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Carg16047 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16047
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:2181566..2182712
RNA-Seq ExpressionCarg16047
SyntenyCarg16047
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026791.1 hypothetical protein SDJN02_10798, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-90100Show/hide
Query:  MSLNVTLHLILSSWSPIDIVYMSWLHSKSHDMCGKAQRFQPYTWDDCGGGLGHYTARPEIFQFGIVDQKEDMKHCWPHSWLSTGGPLNNWKKPEPCFAIH
        MSLNVTLHLILSSWSPIDIVYMSWLHSKSHDMCGKAQRFQPYTWDDCGGGLGHYTARPEIFQFGIVDQKEDMKHCWPHSWLSTGGPLNNWKKPEPCFAIH
Subjt:  MSLNVTLHLILSSWSPIDIVYMSWLHSKSHDMCGKAQRFQPYTWDDCGGGLGHYTARPEIFQFGIVDQKEDMKHCWPHSWLSTGGPLNNWKKPEPCFAIH

Query:  SGFVRCATILVKGSARRYSNVHLMVEGSVCLGAGPNSLEIGQERTPIRFPVDR
        SGFVRCATILVKGSARRYSNVHLMVEGSVCLGAGPNSLEIGQERTPIRFPVDR
Subjt:  SGFVRCATILVKGSARRYSNVHLMVEGSVCLGAGPNSLEIGQERTPIRFPVDR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTAATGTAACATTGCATCTCATCTTGTCATCTTGGTCCCCAATCGATATAGTCTATATGTCTTGGCTTCATTCTAAGTCTCATGACATGTGTGGCAAAGCACA
GCGTTTTCAGCCCTACACTTGGGATGACTGCGGTGGAGGCCTAGGCCATTACACCGCCCGTCCCGAGATCTTCCAATTTGGAATAGTTGATCAGAAGGAGGATATGAAGC
ATTGCTGGCCTCACTCGTGGCTCTCCACGGGAGGGCCATTGAACAACTGGAAAAAGCCCGAGCCTTGCTTTGCCATCCACTCTGGTTTCGTCCGTTGCGCGACTATCTTA
GTCAAAGGATCGGCCCGCCGTTATTCAAATGTACATTTGATGGTTGAGGGATCCGTTTGCCTGGGTGCGGGCCCGAATTCTCTGGAAATCGGACAGGAAAGAACACCCAT
ACGATTCCCCGTCGATCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTAATGTAACATTGCATCTCATCTTGTCATCTTGGTCCCCAATCGATATAGTCTATATGTCTTGGCTTCATTCTAAGTCTCATGACATGTGTGGCAAAGCACA
GCGTTTTCAGCCCTACACTTGGGATGACTGCGGTGGAGGCCTAGGCCATTACACCGCCCGTCCCGAGATCTTCCAATTTGGAATAGTTGATCAGAAGGAGGATATGAAGC
ATTGCTGGCCTCACTCGTGGCTCTCCACGGGAGGGCCATTGAACAACTGGAAAAAGCCCGAGCCTTGCTTTGCCATCCACTCTGGTTTCGTCCGTTGCGCGACTATCTTA
GTCAAAGGATCGGCCCGCCGTTATTCAAATGTACATTTGATGGTTGAGGGATCCGTTTGCCTGGGTGCGGGCCCGAATTCTCTGGAAATCGGACAGGAAAGAACACCCAT
ACGATTCCCCGTCGATCGCTAA
Protein sequenceShow/hide protein sequence
MSLNVTLHLILSSWSPIDIVYMSWLHSKSHDMCGKAQRFQPYTWDDCGGGLGHYTARPEIFQFGIVDQKEDMKHCWPHSWLSTGGPLNNWKKPEPCFAIHSGFVRCATIL
VKGSARRYSNVHLMVEGSVCLGAGPNSLEIGQERTPIRFPVDR