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Carg15968 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15968
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCW-type domain-containing protein
Genome locationCarg_Chr08:7422108..7423581
RNA-Seq ExpressionCarg15968
SyntenyCarg15968
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011124 - Zinc finger, CW-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593958.1 hypothetical protein SDJN03_13434, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6064.49Show/hide
Query:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------
        DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH                   
Subjt:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------

Query:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
          R   G                    KT+ + + V+P+ + P               CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
Subjt:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE

Query:  TTEKLLMLLYQALP
        TTEKL  L    LP
Subjt:  TTEKLLMLLYQALP
KAG7026298.1 hypothetical protein SDJN02_12799, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-141100Show/hide
Query:  MGGHLTITSSREPTWVVKKRKTASRNQIRAFSRKNKKNGGRSIATNRDATVTSWYCIEGERRKEAEVLNLADPQKKKLSCKTTLHKAETDTDKGSIKKEK
        MGGHLTITSSREPTWVVKKRKTASRNQIRAFSRKNKKNGGRSIATNRDATVTSWYCIEGERRKEAEVLNLADPQKKKLSCKTTLHKAETDTDKGSIKKEK
Subjt:  MGGHLTITSSREPTWVVKKRKTASRNQIRAFSRKNKKNGGRSIATNRDATVTSWYCIEGERRKEAEVLNLADPQKKKLSCKTTLHKAETDTDKGSIKKEK

Query:  SEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRHRAFSGKTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPF
        SEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRHRAFSGKTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPF
Subjt:  SEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRHRAFSGKTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPF

Query:  GKKPKLPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQALPFAPTGW
        GKKPKLPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQALPFAPTGW
Subjt:  GKKPKLPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQALPFAPTGW
XP_022930523.1 uncharacterized protein LOC111436950 isoform X2 [Cucurbita moschata]7.7e-6064.02Show/hide
Query:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------
        DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKL VPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH                   
Subjt:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------

Query:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
          R   G                    KT+ + + V+P          ++A       CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
Subjt:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE

Query:  TTEKLLMLLYQALP
        TTEKL  L    LP
Subjt:  TTEKLLMLLYQALP
XP_022930524.1 uncharacterized protein LOC111436950 isoform X3 [Cucurbita moschata]7.7e-6064.02Show/hide
Query:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------
        DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKL VPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH                   
Subjt:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------

Query:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
          R   G                    KT+ + + V+P          ++A       CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
Subjt:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE

Query:  TTEKLLMLLYQALP
        TTEKL  L    LP
Subjt:  TTEKLLMLLYQALP
XP_023515189.1 uncharacterized protein LOC111779299 [Cucurbita pepo subsp. pepo]1.2e-6064.49Show/hide
Query:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------
        DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH                   
Subjt:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------

Query:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
          R   G                    KT+ + + V+P          ++A       CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
Subjt:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE

Query:  TTEKLLMLLYQALP
        TTEKL  L    LP
Subjt:  TTEKLLMLLYQALP
TrEMBL top hitse value%identityAlignment
A0A6J1ER50 uncharacterized protein LOC111436950 isoform X13.7e-6064.02Show/hide
Query:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------
        DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKL VPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH                   
Subjt:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------

Query:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
          R   G                    KT+ + + V+P          ++A       CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
Subjt:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE

Query:  TTEKLLMLLYQALP
        TTEKL  L    LP
Subjt:  TTEKLLMLLYQALP
A0A6J1ERN6 uncharacterized protein LOC111436950 isoform X33.7e-6064.02Show/hide
Query:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------
        DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKL VPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH                   
Subjt:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------

Query:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
          R   G                    KT+ + + V+P          ++A       CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
Subjt:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE

Query:  TTEKLLMLLYQALP
        TTEKL  L    LP
Subjt:  TTEKLLMLLYQALP
A0A6J1EVG2 uncharacterized protein LOC111436950 isoform X23.7e-6064.02Show/hide
Query:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------
        DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKL VPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH                   
Subjt:  DPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-------------------

Query:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
          R   G                    KT+ + + V+P          ++A       CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE
Subjt:  --RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISEEE

Query:  TTEKLLMLLYQALP
        TTEKL  L    LP
Subjt:  TTEKLLMLLYQALP
A0A6J1KFF6 uncharacterized protein LOC111494554 isoform X27.8e-5862.5Show/hide
Query:  DPQKKKLSCKTTLHKAE--TDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-----------------
        DPQKKKLSCKTTLHKAE  TDTDKGSIKKEKSEIVGKKKLEV QTASRKTAGSVEKGFEFRSKASKIRKDTD+DTPESENRRH                 
Subjt:  DPQKKKLSCKTTLHKAE--TDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-----------------

Query:  ----RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISE
            R   G                    K + + + V+P  + P               CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISE
Subjt:  ----RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISE

Query:  EETTEKLLMLLYQALP
        EETTEKL  L    LP
Subjt:  EETTEKLLMLLYQALP
A0A6J1KHV8 uncharacterized protein LOC111494554 isoform X17.8e-5862.5Show/hide
Query:  DPQKKKLSCKTTLHKAE--TDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-----------------
        DPQKKKLSCKTTLHKAE  TDTDKGSIKKEKSEIVGKKKLEV QTASRKTAGSVEKGFEFRSKASKIRKDTD+DTPESENRRH                 
Subjt:  DPQKKKLSCKTTLHKAE--TDTDKGSIKKEKSEIVGKKKLEVPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRH-----------------

Query:  ----RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISE
            R   G                    K + + + V+P  + P               CDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISE
Subjt:  ----RAFSG--------------------KTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPGMNRCDISE

Query:  EETTEKLLMLLYQALP
        EETTEKL  L    LP
Subjt:  EETTEKLLMLLYQALP
SwissProt top hitse value%identityAlignment
A0A0P0X9Z7 Cysteine-tryptophan domain-containing zinc finger protein 76.0e-1542.86Show/hide
Query:  DADTPESENRRHRAFSGKTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPK-LPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLL
        D  TP  E R H   S        T +   + PA     + ++     CD CQKWRLLP+   P  LP+KW CSML WLPGMNRC++SE+ETT  L  L 
Subjt:  DADTPESENRRHRAFSGKTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPK-LPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLL

Query:  YQALP
            P
Subjt:  YQALP
Q0DIQ5 Cysteine-tryptophan domain-containing zinc finger protein 54.8e-1252.63Show/hide
Query:  CDSCQKWRLLPFG-KKPKLPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQALP
        CD C+ WRLLP+G     LP+KW CSM +WLPGMN C +SE ETT  +  L    +P
Subjt:  CDSCQKWRLLPFG-KKPKLPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQALP
Q0DRX6 Cysteine-tryptophan domain-containing zinc finger protein 39.3e-1661.02Show/hide
Query:  CDSCQKWRLLPFGKKPK-LPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQALPFA
        CD C KWRLLP+G     LP+KW+CSML+WLPGMN+CDISE+ETT  L  L    +P A
Subjt:  CDSCQKWRLLPFGKKPK-LPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQALPFA
Arabidopsis top hitse value%identityAlignment
AT3G62900.1 CW-type Zinc Finger5.2e-1430.41Show/hide
Query:  RRKEAEVLNLADPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTA-------GSVEKGFEFRSKASKIRKDTDADTPESENRRHR
        R+++ + +    P   K   + T    ET   K + + EK E+V  K    PQ+ S+K         G +    E   +  K  + ++   P  E+   +
Subjt:  RRKEAEVLNLADPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLEVPQTASRKTA-------GSVEKGFEFRSKASKIRKDTDADTPESENRRHR

Query:  AFSGKTTWTEITVDPQWLKPAGGQGL-----IAVDGTGYGCDSCQKWRLLPFGKKPK-LPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQ
        +         +  +P   K      L     + +      CD C KWRLLPFG  P+ LPEKW+C+MLNWLPG+N C++ E+ETT K L  +YQ
Subjt:  AFSGKTTWTEITVDPQWLKPAGGQGL-----IAVDGTGYGCDSCQKWRLLPFGKKPK-LPEKWLCSMLNWLPGMNRCDISEEETTEKLLMLLYQ
AT4G15730.1 CW-type Zinc Finger1.1e-1464.58Show/hide
Query:  CDSCQKWRLLPFG-KKPKLPEKWLCSMLNWLPGMNRCDISEEETTEKL
        C+SC+KWRLLP+     KLP+KWLCSM  WLPGMN C +SEEETT  +
Subjt:  CDSCQKWRLLPFG-KKPKLPEKWLCSMLNWLPGMNRCDISEEETTEKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCCATCTGACTATCACCTCTTCACGAGAGCCTACTTGGGTTGTCAAGAAAAGAAAAACCGCTTCAAGAAACCAAATACGTGCTTTTTCCCGAAAGAATAAAAA
GAATGGTGGGCGAAGCATAGCCACGAATAGAGACGCGACAGTAACATCTTGGTATTGTATTGAGGGAGAGAGGAGAAAAGAGGCAGAAGTGCTTAACTTGGCGGACCCAC
AAAAGAAGAAGCTTTCTTGTAAAACTACACTGCACAAAGCAGAAACAGACACAGACAAAGGATCAATTAAGAAAGAAAAGTCTGAAATTGTTGGCAAGAAGAAATTAGAA
GTGCCACAGACTGCTAGTAGGAAAACAGCTGGTTCAGTCGAGAAAGGCTTTGAGTTTAGGAGTAAAGCATCAAAAATTAGAAAGGACACTGATGCTGACACTCCTGAATC
AGAAAATAGAAGGCACAGGGCTTTTTCTGGTAAAACAACGTGGACGGAGATCACAGTTGATCCGCAGTGGTTGAAACCAGCAGGTGGTCAGGGCCTCATCGCTGTCGATG
GAACTGGGTATGGCTGTGACAGTTGCCAAAAGTGGCGCCTTTTGCCCTTTGGGAAAAAACCCAAACTTCCTGAAAAATGGTTGTGCAGCATGCTTAATTGGCTCCCTGGG
ATGAACCGATGTGACATTAGCGAGGAGGAGACAACGGAGAAGCTTCTAATGCTTTTGTACCAAGCGCTACCATTTGCCCCCACGGGGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCCATCTGACTATCACCTCTTCACGAGAGCCTACTTGGGTTGTCAAGAAAAGAAAAACCGCTTCAAGAAACCAAATACGTGCTTTTTCCCGAAAGAATAAAAA
GAATGGTGGGCGAAGCATAGCCACGAATAGAGACGCGACAGTAACATCTTGGTATTGTATTGAGGGAGAGAGGAGAAAAGAGGCAGAAGTGCTTAACTTGGCGGACCCAC
AAAAGAAGAAGCTTTCTTGTAAAACTACACTGCACAAAGCAGAAACAGACACAGACAAAGGATCAATTAAGAAAGAAAAGTCTGAAATTGTTGGCAAGAAGAAATTAGAA
GTGCCACAGACTGCTAGTAGGAAAACAGCTGGTTCAGTCGAGAAAGGCTTTGAGTTTAGGAGTAAAGCATCAAAAATTAGAAAGGACACTGATGCTGACACTCCTGAATC
AGAAAATAGAAGGCACAGGGCTTTTTCTGGTAAAACAACGTGGACGGAGATCACAGTTGATCCGCAGTGGTTGAAACCAGCAGGTGGTCAGGGCCTCATCGCTGTCGATG
GAACTGGGTATGGCTGTGACAGTTGCCAAAAGTGGCGCCTTTTGCCCTTTGGGAAAAAACCCAAACTTCCTGAAAAATGGTTGTGCAGCATGCTTAATTGGCTCCCTGGG
ATGAACCGATGTGACATTAGCGAGGAGGAGACAACGGAGAAGCTTCTAATGCTTTTGTACCAAGCGCTACCATTTGCCCCCACGGGGTGGTAG
Protein sequenceShow/hide protein sequence
MGGHLTITSSREPTWVVKKRKTASRNQIRAFSRKNKKNGGRSIATNRDATVTSWYCIEGERRKEAEVLNLADPQKKKLSCKTTLHKAETDTDKGSIKKEKSEIVGKKKLE
VPQTASRKTAGSVEKGFEFRSKASKIRKDTDADTPESENRRHRAFSGKTTWTEITVDPQWLKPAGGQGLIAVDGTGYGCDSCQKWRLLPFGKKPKLPEKWLCSMLNWLPG
MNRCDISEEETTEKLLMLLYQALPFAPTGW