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Carg16084 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16084
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCarg_Chr20:3180631..3181168
RNA-Seq ExpressionCarg16084
SyntenyCarg16084
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010763.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-38100Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
XP_022943541.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]1.5e-3798.9Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
XP_022943543.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita moschata]1.2e-3797.83Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
XP_022986409.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita maxima]1.5e-3797.83Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
XP_023512422.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Cucurbita pepo subsp. pepo]1.2e-3797.83Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHR FRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
TrEMBL top hitse value%identityAlignment
A0A6J1FS03 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X17.4e-3898.9Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
A0A6J1FTB0 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X23.7e-3798.89Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPE
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPE
A0A6J1FX39 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X35.6e-3897.83Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRS CGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
A0A6J1J7G1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X19.6e-3898.9Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
        MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
A0A6J1JFZ5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X37.4e-3897.83Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
        MASIGARSVFRSFSGSARRAAAQIGSQAK SSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG+
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA
SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.0e-0744.32Show/hide
Query:  GARSVFRSFSGSARRAAAQIGSQAKSSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPE
        GARS+ R  + S+R AAA  G  A  + S P  FR    +       R   E+SFC+ES++P+HSA++SALMTS LS+S  + GWL +
Subjt:  GARSVFRSFSGSARRAAAQIGSQAKSSSSTP--FRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPE
Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein2.0e-1147.19Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
AT1G28395.2 unknown protein2.0e-1147.19Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
AT1G28395.3 unknown protein2.0e-1147.19Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+ +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
AT1G28395.4 unknown protein9.9e-1147.67Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWL
        ARSVFRS +  A   A +  +  K   SS+ T FRM    PL++R FR   E+S C+E+M+P+H+A++SAL+ SMLSVSR   GW+
Subjt:  ARSVFRSFSGSARRAAAQIGSQAK---SSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWL
AT2G33847.2 unknown protein7.6e-1147.67Show/hide
Query:  ARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG
        ARSVFRS  G A  AA +      SS+ + F++    PLSHR FR   E+S C+E+M+P+H+A++SAL+ SMLSVS  S  W  +G
Subjt:  ARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTCGTCATCAAGTACTCCTTTTCG
CATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCTTCAGCTTTGA
TGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATTGGTGCTAGATCTGTTTTCCGGTCATTTTCAGGCTCGGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCAAGTCGTCATCAAGTACTCCTTTTCG
CATGGCAACTACGAAGCCTCTCTCCCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATGATGCCATTTCACTCTGCGTCGTCTTCAGCTTTGA
TGACCTCAATGCTCTCTGTCTCGCGCAGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTAA
Protein sequenceShow/hide protein sequence
MASIGARSVFRSFSGSARRAAAQIGSQAKSSSSTPFRMATTKPLSHRTFRCAAEMSFCLESMMPFHSASSSALMTSMLSVSRSSCGWLPEGA