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Carg16043 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16043
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:2188420..2190807
RNA-Seq ExpressionCarg16043
SyntenyCarg16043
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594832.1 SCARECROW-LIKE protein 7, partial [Cucurbita argyrosperma subsp. sororia]2.6e-7888.76Show/hide
Query:  DFPGLLQLNCRSKWIINTRTIGKVPYCSRGGETTPIQQFLGLLQPPQYPYTFRLTVSDQSLSSDLCHG-------------SNGETHGELILDRAKRLNA
        DFPGLLQLNCRSKWIIN RTIGKVPYCSRGGETTPIQQFLGLLQPPQYPYTFRLTVSDQSLSSDLCHG             SNGETHGELILDRAKRLNA
Subjt:  DFPGLLQLNCRSKWIINTRTIGKVPYCSRGGETTPIQQFLGLLQPPQYPYTFRLTVSDQSLSSDLCHG-------------SNGETHGELILDRAKRLNA

Query:  DMIFAMLSLSDLVVMLMPEMPKWNSLDCPVRAPFLQYPSTLLLQLSLRDSLGETCSSKVVERSRPIRLV
        DMIFAMLSLSDLVVMLMPEMPKWNSLDCPVRAPFLQYPST LLQL++ DSLGETCSSKVVERSRPIRL+
Subjt:  DMIFAMLSLSDLVVMLMPEMPKWNSLDCPVRAPFLQYPSTLLLQLSLRDSLGETCSSKVVERSRPIRLV
KAG7026795.1 hypothetical protein SDJN02_10802, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-95100Show/hide
Query:  FSQDFPGLLQLNCRSKWIINTRTIGKVPYCSRGGETTPIQQFLGLLQPPQYPYTFRLTVSDQSLSSDLCHGSNGETHGELILDRAKRLNADMIFAMLSLS
        FSQDFPGLLQLNCRSKWIINTRTIGKVPYCSRGGETTPIQQFLGLLQPPQYPYTFRLTVSDQSLSSDLCHGSNGETHGELILDRAKRLNADMIFAMLSLS
Subjt:  FSQDFPGLLQLNCRSKWIINTRTIGKVPYCSRGGETTPIQQFLGLLQPPQYPYTFRLTVSDQSLSSDLCHGSNGETHGELILDRAKRLNADMIFAMLSLS

Query:  DLVVMLMPEMPKWNSLDCPVRAPFLQYPSTLLLQLSLRDSLGETCSSKVVERSRPIRLVFGRLVVRIHPDLND
        DLVVMLMPEMPKWNSLDCPVRAPFLQYPSTLLLQLSLRDSLGETCSSKVVERSRPIRLVFGRLVVRIHPDLND
Subjt:  DLVVMLMPEMPKWNSLDCPVRAPFLQYPSTLLLQLSLRDSLGETCSSKVVERSRPIRLVFGRLVVRIHPDLND
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTCGCAGGATTTTCCGGGTCTTCTGCAATTGAATTGCCGGTCTAAATGGATTATCAATACAAGGACGATTGGAAAGGTTCCATACTGTTCGCGAGGTGGAGAAACGAC
TCCGATTCAACAATTTCTCGGGTTGCTACAACCGCCGCAGTACCCCTATACTTTTAGGTTGACTGTTTCTGATCAATCTTTGTCATCCGACCTTTGCCATGGCAGTAACG
GAGAGACGCATGGAGAACTCATTTTGGATCGGGCCAAGCGTCTCAATGCTGATATGATCTTCGCTATGCTGAGCCTGTCGGATCTGGTGGTTATGTTGATGCCTGAAATG
CCCAAGTGGAACAGTCTCGATTGTCCTGTACGAGCTCCTTTCCTTCAATACCCGTCAACTTTACTCCTGCAACTCAGTCTTAGAGACAGTTTGGGAGAGACCTGTAGCTC
AAAGGTGGTAGAGCGCTCAAGGCCAATAAGGTTGGTTTTTGGGAGGTTGGTGGTTCGAATCCATCCGGATCTGAATGATTAG
mRNA sequenceShow/hide mRNA sequence
TTCTCGCAGGATTTTCCGGGTCTTCTGCAATTGAATTGCCGGTCTAAATGGATTATCAATACAAGGACGATTGGAAAGGTTCCATACTGTTCGCGAGGTGGAGAAACGAC
TCCGATTCAACAATTTCTCGGGTTGCTACAACCGCCGCAGTACCCCTATACTTTTAGGTTGACTGTTTCTGATCAATCTTTGTCATCCGACCTTTGCCATGGCAGTAACG
GAGAGACGCATGGAGAACTCATTTTGGATCGGGCCAAGCGTCTCAATGCTGATATGATCTTCGCTATGCTGAGCCTGTCGGATCTGGTGGTTATGTTGATGCCTGAAATG
CCCAAGTGGAACAGTCTCGATTGTCCTGTACGAGCTCCTTTCCTTCAATACCCGTCAACTTTACTCCTGCAACTCAGTCTTAGAGACAGTTTGGGAGAGACCTGTAGCTC
AAAGGTGGTAGAGCGCTCAAGGCCAATAAGGTTGGTTTTTGGGAGGTTGGTGGTTCGAATCCATCCGGATCTGAATGATTAGGTTTGTGTTTATATGGCTTGGAATGGAT
TGTTAAATAAAAGCATGGGTCAATAATGTTTTAGGCTGATGCTGGTTTAGATATTGAACTTCCATCCACTCGCTGCAGCCACCATTCTCACTTTGCCTTCTGTAAGTAAT
TTCGTTCTTTCCTCTTCCATGAGTGCTTCACAATTATGGGACACGAAGTCATATTATCTAATATCATCTTTAAATATATTAGTTTGAAGATATTGGACCAAGTTTCTTCA
TCATTGTTGGTTTATTTACTACCATTACTATTTTGATTCAGTTTTTTTTAGCAATTTTACGTTAAGGTGATATAGTCCATCGATGGGTTATTATTATTATTATTATTATT
GTTTTATTTTGTTGTATATATGTTAGTCTAGTAAGTTGAGTT
Protein sequenceShow/hide protein sequence
FSQDFPGLLQLNCRSKWIINTRTIGKVPYCSRGGETTPIQQFLGLLQPPQYPYTFRLTVSDQSLSSDLCHGSNGETHGELILDRAKRLNADMIFAMLSLSDLVVMLMPEM
PKWNSLDCPVRAPFLQYPSTLLLQLSLRDSLGETCSSKVVERSRPIRLVFGRLVVRIHPDLND