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Carg16001 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16001
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPLAT domain-containing protein
Genome locationCarg_Chr07:2382051..2382527
RNA-Seq ExpressionCarg16001
SyntenyCarg16001
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001024 - PLAT/LH2 domain
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594872.1 PLAT domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]4.2e-88100Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ
        GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQ

KAG7026837.1 PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-90100Show/hide
Query:  MQDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVT
        MQDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVT
Subjt:  MQDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVT

Query:  TTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
        TTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
Subjt:  TTGVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI

XP_022963310.1 PLAT domain-containing protein 3-like [Cucurbita moschata]3.6e-8798.72Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
        GVHR CDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGP RLKQVI
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI

XP_023002987.1 PLAT domain-containing protein 1-like [Cucurbita maxima]3.3e-8898.72Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILI+DLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
        GVHRPCDQAQFTVEQWLALDTSPYVLTAIR+NCPKESIGSRRDPTRSGPLRLKQVI
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI

XP_023517016.1 PLAT domain-containing protein 3 [Cucurbita pepo subsp. pepo]3.8e-89100Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
        GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI

TrEMBL top hitse value%identityAlignment
A0A0A0KGA0 PLAT domain-containing protein8.1e-6981.13Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        +PDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI I DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY EVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKES-IGSRRDPTRSGP--LRLKQVI
        GVH PCDQ  FTVEQWLALD SPY LT I++NCP  S   S RD  RSG   L+LKQV+
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKES-IGSRRDPTRSGP--LRLKQVI

A0A1S3B1J7 lipoxygenase homology domain-containing protein 11.9e-7082.91Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI I DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY EVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSG--PLRLKQVI
        GVHR CDQ  FTVEQWLALD  PY LTAI++NCP  S  SRRD  RSG   L LKQV+
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSG--PLRLKQVI

A0A5A7SYJ2 Lipoxygenase-like proteiny domain-containing protein 11.9e-7082.91Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVY+RTGSILKAGTDSVI+ATLYTA GDGI I DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY EVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSG--PLRLKQVI
        GVHR CDQ  FTVEQWLALD  PY LTAI++NCP  S  SRRD  RSG   L LKQV+
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSG--PLRLKQVI

A0A6J1HHM4 PLAT domain-containing protein 3-like1.7e-8798.72Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
        GVHR CDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGP RLKQVI
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI

A0A6J1KL50 PLAT domain-containing protein 1-like1.6e-8898.72Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILI+DLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI
        GVHRPCDQAQFTVEQWLALDTSPYVLTAIR+NCPKESIGSRRDPTRSGPLRLKQVI
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI

SwissProt top hitse value%identityAlignment
C8YR32 Lipoxygenase homology domain-containing protein 12.5e-0631.91Show/hide
Query:  YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEV
        YTV V+T  IL AGTD+ +   ++  NGD   + ++    W        N FER N D F+         +C L +  D  G   GW+ +Y +V
Subjt:  YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEV

O65660 PLAT domain-containing protein 12.4e-5771.64Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYT Y+RTGSI KAGTDS+ISA +Y  +GD I I++L+ W GLMGPDYNYFERGNLDIFSGR PCL +P+C+LNLTSDGSG HHGWY NY E+TT 
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP
        GVH  C    F +EQWLA DTSPY LTA+R+NCP
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP

Q2V2V3 PLAT domain-containing protein 31.3e-3464.42Show/hide
Query:  ISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVT-TTGVHRPCDQAQFTVEQWLALDTS
        +S  LY + G   +I DL  WGGLMGP ++YFERGNLDIFSG G CLS PVC++NLTSDGSG HHGWYCNY EVT +    R C Q +F VEQWLA D S
Subjt:  ISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVT-TTGVHRPCDQAQFTVEQWLALDTS

Query:  PYVL
        PY L
Subjt:  PYVL

Q8IVV2 Lipoxygenase homology domain-containing protein 11.9e-0630.56Show/hide
Query:  YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTG--
        YTV V+T  IL AGTD+ +   ++  NGD   + ++    W        N FER N D F+         +C L +  D  G   GW+ +Y +V      
Subjt:  YTVYVRTGSILKAGTDSVISATLYTANGDG--ILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTG--

Query:  --VHRPCD
           H  CD
Subjt:  --VHRPCD

Q9SIE7 PLAT domain-containing protein 21.7e-5569.01Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        + DCVYT ++RTGS  KAGTDS+ISA +Y   GD I IR+LE WGGLMGP YNY+ERGNLDIFSG+ PCL +PVCSLNLTSDGSG HHGWY NY EVTT 
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP---KESIG
        GVH  C    F VEQWLA DTSPY L+A+R+NCP   +ES+G
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP---KESIG

Arabidopsis top hitse value%identityAlignment
AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein1.2e-5669.01Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        + DCVYT ++RTGS  KAGTDS+ISA +Y   GD I IR+LE WGGLMGP YNY+ERGNLDIFSG+ PCL +PVCSLNLTSDGSG HHGWY NY EVTT 
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP---KESIG
        GVH  C    F VEQWLA DTSPY L+A+R+NCP   +ES+G
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP---KESIG

AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein1.7e-5871.64Show/hide
Query:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT
        DPDCVYT Y+RTGSI KAGTDS+ISA +Y  +GD I I++L+ W GLMGPDYNYFERGNLDIFSGR PCL +P+C+LNLTSDGSG HHGWY NY E+TT 
Subjt:  DPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTT

Query:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP
        GVH  C    F +EQWLA DTSPY LTA+R+NCP
Subjt:  GVHRPCDQAQFTVEQWLALDTSPYVLTAIRDNCP

AT5G65158.1 Lipase/lipooxygenase, PLAT/LH2 family protein9.0e-3664.42Show/hide
Query:  ISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVT-TTGVHRPCDQAQFTVEQWLALDTS
        +S  LY + G   +I DL  WGGLMGP ++YFERGNLDIFSG G CLS PVC++NLTSDGSG HHGWYCNY EVT +    R C Q +F VEQWLA D S
Subjt:  ISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVT-TTGVHRPCDQAQFTVEQWLALDTS

Query:  PYVL
        PY L
Subjt:  PYVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGATCCAGATTGCGTCTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGATTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGG
AATCCTCATCAGAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCG
CACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCCGGTCCGCACCATGGCTGGTACTGCAACTACTTCGAGGTCACCACAACGGGTGTCCACAGGCCCTGCGATCAA
GCCCAGTTCACGGTGGAGCAGTGGTTAGCCCTCGATACATCGCCCTATGTGTTGACCGCCATCCGTGATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAAC
CCGATCGGGTCCCCTGAGGTTGAAGCAGGTCATATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGATCCAGATTGCGTCTACACGGTGTATGTCAGGACCGGCTCCATCCTCAAAGCAGGGACGGATTCGGTGATTAGCGCGACGCTCTACACCGCCAATGGCGACGG
AATCCTCATCAGAGATCTGGAGAAATGGGGCGGCTTAATGGGACCTGATTACAACTACTTCGAGAGGGGCAATCTCGACATTTTCAGCGGAAGAGGACCATGCCTGAGCG
CACCCGTGTGTTCCTTGAATCTGACCTCCGACGGATCCGGTCCGCACCATGGCTGGTACTGCAACTACTTCGAGGTCACCACAACGGGTGTCCACAGGCCCTGCGATCAA
GCCCAGTTCACGGTGGAGCAGTGGTTAGCCCTCGATACATCGCCCTATGTGTTGACCGCCATCCGTGATAACTGCCCCAAGGAATCGATTGGAAGCCGCCGTGATCCAAC
CCGATCGGGTCCCCTGAGGTTGAAGCAGGTCATATGA
Protein sequenceShow/hide protein sequence
MQDPDCVYTVYVRTGSILKAGTDSVISATLYTANGDGILIRDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYFEVTTTGVHRPCDQ
AQFTVEQWLALDTSPYVLTAIRDNCPKESIGSRRDPTRSGPLRLKQVI