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Carg16090 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16090
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:3210730..3210990
RNA-Seq ExpressionCarg16090
SyntenyCarg16090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010769.1 hypothetical protein SDJN02_27565, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-41100Show/hide
Query:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
Subjt:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

XP_011656875.1 uncharacterized protein LOC105435779 [Cucumis sativus]1.4e-2169.32Show/hide
Query:  MFTTT-EFPIYAVANHHHHRRPAAHRTI-AAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFT+T +FPIYA AN+         RT  +++F+IIRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Subjt:  MFTTT-EFPIYAVANHHHHRRPAAHRTI-AAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

XP_022944204.1 uncharacterized protein LOC111448722 [Cucurbita moschata]2.6e-3997.67Show/hide
Query:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTTEFPIYAVANHHH RRPAAHRTIAAVFSIIRAPFSILSCFAPP VHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
Subjt:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

XP_022985817.1 uncharacterized protein LOC111483748 [Cucurbita maxima]2.0e-3996.51Show/hide
Query:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTTEFPIYAVANHHHHRRPAAHRT +AVFSIIRAPFSILSCFAPP VHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
Subjt:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

XP_023513038.1 uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo]4.9e-3895.4Show/hide
Query:  MFTTTEFPIYAVANHHHH-RRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTTEFPIYAVANHHHH RRPAAHRT +AVFSIIRAPFSILSCFAPP VHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
Subjt:  MFTTTEFPIYAVANHHHH-RRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

TrEMBL top hitse value%identityAlignment
A0A0A0KFS1 Uncharacterized protein6.9e-2269.32Show/hide
Query:  MFTTT-EFPIYAVANHHHHRRPAAHRTI-AAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFT+T +FPIYA AN+         RT  +++F+IIRAPFSILSCFAPP VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Subjt:  MFTTT-EFPIYAVANHHHHRRPAAHRTI-AAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

A0A5A7UIL8 Uncharacterized protein2.0e-2169.32Show/hide
Query:  MFTTT-EFPIYAVANHHHHRRPAAHRTIA-AVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTT +FP YA A ++        RT + A+F+IIRAPFSILSCFAPP+VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Subjt:  MFTTT-EFPIYAVANHHHHRRPAAHRTIA-AVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

A0A5D3CJA9 Uncharacterized protein2.0e-2169.32Show/hide
Query:  MFTTT-EFPIYAVANHHHHRRPAAHRTIA-AVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTT +FP YA A ++        RT + A+F+IIRAPFSILSCFAPP+VH S D FWLS DHYFASTISE NHLMVSDGMRYA+LM
Subjt:  MFTTT-EFPIYAVANHHHHRRPAAHRTIA-AVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

A0A6J1FWB0 uncharacterized protein LOC1114487221.3e-3997.67Show/hide
Query:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTTEFPIYAVANHHH RRPAAHRTIAAVFSIIRAPFSILSCFAPP VHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
Subjt:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

A0A6J1J5Y3 uncharacterized protein LOC1114837489.6e-4096.51Show/hide
Query:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        MFTTTEFPIYAVANHHHHRRPAAHRT +AVFSIIRAPFSILSCFAPP VHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
Subjt:  MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein4.3e-0855.56Show/hide
Query:  IIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        I++ P SI+SCF+ P V S AD  W+S D+     +SE NHLMV DGMRYA+LM
Subjt:  IIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM

AT5G35732.1 unknown protein2.3e-0961.11Show/hide
Query:  IIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM
        I+R PFSI+SCFA P V S  D  W+S D+    +ISE NHLMVSD MRYA+LM
Subjt:  IIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCACTACAACTGAATTCCCCATCTACGCCGTCGCCAATCACCACCACCATCGCCGCCCTGCTGCTCACCGCACCATCGCCGCCGTCTTCAGCATCATTCGTGCCCC
TTTCTCTATTCTCTCTTGCTTCGCTCCACCAACCGTTCACTCCTCCGCCGACACCTTCTGGCTCTCCACCGATCACTATTTTGCCTCCACCATTTCCGAGACCAACCACC
TTATGGTAAGCGACGGCATGCGTTACGCCATGTTGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCACTACAACTGAATTCCCCATCTACGCCGTCGCCAATCACCACCACCATCGCCGCCCTGCTGCTCACCGCACCATCGCCGCCGTCTTCAGCATCATTCGTGCCCC
TTTCTCTATTCTCTCTTGCTTCGCTCCACCAACCGTTCACTCCTCCGCCGACACCTTCTGGCTCTCCACCGATCACTATTTTGCCTCCACCATTTCCGAGACCAACCACC
TTATGGTAAGCGACGGCATGCGTTACGCCATGTTGATGTAG
Protein sequenceShow/hide protein sequence
MFTTTEFPIYAVANHHHHRRPAAHRTIAAVFSIIRAPFSILSCFAPPTVHSSADTFWLSTDHYFASTISETNHLMVSDGMRYAMLM