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Carg15949 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15949
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLow-density receptor-like protein
Genome locationCarg_Chr08:7297338..7297923
RNA-Seq ExpressionCarg15949
SyntenyCarg15949
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593936.1 hypothetical protein SDJN03_13412, partial [Cucurbita argyrosperma subsp. sororia]3.5e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
XP_022930336.1 uncharacterized protein LOC111436812 isoform X1 [Cucurbita moschata]3.5e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
XP_022930337.1 uncharacterized protein LOC111436812 isoform X2 [Cucurbita moschata]3.5e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
XP_022930338.1 uncharacterized protein LOC111436812 isoform X3 [Cucurbita moschata]3.5e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
XP_022930339.1 uncharacterized protein LOC111436812 isoform X4 [Cucurbita moschata]3.5e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
TrEMBL top hitse value%identityAlignment
A0A6J1EQ68 uncharacterized protein LOC111436812 isoform X21.7e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
A0A6J1EQN0 uncharacterized protein LOC111436812 isoform X11.7e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
A0A6J1ER65 uncharacterized protein LOC111436812 isoform X41.7e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
A0A6J1EUV5 uncharacterized protein LOC111436812 isoform X31.7e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
A0A6J1EWN5 uncharacterized protein LOC111436812 isoform X51.7e-42100Show/hide
Query:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
        MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
Subjt:  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein9.0e-2865.56Show/hide
Query:  ASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLL
        +S   RI FR V+++ L++V+FYVGRPLYWKISAT+HDIR NKQ+V+EG SQIV EAQ+SVGWYHDESDSG  +G   KK+G   +RRLL
Subjt:  ASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGGCAGCTAGGATTACGTTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGT
CCATGACATTCGCCAGAACAAACAGACCGTCAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGATGGAACTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAATCATTAAATGGAAAAATAGAAACAGATATTTTTTTCCGATATATATATACCCTTTGTGAGAACCCGCTGAACAACTCTTCCTTTTGCCTGATCGAACCATTTC
AACTGCATAGCGGGAATCTCTATGCTCTGGTAGATCACAGTTTTTCTCGCTCTCTTTCTCTCTGTTTCTCTCTGTTTCTCTCTGCAAGACAAAGCCACCGGAAGCAATGG
CGTCGTCGGCAGCTAGGATTACGTTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGTCCAT
GACATTCGCCAGAACAAACAGACCGTCAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCCATGA
TGGAACTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAG
Protein sequenceShow/hide protein sequence
MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRQNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGTDGKKAGSVAARRLLHQ