKC+FLKSLDLQGCYVGD+GVAAVG FCK L+DVN RFCEGLT
Subjt:  PFNSHNATDNTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLT

Query:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ
        D GLVEL+RGCGKSLK+FG+ ACAKITDVSLEAVGMHCKYLES+SLDSE+IH+KGVLS+AQGC LLKVLKLQCTNVTDEALVAVGSLCP LELLALYSFQ
Subjt:  DTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQ

Query:  EFTDK
        EFTDK
Subjt:  EFTDK

SwissProt top hitse value%identityAlignment
Q58DG6 F-box/LRR-repeat protein 203.0e-2433.33Show/hide
Query:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI
        +++  L ALS G P LE+L++ WC  ++  G+ +L   C  LK+L L+GC  + D+ +  +G  C +L  +NL+ C  +TD GL+ + RGC K L++   
Subjt:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI

Query:  TACAKITDVSLEAVGMHCKYLESLSL-DSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTD
        + C+ ITD  L A+G +C  L  L +     + + G  ++A+ C  L+ + L +C  +TD  L+ +   CP L++L+L   +  TD
Subjt:  TACAKITDVSLEAVGMHCKYLESLSL-DSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTD

Q5R3Z8 F-box/LRR-repeat protein 21.7e-2432.8Show/hide
Query:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI
        ++++ L  +S G  NLE L+L WC  I+  G+ +L   CR LK+L L+GC  + D+ +  +  +C +L  +NL+ C  +TD G+V++ RGC + L+   +
Subjt:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI

Query:  TACAKITDVSLEAVGMHCKYLESL-SLDSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTD
        + C+ +TD SL A+G++C  L+ L +     + + G   +A+ C  L+ + L +C  +TD  L+ +   CP L+ L+L   +  TD
Subjt:  TACAKITDVSLEAVGMHCKYLESL-SLDSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTD

Q8BH16 F-box/LRR-repeat protein 21.7e-2433.16Show/hide
Query:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI
        ++++ L  +S G  NLE L+L WC  I+ +G+ +L   CR LK+L L+GC  + D+ +  +   C +L  +NL+ C  +TD G+V++ RGC + L+   +
Subjt:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI

Query:  TACAKITDVSLEAVGMHCKYLESL-SLDSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTDK
        + C+ +TD SL A+G++C  L+ L +     + + G   +A+ C  L+ + L +C  +TD  LV +   CP L+ L+L   +  TD+
Subjt:  TACAKITDVSLEAVGMHCKYLESL-SLDSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTDK

Q9C5D2 F-box/LRR-repeat protein 47.4e-10865.27Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLP--LHSGRRRRNEVM
        MRGH  IN  LP+ELI+EIFR L+SK +RDACSLVCKRWL LER SRTTLRIGA+ SP+ F+ LL+RRF+ I ++H+DER+++SLP    S +R+R    
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLP--LHSGRRRRNEVM

Query:  CLPFNS--HNATDNT--GAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLR
          P +S     TD T  GAE  +ESS L+D GL AL+ GFP +E LSLIWC N+SS GL SLA+KC  LKSLDLQGCYVGDQG+AAVG+FCKQLE++NLR
Subjt:  CLPFNS--HNATDNT--GAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLR

Query:  FCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELL
        FCEGLTD G+++L  GC KSLK+ G+ A AKITD+SLEAVG HCK LE L LDSE IH+KG+++VAQGC  LK LKLQC +VTD A  AVG LC SLE L
Subjt:  FCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELL

Query:  ALYSFQEFTDK
        ALYSFQ FTDK
Subjt:  ALYSFQEFTDK

Q9UKC9 F-box/LRR-repeat protein 21.7e-2432.8Show/hide
Query:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI
        ++++ L  +S G  NLE L+L WC  I+  G+ +L   CR LK+L L+GC  + D+ +  +  +C +L  +NL+ C  +TD G+V++ RGC + L+   +
Subjt:  LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI

Query:  TACAKITDVSLEAVGMHCKYLESL-SLDSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTD
        + C+ +TD SL A+G++C  L+ L +     + + G   +A+ C  L+ + L +C  +TD  L+ +   CP L+ L+L   +  TD
Subjt:  TACAKITDVSLEAVGMHCKYLESL-SLDSEIIHNKGVLSVAQGCPLLKVLKL-QCTNVTDEALVAVGSLCPSLELLALYSFQEFTD

Arabidopsis top hitse value%identityAlignment
AT1G77000.1 RNI-like superfamily protein1.7e-2229.93Show/hide
Query:  LPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIG-ATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLPFNSHNATD
        +P EL+++I   +D +    A S +C  W     L  T L +     +    V  LA +FV ++         + L     +   N V  +  + H   D
Subjt:  LPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIG-ATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLPFNSHNATD

Query:  NTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCY--VGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVEL
                +SS ++D  L +L+ G  NL KL+L  C++ S   L  L   CR LK L+L GC   V D  + A+GE C QL+ +NL +CE ++D G++ L
Subjt:  NTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCY--VGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVEL

Query:  ARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSL-DSEIIHNKGVLSVAQGCPL------------------LKVLKL-QCTNVTDEALVAVGSL
        A GC   L+T  + +C  ITD S+ A+   C +L SL L     I ++ + S+AQ                      L+ L + QCT +T  A+ AV   
Subjt:  ARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSL-DSEIIHNKGVLSVAQGCPL------------------LKVLKL-QCTNVTDEALVAVGSL

Query:  CPSL
         P+L
Subjt:  CPSL

AT1G77000.2 RNI-like superfamily protein1.7e-2229.93Show/hide
Query:  LPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIG-ATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLPFNSHNATD
        +P EL+++I   +D +    A S +C  W     L  T L +     +    V  LA +FV ++         + L     +   N V  +  + H   D
Subjt:  LPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIG-ATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLPFNSHNATD

Query:  NTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCY--VGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVEL
                +SS ++D  L +L+ G  NL KL+L  C++ S   L  L   CR LK L+L GC   V D  + A+GE C QL+ +NL +CE ++D G++ L
Subjt:  NTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCY--VGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVEL

Query:  ARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSL-DSEIIHNKGVLSVAQGCPL------------------LKVLKL-QCTNVTDEALVAVGSL
        A GC   L+T  + +C  ITD S+ A+   C +L SL L     I ++ + S+AQ                      L+ L + QCT +T  A+ AV   
Subjt:  ARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSL-DSEIIHNKGVLSVAQGCPL------------------LKVLKL-QCTNVTDEALVAVGSL

Query:  CPSL
         P+L
Subjt:  CPSL

AT2G25490.1 EIN3-binding F box protein 11.5e-2329.47Show/hide
Query:  ILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLE---RLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLPFNSHN
        +LPDE + EIFR L     R AC+ V K+WL L    R     +    T   +     L+R     +    D RLA      +GR    ++     NS  
Subjt:  ILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLE---RLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLPFNSHN

Query:  ATD-----------NTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLR
         +D           + G+      S ++D GL+ ++ G   LEKL L  CS I+ +GL ++A+ C  L  L L+ C  +GD+G+ A+   C +L+ V+++
Subjt:  ATD-----------NTGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEFCKQLEDVNLR

Query:  FCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDS-EIIHNKGVLSVAQGCPLLKVLKL---QCTNVTDEALVAVGSLCPS
         C  + D G+  L      SL    +     +TDVSL  VG +   +  L L     +  KG   +  G  L K+  L    C  VTD  L +VG  CP+
Subjt:  FCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDS-EIIHNKGVLSVAQGCPLLKVLKL---QCTNVTDEALVAVGSLCPS

Query:  LE
        ++
Subjt:  LE

AT4G15475.1 F-box/RNI-like superfamily protein5.3e-10965.27Show/hide
Query:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLP--LHSGRRRRNEVM
        MRGH  IN  LP+ELI+EIFR L+SK +RDACSLVCKRWL LER SRTTLRIGA+ SP+ F+ LL+RRF+ I ++H+DER+++SLP    S +R+R    
Subjt:  MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLP--LHSGRRRRNEVM

Query:  CLPFNS--HNATDNT--GAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLR
          P +S     TD T  GAE  +ESS L+D GL AL+ GFP +E LSLIWC N+SS GL SLA+KC  LKSLDLQGCYVGDQG+AAVG+FCKQLE++NLR
Subjt:  CLPFNS--HNATDNT--GAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLR

Query:  FCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELL
        FCEGLTD G+++L  GC KSLK+ G+ A AKITD+SLEAVG HCK LE L LDSE IH+KG+++VAQGC  LK LKLQC +VTD A  AVG LC SLE L
Subjt:  FCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELL

Query:  ALYSFQEFTDK
        ALYSFQ FTDK
Subjt:  ALYSFQEFTDK

AT5G23340.1 RNI-like superfamily protein9.8e-3130.03Show/hide
Query:  INTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLP-----
        +N  L D+ +  +   LDS   ++   LVCKRWL L+   R   ++ A   P + ++ LA RF  I  V +D   +IS   + G    +  +        
Subjt:  INTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLP-----

Query:  --FNSHNATDNTGAEGA-----------LESSY---LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEF
           N HN    T    A           L+ SY   LSD GL A++ G  +L  L L  C  I+ + L SL+E+CR L++L LQGC  + D G+A + + 
Subjt:  --FNSHNATDNTGAEGA-----------LESSY---LSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGC-YVGDQGVAAVGEF

Query:  CKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDS-EIIHNKGVLSVAQGC-PLLKVLKLQ-CTNVTDEAL
        C++++ +++  C  + D G+  +A+ C  SLKT  +  C K+ + S+ ++   CK LE+L +     I ++ ++ +A  C   LK L++  C N++D +L
Subjt:  CKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGITACAKITDVSLEAVGMHCKYLESLSLDS-EIIHNKGVLSVAQGC-PLLKVLKLQ-CTNVTDEAL

Query:  VAVGSLCPSLELLALYSFQEFTD
          +   C +LE L +   +E TD
Subjt:  VAVGSLCPSLELLALYSFQEFTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGGCCATGCTTGGATCAATACCATTCTTCCTGATGAGCTGATCATTGAGATCTTCCGGTGCCTTGACTCCAAGCTGAGTCGCGATGCTTGTTCTCTCGTCTGCAA
GCGTTGGCTCAAACTCGAGCGACTCAGCCGAACCACTCTACGAATTGGCGCAACTGGTAGTCCTGAGCTCTTTGTTCAGCTCCTTGCTCGCCGTTTTGTCAATATCAGAA
ATGTCCACATTGACGAACGCTTGGCGATTTCTCTCCCCCTTCATTCAGGAAGAAGACGTCGCAATGAAGTCATGTGCTTGCCATTTAACTCACACAATGCAACTGATAAT
ACTGGGGCTGAAGGTGCGCTGGAGTCTTCTTATCTGTCAGATGCTGGGCTAATTGCTCTCTCCGTAGGTTTTCCAAATCTGGAGAAACTGAGCTTAATTTGGTGCTCTAA
CATTTCAAGTCAGGGTTTAACATCCCTTGCTGAGAAGTGTAGGTTTTTGAAGTCGCTGGATCTACAGGGTTGCTATGTTGGGGACCAAGGTGTTGCTGCAGTTGGGGAAT
TCTGTAAACAACTTGAAGATGTAAATTTGCGTTTTTGTGAAGGGTTGACTGATACTGGTTTGGTTGAATTAGCACGTGGTTGTGGGAAATCATTGAAAACATTTGGTATT
ACAGCCTGTGCCAAAATAACGGATGTCTCATTAGAAGCTGTGGGTATGCACTGCAAATATCTGGAGTCTTTGTCGCTAGATTCGGAAATTATCCACAACAAAGGAGTGCT
TTCTGTAGCCCAAGGATGCCCACTTTTGAAAGTCTTGAAGCTACAGTGTACAAATGTCACAGATGAAGCTTTGGTAGCTGTAGGCTCCTTATGTCCTTCACTGGAATTAT
TGGCTTTATACAGTTTTCAAGAATTTACCGACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGGCCATGCTTGGATCAATACCATTCTTCCTGATGAGCTGATCATTGAGATCTTCCGGTGCCTTGACTCCAAGCTGAGTCGCGATGCTTGTTCTCTCGTCTGCAA
GCGTTGGCTCAAACTCGAGCGACTCAGCCGAACCACTCTACGAATTGGCGCAACTGGTAGTCCTGAGCTCTTTGTTCAGCTCCTTGCTCGCCGTTTTGTCAATATCAGAA
ATGTCCACATTGACGAACGCTTGGCGATTTCTCTCCCCCTTCATTCAGGAAGAAGACGTCGCAATGAAGTCATGTGCTTGCCATTTAACTCACACAATGCAACTGATAAT
ACTGGGGCTGAAGGTGCGCTGGAGTCTTCTTATCTGTCAGATGCTGGGCTAATTGCTCTCTCCGTAGGTTTTCCAAATCTGGAGAAACTGAGCTTAATTTGGTGCTCTAA
CATTTCAAGTCAGGGTTTAACATCCCTTGCTGAGAAGTGTAGGTTTTTGAAGTCGCTGGATCTACAGGGTTGCTATGTTGGGGACCAAGGTGTTGCTGCAGTTGGGGAAT
TCTGTAAACAACTTGAAGATGTAAATTTGCGTTTTTGTGAAGGGTTGACTGATACTGGTTTGGTTGAATTAGCACGTGGTTGTGGGAAATCATTGAAAACATTTGGTATT
ACAGCCTGTGCCAAAATAACGGATGTCTCATTAGAAGCTGTGGGTATGCACTGCAAATATCTGGAGTCTTTGTCGCTAGATTCGGAAATTATCCACAACAAAGGAGTGCT
TTCTGTAGCCCAAGGATGCCCACTTTTGAAAGTCTTGAAGCTACAGTGTACAAATGTCACAGATGAAGCTTTGGTAGCTGTAGGCTCCTTATGTCCTTCACTGGAATTAT
TGGCTTTATACAGTTTTCAAGAATTTACCGACAAGTAA
Protein sequenceShow/hide protein sequence
MRGHAWINTILPDELIIEIFRCLDSKLSRDACSLVCKRWLKLERLSRTTLRIGATGSPELFVQLLARRFVNIRNVHIDERLAISLPLHSGRRRRNEVMCLPFNSHNATDN
TGAEGALESSYLSDAGLIALSVGFPNLEKLSLIWCSNISSQGLTSLAEKCRFLKSLDLQGCYVGDQGVAAVGEFCKQLEDVNLRFCEGLTDTGLVELARGCGKSLKTFGI
TACAKITDVSLEAVGMHCKYLESLSLDSEIIHNKGVLSVAQGCPLLKVLKLQCTNVTDEALVAVGSLCPSLELLALYSFQEFTDK