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Carg16078 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16078
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:2023449..2024091
RNA-Seq ExpressionCarg16078
SyntenyCarg16078
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7828903.1 putative methyltransferase PMT27 [Senna tora]3.8e-0846.58Show/hide
Query:  SGRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAG-FISDNQFASRPYYSIHLCQDRLQFA
        SG   I +W P AFL  ++  L+FGEG   FP +R QQ+ HF    G FI+DNQF+S  +YSI+ C    +FA
Subjt:  SGRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAG-FISDNQFASRPYYSIHLCQDRLQFA

KAG6594794.1 hypothetical protein SDJN03_11347, partial [Cucurbita argyrosperma subsp. sororia]8.7e-3797.47Show/hide
Query:  GRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAGFISDNQFASRPYYSIHLCQDRLQFAPVQEKKTL
        GRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAGFISDNQFASRPYYSIHLCQDRLQFAPVQEKK +
Subjt:  GRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAGFISDNQFASRPYYSIHLCQDRLQFAPVQEKKTL

KAG7026761.1 hypothetical protein SDJN02_10767, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-72100Show/hide
Query:  MCLCLFTYCILLKMLGGLQIFVLGGNFNFIFIELDACFSTKSGRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAGFISDNQFASRPY
        MCLCLFTYCILLKMLGGLQIFVLGGNFNFIFIELDACFSTKSGRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAGFISDNQFASRPY
Subjt:  MCLCLFTYCILLKMLGGLQIFVLGGNFNFIFIELDACFSTKSGRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAGFISDNQFASRPY

Query:  YSIHLCQDRLQFAPVQEKKTLRSLNAAANLQGRVMHEVS
        YSIHLCQDRLQFAPVQEKKTLRSLNAAANLQGRVMHEVS
Subjt:  YSIHLCQDRLQFAPVQEKKTLRSLNAAANLQGRVMHEVS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCTGTGCCTATTTACCTACTGCATTCTTCTGAAGATGCTAGGTGGTCTACAAATCTTCGTGCTAGGGGGTAATTTTAATTTTATTTTTATTGAATTGGATGCTTG
TTTTTCTACCAAATCAGGAAGACTCTGCATAAGTATCTGGTCTCCAATCGCCTTTCTGAGCACTCAGAAGCCCTTCCTGATTTTTGGAGAAGGTCAAGTGAACTTCCCAA
CGGAGAGACTTCAACAGGTTCTCCACTTCTCCAATCGTGCTGGATTCATCTCGGATAATCAATTTGCCTCCAGGCCTTACTATTCGATCCACCTCTGCCAAGACAGGTTG
CAGTTTGCACCTGTACAAGAGAAAAAGACTTTAAGGTCTCTCAACGCTGCTGCAAACCTGCAAGGACGAGTCATGCATGAGGTATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCTGTGCCTATTTACCTACTGCATTCTTCTGAAGATGCTAGGTGGTCTACAAATCTTCGTGCTAGGGGGTAATTTTAATTTTATTTTTATTGAATTGGATGCTTG
TTTTTCTACCAAATCAGGAAGACTCTGCATAAGTATCTGGTCTCCAATCGCCTTTCTGAGCACTCAGAAGCCCTTCCTGATTTTTGGAGAAGGTCAAGTGAACTTCCCAA
CGGAGAGACTTCAACAGGTTCTCCACTTCTCCAATCGTGCTGGATTCATCTCGGATAATCAATTTGCCTCCAGGCCTTACTATTCGATCCACCTCTGCCAAGACAGGTTG
CAGTTTGCACCTGTACAAGAGAAAAAGACTTTAAGGTCTCTCAACGCTGCTGCAAACCTGCAAGGACGAGTCATGCATGAGGTATCATGA
Protein sequenceShow/hide protein sequence
MCLCLFTYCILLKMLGGLQIFVLGGNFNFIFIELDACFSTKSGRLCISIWSPIAFLSTQKPFLIFGEGQVNFPTERLQQVLHFSNRAGFISDNQFASRPYYSIHLCQDRL
QFAPVQEKKTLRSLNAAANLQGRVMHEVS