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Carg16002 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16002
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPLAT domain-containing protein 3-like
Genome locationCarg_Chr07:2379985..2380718
RNA-Seq ExpressionCarg16002
SyntenyCarg16002
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001024 - PLAT/LH2 domain
IPR036392 - PLAT/LH2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594871.1 PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]8.7e-9897.74Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
        MASK ALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIY QTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC

Query:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
        LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAP HPCHKQRFSVNQWL+TDQEPYSLTAVVDYCGARPSPSVYDLVF
Subjt:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF

KAG7026836.1 PLAT domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-100100Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
        MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC

Query:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
        LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
Subjt:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF

XP_022963077.1 PLAT domain-containing protein 3-like [Cucurbita moschata]1.7e-9898.31Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
        MASK ALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIY QTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC

Query:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
        LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWL+TDQEPYSLTAVVDYCGARPSPSVYDLVF
Subjt:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF

XP_023004029.1 PLAT domain-containing protein 3-like [Cucurbita maxima]1.2e-9192.09Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
        MASK ALPFLIL+H   LLLLSTAAVPE +DGGECGYLIY QTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLD FTGRGPC
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC

Query:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
        LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWL+TD EPYSLTAVVDYCG RP PSVYD+VF
Subjt:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF

XP_023518309.1 PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo]3.2e-9293.22Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
        MASK ALPFLILSH   LLLLSTAAVPE +DGGECGYLIY QTGTVKKAGTHSTIGLEVKTASGEGI VPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC

Query:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
        LTSP+CSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWL+TDQEPYSLTAVVDYCGARP+PSVYD+VF
Subjt:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF

TrEMBL top hitse value%identityAlignment
A0A2P5AEB2 PLAT/LH2 domain containing protein9.2e-4556.67Show/hide
Query:  LLLLLLSTAAVPEPLD-GGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLNLTSNG
        LLLL LS  A+ +PLD   +C Y IY +TG++ KAGT S I +    ++G G+ + NLE WGG+MGP YN++E G LD F+GRGPCLT+PIC+LNLTS+G
Subjt:  LLLLLLSTAAVPEPLD-GGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLNLTSNG

Query:  SGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC
        SGP+H WYC+YVEVT +    PC +Q F+V QWL+TD  PY LTA+ +YC
Subjt:  SGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC

A0A2P5C1U6 PLAT/LH2 domain containing protein1.0e-4354.49Show/hide
Query:  LILSHLLLLLLLSTAAVPEPLD-GGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSL
        LILS LLL +     A+ +PLD   +C Y IY +TG++ KAGT S I +    ++G G+ + NLE WGG+MGP YN+FE G LD F+GRGPCLT+PIC+L
Subjt:  LILSHLLLLLLLSTAAVPEPLD-GGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSL

Query:  NLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC
        N+TS+GSGP+H WYC+YVEVT +     C +Q F+V QWL+TD  PY LTA+ +YC
Subjt:  NLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC

A0A6J1BY14 PLAT domain-containing protein 3-like1.4e-6471.59Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPL----------DGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGR
        MASK  LPFLILS +LLL + ST +V   L           GGEC Y+IY QTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGR
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPL----------DGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGR

Query:  LDTFTGRGPCLT--SPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC
        LDTFTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT SAP HPC KQRFSV++WL+ D+EP++LTA+VDYC
Subjt:  LDTFTGRGPCLT--SPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC

A0A6J1HE92 PLAT domain-containing protein 3-like8.4e-9998.31Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
        MASK ALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIY QTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC

Query:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
        LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWL+TDQEPYSLTAVVDYCGARPSPSVYDLVF
Subjt:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF

A0A6J1KV14 PLAT domain-containing protein 3-like5.9e-9292.09Show/hide
Query:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC
        MASK ALPFLIL+H   LLLLSTAAVPE +DGGECGYLIY QTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLD FTGRGPC
Subjt:  MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPC

Query:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF
        LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWL+TD EPYSLTAVVDYCG RP PSVYD+VF
Subjt:  LTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF

SwissProt top hitse value%identityAlignment
O65660 PLAT domain-containing protein 15.0e-4048.47Show/hide
Query:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN
        ++L  LLLL  +S  A  E  D  +C Y  Y +TG++ KAGT S I   +    G+ I + NL+ W G+MGPDYN+FE G LD F+GR PCL SPIC+LN
Subjt:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN

Query:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSV
        LTS+GSG +H WY +YVE+T +     C  Q F + QWL+TD  PY LTAV + C  +   SV
Subjt:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSV

Q2V2V3 PLAT domain-containing protein 34.6e-2546.15Show/hide
Query:  IGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLNLTSNGSGPYHAWYCDYVEVTAS-APGHPCHKQRFSVNQWLSTDQE
        + L +  + G+   + +L  WGG+MGP +++FE G LD F+G G CL+ P+C++NLTS+GSG +H WYC+YVEVT S +    C +++F V QWL+ D  
Subjt:  IGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLNLTSNGSGPYHAWYCDYVEVTAS-APGHPCHKQRFSVNQWLSTDQE

Query:  PYSL
        PY L
Subjt:  PYSL

Q9SIE7 PLAT domain-containing protein 21.8e-3748.39Show/hide
Query:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN
        L LS LL++  +S  A+ +  D  +C Y  + +TG+  KAGT S I   V    G+ I + NLE WGG+MGP YN++E G LD F+G+ PCL SP+CSLN
Subjt:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN

Query:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC
        LTS+GSG +H WY +YVEVT +     C  Q F V QWL++D  PY L+AV + C
Subjt:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC

Arabidopsis top hitse value%identityAlignment
AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein1.3e-3848.39Show/hide
Query:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN
        L LS LL++  +S  A+ +  D  +C Y  + +TG+  KAGT S I   V    G+ I + NLE WGG+MGP YN++E G LD F+G+ PCL SP+CSLN
Subjt:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN

Query:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC
        LTS+GSG +H WY +YVEVT +     C  Q F V QWL++D  PY L+AV + C
Subjt:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYC

AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein3.6e-4148.47Show/hide
Query:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN
        ++L  LLLL  +S  A  E  D  +C Y  Y +TG++ KAGT S I   +    G+ I + NL+ W G+MGPDYN+FE G LD F+GR PCL SPIC+LN
Subjt:  LILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLN

Query:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSV
        LTS+GSG +H WY +YVE+T +     C  Q F + QWL+TD  PY LTAV + C  +   SV
Subjt:  LTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSV

AT5G65158.1 Lipase/lipooxygenase, PLAT/LH2 family protein3.2e-2646.15Show/hide
Query:  IGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLNLTSNGSGPYHAWYCDYVEVTAS-APGHPCHKQRFSVNQWLSTDQE
        + L +  + G+   + +L  WGG+MGP +++FE G LD F+G G CL+ P+C++NLTS+GSG +H WYC+YVEVT S +    C +++F V QWL+ D  
Subjt:  IGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLNLTSNGSGPYHAWYCDYVEVTAS-APGHPCHKQRFSVNQWLSTDQE

Query:  PYSL
        PY L
Subjt:  PYSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAAAATGTGCACTACCGTTTCTTATCCTCTCGCACCTCCTCCTCCTCCTCCTACTCTCCACCGCCGCCGTGCCGGAGCCTCTAGATGGCGGGGAGTGCGGTTA
CTTAATCTATGCCCAAACAGGGACGGTGAAGAAGGCCGGCACTCACTCAACCATCGGCCTGGAGGTGAAGACGGCGTCTGGGGAGGGGATTTGGGTGCCTAATTTGGAGG
AATGGGGTGGAATTATGGGTCCAGACTATAACTTCTTTGAGACCGGGAGATTGGATACCTTCACTGGCAGAGGGCCTTGCCTCACCTCCCCTATTTGCTCTCTCAATTTG
ACCTCCAATGGCTCCGGTCCTTACCACGCTTGGTACTGTGACTACGTCGAGGTCACGGCCTCTGCCCCAGGCCATCCTTGCCACAAGCAGCGCTTCTCAGTCAACCAGTG
GCTTTCCACTGACCAGGAGCCCTACAGCCTCACCGCTGTTGTGGACTATTGTGGGGCTCGGCCATCCCCCAGTGTGTATGACTTGGTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
CAAGGCAGAAAAATGGCGTCAAAATGTGCACTACCGTTTCTTATCCTCTCGCACCTCCTCCTCCTCCTCCTACTCTCCACCGCCGCCGTGCCGGAGCCTCTAGATGGCGG
GGAGTGCGGTTACTTAATCTATGCCCAAACAGGGACGGTGAAGAAGGCCGGCACTCACTCAACCATCGGCCTGGAGGTGAAGACGGCGTCTGGGGAGGGGATTTGGGTGC
CTAATTTGGAGGAATGGGGTGGAATTATGGGTCCAGACTATAACTTCTTTGAGACCGGGAGATTGGATACCTTCACTGGCAGAGGGCCTTGCCTCACCTCCCCTATTTGC
TCTCTCAATTTGACCTCCAATGGCTCCGGTCCTTACCACGCTTGGTACTGTGACTACGTCGAGGTCACGGCCTCTGCCCCAGGCCATCCTTGCCACAAGCAGCGCTTCTC
AGTCAACCAGTGGCTTTCCACTGACCAGGAGCCCTACAGCCTCACCGCTGTTGTGGACTATTGTGGGGCTCGGCCATCCCCCAGTGTGTATGACTTGGTTTTCTAAATCT
CTACTCTTCTCATTGGAGTACACAAATAAATAAATATCGATATTTAAATTTAAATCATCTAAACAATCTAATAAACTATCTTCTTTGTTTTTTACATCAACACA
Protein sequenceShow/hide protein sequence
MASKCALPFLILSHLLLLLLLSTAAVPEPLDGGECGYLIYAQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDTFTGRGPCLTSPICSLNL
TSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLSTDQEPYSLTAVVDYCGARPSPSVYDLVF