; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16083 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16083
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear cap-binding protein subunit 2
Genome locationCarg_Chr20:3175498..3180114
RNA-Seq ExpressionCarg16083
SyntenyCarg16083
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]3.2e-8971.76Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED
        HGN   HGR               HE SK                      FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED

KAG7010762.1 Nuclear cap-binding protein subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-129100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGRHEKSKVFRESGDLDEED
        HGNWASHGRHEKSKVFRESGDLDEED
Subjt:  HGNWASHGRHEKSKVFRESGDLDEED

XP_022943536.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita moschata]1.2e-8870.99Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGS+PSV+PQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED
        HGN   HGR               HE SK                      FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED

XP_022943539.1 nuclear cap-binding protein subunit 2-like isoform X2 [Cucurbita moschata]9.4e-8971.26Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGS+PSV+PQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED
        HGN   HGR               HE SK                     FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED

XP_022986368.1 nuclear cap-binding protein subunit 2-like isoform X2 [Cucurbita maxima]1.2e-8871.26Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGSMPSV+PQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED
        HGN   HGR               HE SK                     FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 24.7e-8667.94Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIR DFDWGFQDGRQWGRGRSGGQV            + Y         F    GGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYG   G   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED
        HGN   HGR               HE SK                      FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED

A0A6J1FUM2 Nuclear cap-binding protein subunit 24.5e-8971.26Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGS+PSV+PQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED
        HGN   HGR               HE SK                     FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED

A0A6J1FX36 Nuclear cap-binding protein subunit 25.9e-8970.99Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGS+PSV+PQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED
        HGN   HGR               HE SK                      FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED

A0A6J1J7C7 Nuclear cap-binding protein subunit 27.7e-8970.99Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGSMPSV+PQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED
        HGN   HGR               HE SK                      FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK---------------------VFRESGDLDEED

A0A6J1JFW0 Nuclear cap-binding protein subunit 25.9e-8971.26Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIRADFDWGFQDGRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLGSMPSV+PQYG  HG   
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED
        HGN   HGR               HE SK                     FRESGD DEED
Subjt:  HGNWASHGR---------------HEKSK--------------------VFRESGDLDEED

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 21.9e-4457.59Show/hide
Query:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADF

Query:  DWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQV            + Y         +   RGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKE

Q3ZBJ1 Nuclear cap-binding protein subunit 27.3e-4456.96Show/hide
Query:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADF

Query:  DWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQV            + Y         +   RGGYGKL Q +
Subjt:  DWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKE

Q84L14 Nuclear cap-binding protein subunit 25.7e-7359.38Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS YRDRRF GTQ+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVKYISGT+L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK
        DDRPIR DFDWGF++GRQWGRGRSGGQV            + Y         +   RGGYGK+VQKELEAQR+LVDYG       P+  PQY    G  K
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWK

Query:  HGNWASHGR------------------------------HEKSKVFRESGDLDEED
         G   S+                                 EK+  FRE GD DEED
Subjt:  HGNWASHGR------------------------------HEKSKVFRESGDLDEED

Q9CQ49 Nuclear cap-binding protein subunit 21.9e-4457.59Show/hide
Query:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADF

Query:  DWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQV            + Y         +   RGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 21.9e-7668.37Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVP-QYGLTHGFW
        DDRPIR DFDWGFQ+GRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG  +G  
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVP-QYGLTHGFW

Query:  KHGNWASHGRHEKSK
          GN+   G++   +
Subjt:  KHGNWASHGRHEKSK

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRAD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++ +
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRAD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRAD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++ +
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRAD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-0834.62Show/hide
Query:  LALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I
Subjt:  LALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPI

AT5G44200.1 CAP-binding protein 201.4e-7768.37Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVP-QYGLTHGFW
        DDRPIR DFDWGFQ+GRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG  +G  
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVP-QYGLTHGFW

Query:  KHGNWASHGRHEKSK
          GN+   G++   +
Subjt:  KHGNWASHGRHEKSK

AT5G44200.2 CAP-binding protein 201.4e-7768.37Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVP-QYGLTHGFW
        DDRPIR DFDWGFQ+GRQWGRGRSGGQV            + Y         +   RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG  +G  
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVP-QYGLTHGFW

Query:  KHGNWASHGRHEKSK
          GN+   G++   +
Subjt:  KHGNWASHGRHEKSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGTTCAAGGACCCATCAAAGCTATCTGTATACCGGGATAGAAGATTTCAGGGAACCCAAGATGAATTTGAACTGGCTCTTCAGACTTCAACCACCGTTTA
CGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTTTATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACAC
CTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGGCCCATCCGTGCGGATTTTGAT
TGGGGATTTCAGGATGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGACAGGTAGTGTTTCTGATCTATGTCAAATTAATTCATGACTTGGAGTCCTACAATCACTTCCT
GTTTATTTCATTTTGCTTTGTTGTTCACAGAGGTGGCTATGGAAAGTTAGTTCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTACGGTACTGGTTCACTAGGCT
CTATGCCGTCAGTCGTACCCCAGTACGGTTTAACACATGGATTTTGGAAGCACGGAAATTGGGCCTCTCATGGAAGACACGAAAAATCCAAGGTTTTCCGGGAGAGTGGC
GATCTTGATGAAGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
TAAATATTGGGCAAGTTTATTGTGCATAACGCAGCGTGGGGGAAGAATTGCACGAGCAGAATCGGGCTACTGAGCTCACCCAACGAGTTCTCCAGTTCTTAAGCTAATTC
CAACCCGAAATTTACCTGCTAATTTGATTTGAAGCGGCTCTAATCTGTGCTTTACTTCTTCCTTTTCCACTTCTGTTTCTCGCATTGGCTGATTATATTATCGCCCAAAT
TCCCGACACCTGATATAGACGATTGCATTTTGAACCTTTGATTCGTTGAGTGTCTGCTAGCTACTTCAGCTAGAGTGGTTTTTCGAGTTTTGTTGCAGATTTTGTTCTTC
TTGGGTTCATGGCTTCGTTGTTCAAGGACCCATCAAAGCTATCTGTATACCGGGATAGAAGATTTCAGGGAACCCAAGATGAATTTGAACTGGCTCTTCAGACTTCAACC
ACCGTTTACGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTTTATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTC
AAAAACACCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGGCCCATCCGTGCGG
ATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGACAGGTAGTGTTTCTGATCTATGTCAAATTAATTCATGACTTGGAGTCCTACAAT
CACTTCCTGTTTATTTCATTTTGCTTTGTTGTTCACAGAGGTGGCTATGGAAAGTTAGTTCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTACGGTACTGGTTC
ACTAGGCTCTATGCCGTCAGTCGTACCCCAGTACGGTTTAACACATGGATTTTGGAAGCACGGAAATTGGGCCTCTCATGGAAGACACGAAAAATCCAAGGTTTTCCGGG
AGAGTGGCGATCTTGATGAAGAGGATTGA
Protein sequenceShow/hide protein sequence
MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADFD
WGFQDGRQWGRGRSGGQVVFLIYVKLIHDLESYNHFLFISFCFVVHRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGLTHGFWKHGNWASHGRHEKSKVFRESG
DLDEED