; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg15983 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg15983
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPolyadenylate-binding protein 2-like
Genome locationCarg_Chr07:2444296..2448104
RNA-Seq ExpressionCarg15983
SyntenyCarg15983
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]4.8e-11199.53Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        MDEEEHEVYGGEIPVEEGDVDM AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
        QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR

Query:  YRRPMRYMPYY
        YRRPMRYMPYY
Subjt:  YRRPMRYMPYY

KAG7026854.1 Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]9.6e-112100Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
        QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR

Query:  YRRPMRYMPYY
        YRRPMRYMPYY
Subjt:  YRRPMRYMPYY

XP_022962974.1 polyadenylate-binding protein 3-like [Cucurbita moschata]4.8e-11199.53Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        MDEEEHEVYGGEIPVEEGDVDM AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
        QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR

Query:  YRRPMRYMPYY
        YRRPMRYMPYY
Subjt:  YRRPMRYMPYY

XP_023003098.1 polyadenylate-binding protein 3-like [Cucurbita maxima]9.0e-11098.1Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        MDEEEHEVYGGEIPVEEGDVDM+AADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GA VSQESKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
        QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR

Query:  YRRPMRYMPYY
        YRRPMRYMPYY
Subjt:  YRRPMRYMPYY

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]3.5e-10694.81Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        MDEEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY-GYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRY+PYMGYRSRRPYVPPYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY-GYGKTP

Query:  RYRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RYRRPMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein1.1e-10593.4Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DM+A DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY-GYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY-GYGKTP

Query:  RYRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RYRRPMRYMPYY

A0A5A7T2C2 Polyadenylate-binding protein 2-like2.9e-10694.34Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY-GYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPY-GYGKTP

Query:  RYRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RYRRPMRYMPYY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X12.2e-10694.79Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEE DVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA VSQE+KEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
        QHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGK PR
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR

Query:  YRRPMRYMPYY
        +RR M+YMPYY
Subjt:  YRRPMRYMPYY

A0A6J1HIK8 polyadenylate-binding protein 3-like2.3e-11199.53Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        MDEEEHEVYGGEIPVEEGDVDM AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
        QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR

Query:  YRRPMRYMPYY
        YRRPMRYMPYY
Subjt:  YRRPMRYMPYY

A0A6J1KVH8 polyadenylate-binding protein 3-like4.4e-11098.1Show/hide
Query:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ
        MDEEEHEVYGGEIPVEEGDVDM+AADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GA VSQESKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
        QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR
Subjt:  QHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPR

Query:  YRRPMRYMPYY
        YRRPMRYMPYY
Subjt:  YRRPMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 21.0e-3151.72Show/hide
Query:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-
        +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++          KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF 
Subjt:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-

Query:  GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY
        G PKGFAY+EF E   V  ALLLN S LH R LKV  KRTN+PGM +   +     R     GYR R     PY
Subjt:  GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY

Q28165 Polyadenylate-binding protein 23.9e-3144.89Show/hide
Query:  DEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA---VVSQESKEETDSRSVFVGNVDYACTPEE
        ++EE E  G    + EGD    A +D    EL+ +K R++EMEEEA  L+E+Q +VEK+M     P  A   ++S E K E D+RS++VGNVDY  T EE
Subjt:  DEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA---VVSQESKEETDSRSVFVGNVDYACTPEE

Query:  VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMK---QYFPQ-----RYNPYMGYRSRRPYVPPYF
        ++ HF  CG+VNRVTIL DKF G PKGFAY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+    + FP+     R   Y   RSR       F
Subjt:  VQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMK---QYFPQ-----RYNPYMGYRSRRPYVPPYF

Query:  YSPYGYGKTPR---YRRPMRYMPYY
        YS  G+   PR   YR   R   +Y
Subjt:  YSPYGYGKTPR---YRRPMRYMPYY

Q93VI4 Polyadenylate-binding protein 14.2e-7065.64Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDMN-----------AADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR
        DE+EHEVYGGEIP  EEG++D             AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G V + E KEE DSR
Subjt:  DEEEHEVYGGEIP-VEEGDVDMN-----------AADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTN+PGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRP

Query:  YVPPYFYSPYGYGKTPRYRRPMRYMPY
         VP  FY PY YG+ PR+RRPMRY PY
Subjt:  YVPPYFYSPYGYGKTPRYRRPMRYMPY

Q9FJN9 Polyadenylate-binding protein 21.6e-8877.73Show/hide
Query:  MDEEEHEVYGGEIP----------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNV
        M+EEEHEVYGGEIP              D+DM AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA    +Q  KEE D+RSVFVGNV
Subjt:  MDEEEHEVYGGEIP----------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTN+PG+KQ+  +R+NPYMGYR RRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFY

Query:  SPYGYGKTPRYRRPMRYMPY
        SPYGYGK PR+RRPMRYMPY
Subjt:  SPYGYGKTPRYRRPMRYMPY

Q9LX90 Polyadenylate-binding protein 32.0e-9179.63Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYAC
        M+EEEHEVYGGEIP      V + D+DM+AAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA    +QE KEE D+RSV+VGNVDYAC
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P R+NP MGYR RRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  YGKTPRYRRPMRYMPY
        YGK PR+RRPMRYMPY
Subjt:  YGKTPRYRRPMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-9279.63Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYAC
        M+EEEHEVYGGEIP      V + D+DM+AAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA    +QE KEE D+RSV+VGNVDYAC
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P R+NP MGYR RRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  YGKTPRYRRPMRYMPY
        YGK PR+RRPMRYMPY
Subjt:  YGKTPRYRRPMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-8579.21Show/hide
Query:  MDEEEHEVYGGEIP------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYAC
        M+EEEHEVYGGEIP      V + D+DM+AAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA    +QE KEE D+RSV+VGNVDYAC
Subjt:  MDEEEHEVYGGEIP------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P R+NP MGYR RRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  YG
        YG
Subjt:  YG

AT5G51120.1 polyadenylate-binding protein 13.0e-7165.64Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDMN-----------AADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR
        DE+EHEVYGGEIP  EEG++D             AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G V + E KEE DSR
Subjt:  DEEEHEVYGGEIP-VEEGDVDMN-----------AADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTN+PGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRP

Query:  YVPPYFYSPYGYGKTPRYRRPMRYMPY
         VP  FY PY YG+ PR+RRPMRY PY
Subjt:  YVPPYFYSPYGYGKTPRYRRPMRYMPY

AT5G51120.2 polyadenylate-binding protein 13.6e-6455.3Show/hide
Query:  DEEEHEVYGGEIP-VEEGDVDMN-----------AADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        DE+EHEVYGGEIP  EEG++D             AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  DEEEHEVYGGEIP-VEEGDVDMN-----------AADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESE
                           +   + VS   KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESE
Subjt:  -------------------DPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESE

Query:  LHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY
        LHGRQ+KV  KRTN+PGM+Q F  R  P+   R   P VP  FY PY YG+ PR+RRPMRY PY
Subjt:  LHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-8977.73Show/hide
Query:  MDEEEHEVYGGEIP----------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNV
        M+EEEHEVYGGEIP              D+DM AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA    +Q  KEE D+RSVFVGNV
Subjt:  MDEEEHEVYGGEIP----------VEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTN+PG+KQ+  +R+NPYMGYR RRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFY

Query:  SPYGYGKTPRYRRPMRYMPY
        SPYGYGK PR+RRPMRYMPY
Subjt:  SPYGYGKTPRYRRPMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAGGAGCACGAGGTTTACGGTGGAGAGATCCCGGTCGAAGAGGGTGATGTTGACATGAATGCCGCCGATGACGACGCCATCAAGGAGCTAGACGAGATGAA
GAAGCGACTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAGATGCAGGCCAAGGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCCGGTGCGGTTGTAAGTC
AAGAAAGCAAGGAGGAGACAGATTCGCGATCCGTGTTTGTTGGCAACGTGGATTATGCATGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAAC
AGGGTTACCATTCTTACAGATAAATTTGGTCAACCCAAGGGCTTCGCTTATGTGGAGTTCCTTGAAGCCGAGGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTT
GCATGGAAGACAATTGAAGGTTCAACAAAAGCGGACTAATATTCCTGGGATGAAGCAGTATTTCCCTCAGCGTTACAATCCCTACATGGGTTATCGATCCAGGAGGCCAT
ATGTACCCCCGTATTTCTACTCACCATATGGATATGGGAAGACTCCCCGTTACCGAAGGCCCATGCGATACATGCCATACTACTAG
mRNA sequenceShow/hide mRNA sequence
GAAGGTTGTGATAGGTACACTACACGAGAAAGGACGGAGATGGATGAAGAGGAGCACGAGGTTTACGGTGGAGAGATCCCGGTCGAAGAGGGTGATGTTGACATGAATGC
CGCCGATGACGACGCCATCAAGGAGCTAGACGAGATGAAGAAGCGACTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAGATGCAGGCCAAGGTAGAAAAGGAAA
TGGGCGCTGTTCAAGATCCTGCCGGTGCGGTTGTAAGTCAAGAAAGCAAGGAGGAGACAGATTCGCGATCCGTGTTTGTTGGCAACGTGGATTATGCATGTACACCTGAA
GAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACCATTCTTACAGATAAATTTGGTCAACCCAAGGGCTTCGCTTATGTGGAGTTCCTTGAAGCCGA
GGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGGACTAATATTCCTGGGATGAAGCAGTATTTCCCTCAGC
GTTACAATCCCTACATGGGTTATCGATCCAGGAGGCCATATGTACCCCCGTATTTCTACTCACCATATGGATATGGGAAGACTCCCCGTTACCGAAGGCCCATGCGATAC
ATGCCATACTACTAGGAGGGCTTTGCCCATAACTAGACTGCCATATGAATCTATATTTATGACTTCACTTCGATTTAGAGCCTATAGAACTATGGACTTGATTATCTTTA
GCCATTCGATGTCGAATTATATCAATGATCTAATGTATGATATACGGTAATATCCAAACTTTTTGTATGATGATTTGGCTGTGATATCCAAACTTTTTGTATGATGATTT
GGCTGTGATATCCTAACTTTTTAGCAACTAACTGTTTAGCCTTTCGGAAGAGTAGTTTTTCTGGAATTTCTACTTTTTAGCAACTAAATCTAGTCTAGGTGAGATTATGA
GTATGATCCCTACATTTTAGTTTGGTTGGTATGATTTTAAAATTTTTGACTTAGCTTCC
Protein sequenceShow/hide protein sequence
MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVN
RVTILTDKFGQPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKTPRYRRPMRYMPYY