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Carg16143 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16143
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:3484728..3487468
RNA-Seq ExpressionCarg16143
SyntenyCarg16143
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570984.1 Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.9e-0793.75Show/hide
Query:  MVMTERGCLESPAHNLSAILKRLQLKCGNKVK
        MVMTERGCLESPAHNLSAI KRLQLKCGNKV+
Subjt:  MVMTERGCLESPAHNLSAILKRLQLKCGNKVK
KAG7010822.1 hypothetical protein SDJN02_27618, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-40100Show/hide
Query:  MVMTERGCLESPAHNLSAILKRLQLKCGNKVKLLFLKSMPWQIAKIDPSVRFGSLARWPPISEPSTLNLDELAHSVLPSIIIILLQA
        MVMTERGCLESPAHNLSAILKRLQLKCGNKVKLLFLKSMPWQIAKIDPSVRFGSLARWPPISEPSTLNLDELAHSVLPSIIIILLQA
Subjt:  MVMTERGCLESPAHNLSAILKRLQLKCGNKVKLLFLKSMPWQIAKIDPSVRFGSLARWPPISEPSTLNLDELAHSVLPSIIIILLQA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGACAGAAAGAGGTTGCCTGGAATCTCCTGCACACAACTTGTCAGCAATACTAAAGAGGCTGCAACTTAAATGCGGCAATAAAGTGAAGCTTCTTTTCCTGAA
ATCTATGCCTTGGCAAATAGCAAAAATCGACCCATCAGTCAGATTTGGAAGTCTAGCTCGATGGCCACCCATTTCTGAACCCTCAACCCTAAACCTTGATGAACTCGCCC
ATAGTGTCCTTCCTAGCATTATCATTATCCTTCTCCAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGATGACAGAAAGAGGTTGCCTGGAATCTCCTGCACACAACTTGTCAGCAATACTAAAGAGGCTGCAACTTAAATGCGGCAATAAAGTGAAGCTTCTTTTCCTGAA
ATCTATGCCTTGGCAAATAGCAAAAATCGACCCATCAGTCAGATTTGGAAGTCTAGCTCGATGGCCACCCATTTCTGAACCCTCAACCCTAAACCTTGATGAACTCGCCC
ATAGTGTCCTTCCTAGCATTATCATTATCCTTCTCCAGGCTTGA
Protein sequenceShow/hide protein sequence
MVMTERGCLESPAHNLSAILKRLQLKCGNKVKLLFLKSMPWQIAKIDPSVRFGSLARWPPISEPSTLNLDELAHSVLPSIIIILLQA