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Carg16079 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16079
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglutaredoxin-C3
Genome locationCarg_Chr07:2021204..2022841
RNA-Seq ExpressionCarg16079
SyntenyCarg16079
Gene Ontology termsGO:0034599 - cellular response to oxidative stress (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004362 - glutathione-disulfide reductase activity (molecular function)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011767 - Glutaredoxin active site
IPR011899 - Glutaredoxin, eukaryotic/virial
IPR014025 - Glutaredoxin subgroup
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149976.1 glutaredoxin-C3 [Cucumis sativus]1.4e-5587.22Show/hide
Query:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT
        MMRG  FQLTL L VITL+AL PRD L GA+A+TSTSAFVQNVI+SNRIAMFSKSYCPYC+GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RT
Subjt:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT

Query:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        VPQIFVNGKHIGG+DDLKAAVA+GQLQKLLAS+
Subjt:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

XP_008440783.1 PREDICTED: glutaredoxin-C3 [Cucumis melo]2.1e-5687.97Show/hide
Query:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT
        MMRG  FQLTL + VITL+AL PRDGL GA+A+TSTSAFV NVI+SNRIAMFSKSYCPYC+GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTG+RT
Subjt:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT

Query:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        VPQIFVNGKHIGG+DDLKAAVASGQLQKLLAS+
Subjt:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

XP_022963026.1 glutaredoxin-C3 [Cucurbita moschata]2.7e-64100Show/hide
Query:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
        MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
Subjt:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP

Query:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS
        QIFVNGKHIGGADDLKAAVASGQLQKLLASS
Subjt:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS

XP_023003943.1 glutaredoxin-C3-like [Cucurbita maxima]1.5e-6297.71Show/hide
Query:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
        MMR FQLTLALVVITLSAL PRDGLIGA+ASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
Subjt:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP

Query:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS
        QIFVNGKHIGGADDLKAAVASGQLQKLLASS
Subjt:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS

XP_023518077.1 glutaredoxin-C3 [Cucurbita pepo subsp. pepo]1.0e-6399.24Show/hide
Query:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
        MMRGFQLTLALVVITLSALRPRDGL GADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
Subjt:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP

Query:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS
        QIFVNGKHIGGADDLKAAVASGQLQKLLASS
Subjt:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS

TrEMBL top hitse value%identityAlignment
A0A0A0KKK8 Glutaredoxin domain-containing protein6.5e-5687.22Show/hide
Query:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT
        MMRG  FQLTL L VITL+AL PRD L GA+A+TSTSAFVQNVI+SNRIAMFSKSYCPYC+GAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTG+RT
Subjt:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT

Query:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        VPQIFVNGKHIGG+DDLKAAVA+GQLQKLLAS+
Subjt:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

A0A1S3B2P3 glutaredoxin-C31.0e-5687.97Show/hide
Query:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT
        MMRG  FQLTL + VITL+AL PRDGL GA+A+TSTSAFV NVI+SNRIAMFSKSYCPYC+GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTG+RT
Subjt:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT

Query:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        VPQIFVNGKHIGG+DDLKAAVASGQLQKLLAS+
Subjt:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

A0A5A7SKA5 Glutaredoxin-C31.0e-5687.97Show/hide
Query:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT
        MMRG  FQLTL + VITL+AL PRDGL GA+A+TSTSAFV NVI+SNRIAMFSKSYCPYC+GAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTG+RT
Subjt:  MMRG--FQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRT

Query:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        VPQIFVNGKHIGG+DDLKAAVASGQLQKLLAS+
Subjt:  VPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

A0A6J1HE47 glutaredoxin-C31.3e-64100Show/hide
Query:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
        MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
Subjt:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP

Query:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS
        QIFVNGKHIGGADDLKAAVASGQLQKLLASS
Subjt:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS

A0A6J1KY27 glutaredoxin-C3-like7.2e-6397.71Show/hide
Query:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
        MMR FQLTLALVVITLSAL PRDGLIGA+ASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP
Subjt:  MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVP

Query:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS
        QIFVNGKHIGGADDLKAAVASGQLQKLLASS
Subjt:  QIFVNGKHIGGADDLKAAVASGQLQKLLASS

SwissProt top hitse value%identityAlignment
P55143 Glutaredoxin2.1e-1946.24Show/hide
Query:  QNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        + ++ SN + +FSK+YCPYC   K++  +L  K  VVELD   DG +IQ+ L + TG+RTVP +F+ GKHIGG D   A  + GQL  LL  +
Subjt:  QNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

Q0DAE4 Glutaredoxin-C82.6e-2549.59Show/hide
Query:  ALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELH--EKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGK
        A  +I L+AL        A  + S S+FV++ + ++ + +FSKSYCPYC  AK +F EL   ++P+VVELD R+DG +IQ  L D+ GRRTVPQ+FV+GK
Subjt:  ALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELH--EKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGK

Query:  HIGGADDLKAAVASGQLQKLL
        H+GG+DD   A  SG+L KLL
Subjt:  HIGGADDLKAAVASGQLQKLL

Q6H628 Monothiol glutaredoxin-S61.8e-3467.31Show/hide
Query:  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKL
        A A+ S SAFVQN I+SNRI +FSK+YCPY M AKRIF +L E P++VELDLR+DG +IQSVLLDL GR TVPQ+FVNG+H+GG+DD   A ++GQLQKL
Subjt:  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKL

Query:  LASS
        L +S
Subjt:  LASS

Q8LFQ6 Glutaredoxin-C43.6e-2750.83Show/hide
Query:  VVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGG
        +V+ L AL     ++ + AS+  + FV+  I S++I +FSKSYCPYC  AK +F EL + P+VVELD R+DG  IQ+ L ++ GRRTVPQ+F+NGKH+GG
Subjt:  VVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGG

Query:  ADDLKAAVASGQLQKLLASS
        +DD   A  SG+L KLL  S
Subjt:  ADDLKAAVASGQLQKLLASS

Q9FVX1 Glutaredoxin-C36.6e-3772.12Show/hide
Query:  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKL
        A A+ S SAFVQN I SN+I +FSKSYCPYC+ +KRIFS+L E+PFVVELD R+DG QIQ  LL+  GRRTVPQ+FVNGKHIGG+DDL AA+ SGQLQKL
Subjt:  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKL

Query:  LASS
        LA+S
Subjt:  LASS

Arabidopsis top hitse value%identityAlignment
AT1G77370.1 Glutaredoxin family protein4.7e-3872.12Show/hide
Query:  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKL
        A A+ S SAFVQN I SN+I +FSKSYCPYC+ +KRIFS+L E+PFVVELD R+DG QIQ  LL+  GRRTVPQ+FVNGKHIGG+DDL AA+ SGQLQKL
Subjt:  ADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKL

Query:  LASS
        LA+S
Subjt:  LASS

AT2G20270.1 Thioredoxin superfamily protein8.5e-1635.51Show/hide
Query:  MRGFQLTLALVVITLSALRP-RDGLIGADASTSTSA------FVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELD-LRDDGPQIQSVLLDL
        M  F+  L   VI +++  P R   + A +S+S+S+       V+  +  N + ++SK++C Y    K +F  L  +P VVELD L  +G Q+Q+VL  +
Subjt:  MRGFQLTLALVVITLSALRP-RDGLIGADASTSTSA------FVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELD-LRDDGPQIQSVLLDL

Query:  TGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        TG+ TVP +F+ GKHIGG  D       G+L+ +LA +
Subjt:  TGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS

AT4G28730.1 Glutaredoxin family protein2.0e-1741.82Show/hide
Query:  ASTSTSAF-------VQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELD-LRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVAS
        AS+S+S+F       ++  +  N + ++SK++C YC   K +F  L  +P VVELD L   GPQ+Q VL  LTG+ TVP +FV GKHIGG  D       
Subjt:  ASTSTSAF-------VQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELD-LRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVAS

Query:  GQLQKLLASS
        G L+ +LA +
Subjt:  GQLQKLLASS

AT5G20500.1 Glutaredoxin family protein2.6e-2850.83Show/hide
Query:  VVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGG
        +V+ L AL     ++ + AS+  + FV+  I S++I +FSKSYCPYC  AK +F EL + P+VVELD R+DG  IQ+ L ++ GRRTVPQ+F+NGKH+GG
Subjt:  VVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGG

Query:  ADDLKAAVASGQLQKLLASS
        +DD   A  SG+L KLL  S
Subjt:  ADDLKAAVASGQLQKLLASS

AT5G40370.1 Glutaredoxin family protein2.0e-1743.01Show/hide
Query:  QNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS
        + ++ S  + +FSK+YCPYC+  K +  +L  K   VELD   DG QIQS L + TG+RTVP +F+ G HIGG D        G+L  LL  +
Subjt:  QNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIGGADDLKAAVASGQLQKLLASS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGCGGATTTCAGTTGACTCTGGCTCTGGTGGTGATCACCCTCTCTGCCCTTCGGCCAAGAGATGGCCTTATTGGAGCCGACGCTTCGACTTCCACTTCCGCCTT
CGTTCAGAATGTCATCTTCTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCATATTGCATGGGTGCCAAACGCATCTTCAGTGAACTTCACGAAAAACCTTTTG
TTGTGGAGCTTGATCTTCGAGATGATGGACCTCAAATTCAGAGTGTCCTGCTAGACCTGACAGGCAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGT
GGCGCTGATGATCTTAAAGCCGCTGTTGCTAGTGGTCAGTTGCAGAAACTTCTTGCATCAAGTTGA
mRNA sequenceShow/hide mRNA sequence
TCTTTTTTTTCTCTCTCTCTCTTTTGGCGGGCCGTTTAGGCCCAATAGGTCTGGATATATAAGCTTAGCAGTCGAAGGATTGTGTGTAATTTTGGACGATGATGCGCGGA
TTTCAGTTGACTCTGGCTCTGGTGGTGATCACCCTCTCTGCCCTTCGGCCAAGAGATGGCCTTATTGGAGCCGACGCTTCGACTTCCACTTCCGCCTTCGTTCAGAATGT
CATCTTCTCTAACAGGATTGCCATGTTCTCCAAATCCTACTGCCCATATTGCATGGGTGCCAAACGCATCTTCAGTGAACTTCACGAAAAACCTTTTGTTGTGGAGCTTG
ATCTTCGAGATGATGGACCTCAAATTCAGAGTGTCCTGCTAGACCTGACAGGCAGGCGCACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGCGCTGATGAT
CTTAAAGCCGCTGTTGCTAGTGGTCAGTTGCAGAAACTTCTTGCATCAAGTTGA
Protein sequenceShow/hide protein sequence
MMRGFQLTLALVVITLSALRPRDGLIGADASTSTSAFVQNVIFSNRIAMFSKSYCPYCMGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGRRTVPQIFVNGKHIG
GADDLKAAVASGQLQKLLASS