; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16139 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16139
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsorcin-like
Genome locationCarg_Chr20:3466574..3470292
RNA-Seq ExpressionCarg16139
SyntenyCarg16139
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010818.1 hypothetical protein SDJN02_27614 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-108100Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQ
        MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQ
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQ

Query:  LQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
        LQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  LQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
XP_004139969.1 sorcin isoform X2 [Cucumis sativus]2.1e-7677Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGSI APQL                               QNALAVGNLNFP SIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRGYLVP+DVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA N+FNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
XP_022140739.1 sorcin-like isoform X2 [Momordica charantia]1.4e-7576Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGS+ APQL                               Q ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRG+LVP DVYEALVKIG+TLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA NLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
XP_022943751.1 sorcin-like [Cucurbita moschata]3.4e-7979.5Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGSIIAPQL                               QNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
XP_023511846.1 sorcin-like [Cucurbita pepo subsp. pepo]2.9e-7879Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGSIIA QL                               QNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
TrEMBL top hitse value%identityAlignment
A0A0A0KAX1 Uncharacterized protein1.0e-7677Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGSI APQL                               QNALAVGNLNFP SIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRGYLVP+DVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA N+FNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
A0A1S4DX56 sorcin-like2.5e-7576Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDS  SGSI APQL                               QNALAVGNLNFP SIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRGYLVP+DVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA NLFNSFDTAKQG+VTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
A0A6J1CGJ0 sorcin-like isoform X26.6e-7676Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGS+ APQL                               Q ALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRG+LVP DVYEALVKIG+TLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSA NLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
A0A6J1FSK3 sorcin-like1.7e-7979.5Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGSIIAPQL                               QNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
A0A6J1JFX0 sorcin-like1.7e-7979.5Show/hide
Query:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-
        MENTGILKEWFDRVDSEKSGSIIAPQL                               QNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFE  V  ++ 
Subjt:  MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQ-

Query:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
          +LQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
Subjt:  --QLQQAFSDLERGRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI
SwissProt top hitse value%identityAlignment
Q94743 Sorcin3.5e-1027.98Show/hide
Query:  NTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSI--VQQMIRMYDFDRNGTMSFE---GKVCS
        +T  L+  F RVD++KSGSI A +LQ  L                                   L  PL+I  VQ M+ M+D D NGT++F    G    
Subjt:  NTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSI--VQQMIRMYDFDRNGTMSFE---GKVCS

Query:  SQQLQQAFSDLER-GRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFV
         Q  Q  F   +R   G +   +   AL+  G+ L SP F  +      +  G    DDFI  C+ +Q+    F+ +D    G       QF+
Subjt:  SQQLQQAFSDLER-GRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFV
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATACGGGAATTCTGAAGGAGTGGTTCGATCGAGTTGATTCGGAGAAGTCTGGAAGCATCATAGCTCCTCAGCTTCAGGTTGATCTTCTTGTTTTTCTTATTCA
AAGATTTTATCCTCTTCGTCTCAAAGTCCCGATCGTTGACAAAATTTCTGGATTCCTCCATGATCAGAATGCTCTGGCGGTTGGAAACCTCAACTTTCCTCTCTCAATTG
TGCAGCAAATGATCAGGATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGGCAAAGTTTGTAGCTCTCAACAACTTCAGCAAGCCTTCTCTGACTTGGAAAGA
GGTCGTGGTTATCTAGTCCCAGAGGATGTATACGAGGCATTGGTTAAGATTGGCTTCACGCTGGACTCTCCGGCGTTTTATACTGTCTGCGAGAGCTTTGATCAGAAGAA
AAATGGGAGATTTCGGCTTGATGACTTCATATCTCTCTGTATATTTGTTCAATCAGCTAGGAATTTGTTTAATTCCTTTGATACAGCAAAACAAGGCAGGGTGACTCTAG
ATCTCAACCAATTTGTCTATTGCACTGCTAATTGCAGAATATGA
mRNA sequenceShow/hide mRNA sequence
AAATATAAATGACGTTCCCATCCGCATAACCTTTTTCGGGGGTAAAAATTCGATCCCCTCCGTGAAGAACAATATCCCCTCAGGGCTGCAAATGATAATCAAATAGTTTT
ACTGTAAATGGAGAATACGGGAATTCTGAAGGAGTGGTTCGATCGAGTTGATTCGGAGAAGTCTGGAAGCATCATAGCTCCTCAGCTTCAGGTTGATCTTCTTGTTTTTC
TTATTCAAAGATTTTATCCTCTTCGTCTCAAAGTCCCGATCGTTGACAAAATTTCTGGATTCCTCCATGATCAGAATGCTCTGGCGGTTGGAAACCTCAACTTTCCTCTC
TCAATTGTGCAGCAAATGATCAGGATGTATGATTTTGATAGAAATGGAACTATGAGCTTCGAAGGCAAAGTTTGTAGCTCTCAACAACTTCAGCAAGCCTTCTCTGACTT
GGAAAGAGGTCGTGGTTATCTAGTCCCAGAGGATGTATACGAGGCATTGGTTAAGATTGGCTTCACGCTGGACTCTCCGGCGTTTTATACTGTCTGCGAGAGCTTTGATC
AGAAGAAAAATGGGAGATTTCGGCTTGATGACTTCATATCTCTCTGTATATTTGTTCAATCAGCTAGGAATTTGTTTAATTCCTTTGATACAGCAAAACAAGGCAGGGTG
ACTCTAGATCTCAACCAATTTGTCTATTGCACTGCTAATTGCAGAATATGAAAGTGTAAATATTTTCAACGAAGAGGTGACAGCATAGCATACTGCAGAAACTGTTGGTG
CAACCTGTGGATTTAAAATGGTAGGATATGAACTGTAAACTTACTTTTCTGTAGCATAATCTATCTTGCTTGTTTATCTTTTGGTTTGGATCCTTGTCTTCGATGCTGGA
AAAGGCTTTATATGATTGGAAAACTAGTAATTGAGTTCTATTCATCTACCATATAGCCCGTACGTATATTTTCTTGTAGCCATTCAGTTATATGATTAGTCAATATATTG
GTTTATTTTGTTAGTTTCATATTATTATTCGTAAATACCGTTATGTAGAAATGAACTCCTGTACACTTGATTACCAATATTATCATTTTCATTTTGTACTATTTCTAAAA
TGAACTCCTCTACACTTATTACCAATATTACCAATGAAACATGCAGTTATTATAACATATCTTAGAAATATATGATTAGTGGTTATCAGACCTCATGGCTAAATTTC
Protein sequenceShow/hide protein sequence
MENTGILKEWFDRVDSEKSGSIIAPQLQVDLLVFLIQRFYPLRLKVPIVDKISGFLHDQNALAVGNLNFPLSIVQQMIRMYDFDRNGTMSFEGKVCSSQQLQQAFSDLER
GRGYLVPEDVYEALVKIGFTLDSPAFYTVCESFDQKKNGRFRLDDFISLCIFVQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI