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Carg16182 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16182
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRhodanese domain-containing protein
Genome locationCarg_Chr20:3732399..3733898
RNA-Seq ExpressionCarg16182
SyntenyCarg16182
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR001763 - Rhodanese-like domain
IPR036873 - Rhodanese-like domain superfamily
IPR044684 - Rhodanese-like domain-containing protein STR17/STR18/HARC1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571026.1 Protein HIGH ARSENIC CONTENT 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4882.93Show/hide
Query:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSA
        PEDVVTVDV+VAKDLLQKGQLYLDV                    RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSA
Subjt:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSA

Query:  WVDSGFAGDKPAEELKIACKFRG
        WVDSGFAGDKPAEELKIACKFRG
Subjt:  WVDSGFAGDKPAEELKIACKFRG

KAG7010859.1 Protein HIGH ARSENIC CONTENT 1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-52100Show/hide
Query:  PEDVVTVDVEVAKDLLQKGQLYLDVRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACK
        PEDVVTVDVEVAKDLLQKGQLYLDVRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACK
Subjt:  PEDVVTVDVEVAKDLLQKGQLYLDVRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACK

Query:  FRG
        FRG
Subjt:  FRG

XP_022943998.1 protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita moschata]6.2e-4879.84Show/hide
Query:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
        PEDVVTVDVEVAKDLLQKGQLYLDV                          RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
Subjt:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM

Query:  AGGYSAWVDSGFAGDKPAEELKIACKFRG
        AGGYSAWVDSGFAGDKPAEELKIACKFRG
Subjt:  AGGYSAWVDSGFAGDKPAEELKIACKFRG

XP_022985695.1 protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita maxima]4.0e-4778.29Show/hide
Query:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
        PEDVVTVDV+VAKDLLQKGQLYLDV                          RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
Subjt:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM

Query:  AGGYSAWVDSGFAGDKPAEELKIACKFRG
         GGYSAWVDSGFAGDKPAEELKIACKFRG
Subjt:  AGGYSAWVDSGFAGDKPAEELKIACKFRG

XP_023512925.1 protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucurbita pepo subsp. pepo]3.8e-4576.74Show/hide
Query:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
        PEDVVTVDVEVAKDLLQKGQLYLDV                          RVKNPDFLAQV SILKKEDHVVVACNSGGRG RAC+DL NAGYEHVKNM
Subjt:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM

Query:  AGGYSAWVDSGFAGDKPAEELKIACKFRG
        AGGYSAWVDSGFAGDKPAEELKIACKFRG
Subjt:  AGGYSAWVDSGFAGDKPAEELKIACKFRG

TrEMBL top hitse value%identityAlignment
A0A1S3C5M3 rhodanese-like domain-containing protein 19, mitochondrial isoform X22.6e-3969.35Show/hide
Query:  TVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS
        TVDV+VAKDLL+KG LYLDV                          RVKNPDFLAQVTSILKKEDH+VVACNSGGRG RAC+DL NAG+EHV NM GGYS
Subjt:  TVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS

Query:  AWVDSGFAGDKPAEELKIACKFRG
        AWVDSGFAG+KP EELKIACKFRG
Subjt:  AWVDSGFAGDKPAEELKIACKFRG

A0A5A7TUB4 Rhodanese-like domain-containing protein 193.3e-3968.8Show/hide
Query:  TVDVEVAKDLLQKGQLYLDV---------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGY
        TVDV+VAKDLL+KG LYLDV                           RVKNPDFLAQVTSILKKEDH+VVACNSGGRG RAC+DL NAG+EHV NM GGY
Subjt:  TVDVEVAKDLLQKGQLYLDV---------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGY

Query:  SAWVDSGFAGDKPAEELKIACKFRG
        SAWVDSGFAG+KP EELKIACKFRG
Subjt:  SAWVDSGFAGDKPAEELKIACKFRG

A0A5D3BKL1 Rhodanese-like domain-containing protein 192.6e-3969.35Show/hide
Query:  TVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS
        TVDV+VAKDLL+KG LYLDV                          RVKNPDFLAQVTSILKKEDH+VVACNSGGRG RAC+DL NAG+EHV NM GGYS
Subjt:  TVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS

Query:  AWVDSGFAGDKPAEELKIACKFRG
        AWVDSGFAG+KP EELKIACKFRG
Subjt:  AWVDSGFAGDKPAEELKIACKFRG

A0A6J1FXK5 protein HIGH ARSENIC CONTENT 1, mitochondrial3.0e-4879.84Show/hide
Query:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
        PEDVVTVDVEVAKDLLQKGQLYLDV                          RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
Subjt:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM

Query:  AGGYSAWVDSGFAGDKPAEELKIACKFRG
        AGGYSAWVDSGFAGDKPAEELKIACKFRG
Subjt:  AGGYSAWVDSGFAGDKPAEELKIACKFRG

A0A6J1JC15 protein HIGH ARSENIC CONTENT 1, mitochondrial2.0e-4778.29Show/hide
Query:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
        PEDVVTVDV+VAKDLLQKGQLYLDV                          RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM
Subjt:  PEDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNM

Query:  AGGYSAWVDSGFAGDKPAEELKIACKFRG
         GGYSAWVDSGFAGDKPAEELKIACKFRG
Subjt:  AGGYSAWVDSGFAGDKPAEELKIACKFRG

SwissProt top hitse value%identityAlignment
F4IPI4 Rhodanese-like domain-containing protein 171.4e-1033.06Show/hide
Query:  VVTVDVEVAKDLLQKGQLYLDVRVK----------------------------NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMA
        V+T+DV  A+ LL  G  +LDVR                              NP+FL  V+S+  + DH+++ C SG R   A   L ++G++ V+NM 
Subjt:  VVTVDVEVAKDLLQKGQLYLDVRVK----------------------------NPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMA

Query:  GGYSAWVDSGFAGDKPAEELK
        GGY AWV+  F      +ELK
Subjt:  GGYSAWVDSGFAGDKPAEELK

Q38853 Rhodanese-like domain-containing protein 15, chloroplastic3.7e-1134.78Show/hide
Query:  TVDVEVAKDLLQKGQLYLDVR--------------------------VKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS
        +V V VA++L Q G  YLDVR                          VKNP FL QV+S  +K D +++ C SG     A  DL  AG+  + ++AGGY 
Subjt:  TVDVEVAKDLLQKGQLYLDVR--------------------------VKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS

Query:  AWVDSGFAGDKPAEE
        AW ++    + P EE
Subjt:  AWVDSGFAGDKPAEE

Q39129 Thiosulfate sulfurtransferase 16, chloroplastic1.8e-1340.57Show/hide
Query:  TVDVEVAKDLLQKGQLYLDVRV--------------------------KNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS
        +V V VA DLL  G  YLDVR                           KNPDFL QV+S   + D+++V C SGGR  +A  DL +AG+  VK++ GGYS
Subjt:  TVDVEVAKDLLQKGQLYLDVRV--------------------------KNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS

Query:  AWVDSG
        AW  +G
Subjt:  AWVDSG

Q8RUD6 Protein HIGH ARSENIC CONTENT 1, mitochondrial4.1e-3456.69Show/hide
Query:  EDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMA
        EDV TVDV  AK  L  G  YLDV                          RV NPDFL+QV S+ KK++H++VACN+GGRG RAC+DL N GY+HV NM 
Subjt:  EDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMA

Query:  GGYSAWVDSGFAGDKPAEELKIACKFR
        GGYSAWVD+GFAGDKP E+LKIACKFR
Subjt:  GGYSAWVDSGFAGDKPAEELKIACKFR

Q9FKW8 Thiosulfate sulfurtransferase 181.9e-1540.5Show/hide
Query:  EDVVTVDVEVAKDLLQKGQLYLDV----------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKN
        E+VV+VDV  AK LLQ G  YLDV                            RVKN +FL QV+S+L   D ++V C SG R  +A  +L  AGY+ V+N
Subjt:  EDVVTVDVEVAKDLLQKGQLYLDV----------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKN

Query:  MAGGYSAWVDSGFAGDKPAEE
        + GGY AWVD  F  +   EE
Subjt:  MAGGYSAWVDSGFAGDKPAEE

Arabidopsis top hitse value%identityAlignment
AT2G21045.1 Rhodanese/Cell cycle control phosphatase superfamily protein2.9e-3556.69Show/hide
Query:  EDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMA
        EDV TVDV  AK  L  G  YLDV                          RV NPDFL+QV S+ KK++H++VACN+GGRG RAC+DL N GY+HV NM 
Subjt:  EDVVTVDVEVAKDLLQKGQLYLDV--------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMA

Query:  GGYSAWVDSGFAGDKPAEELKIACKFR
        GGYSAWVD+GFAGDKP E+LKIACKFR
Subjt:  GGYSAWVDSGFAGDKPAEELKIACKFR

AT5G66040.1 sulfurtransferase protein 161.3e-1440.57Show/hide
Query:  TVDVEVAKDLLQKGQLYLDVRV--------------------------KNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS
        +V V VA DLL  G  YLDVR                           KNPDFL QV+S   + D+++V C SGGR  +A  DL +AG+  VK++ GGYS
Subjt:  TVDVEVAKDLLQKGQLYLDVRV--------------------------KNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYS

Query:  AWVDSG
        AW  +G
Subjt:  AWVDSG

AT5G66040.2 sulfurtransferase protein 161.5e-1251.72Show/hide
Query:  KNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSG
        KNPDFL QV+S   + D+++V C SGGR  +A  DL +AG+  VK++ GGYSAW  +G
Subjt:  KNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSG

AT5G66170.2 sulfurtransferase 184.4e-1539.84Show/hide
Query:  EDVVTVDVEVAKDLLQKGQLYLDV----------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNA--GYEHV
        E+VV+VDV  AK LLQ G  YLDV                            RVKN +FL QV+S+L   D ++V C SG R  +A  +L  A  GY+ V
Subjt:  EDVVTVDVEVAKDLLQKGQLYLDV----------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNA--GYEHV

Query:  KNMAGGYSAWVDSGFAGDKPAEE
        +N+ GGY AWVD  F  +   EE
Subjt:  KNMAGGYSAWVDSGFAGDKPAEE

AT5G66170.3 sulfurtransferase 181.4e-1640.5Show/hide
Query:  EDVVTVDVEVAKDLLQKGQLYLDV----------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKN
        E+VV+VDV  AK LLQ G  YLDV                            RVKN +FL QV+S+L   D ++V C SG R  +A  +L  AGY+ V+N
Subjt:  EDVVTVDVEVAKDLLQKGQLYLDV----------------------------RVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKN

Query:  MAGGYSAWVDSGFAGDKPAEE
        + GGY AWVD  F  +   EE
Subjt:  MAGGYSAWVDSGFAGDKPAEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGAGGATGTTGTGACTGTTGATGTTGAAGTTGCCAAAGATCTGTTGCAGAAGGGGCAGCTTTATTTGGATGTCAGAGTAAAGAATCCTGACTTTCTAGCACAAGTTAC
ATCTATATTGAAGAAGGAAGATCATGTAGTAGTGGCTTGCAACAGTGGTGGTAGAGGACATCGCGCTTGCATCGATCTTCGTAACGCGGGGTATGAGCATGTGAAGAACA
TGGCAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGGGACAAACCAGCTGAAGAGCTCAAAATAGCTTGTAAGTTCCGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
CCAGAGGATGTTGTGACTGTTGATGTTGAAGTTGCCAAAGATCTGTTGCAGAAGGGGCAGCTTTATTTGGATGTCAGAGTAAAGAATCCTGACTTTCTAGCACAAGTTAC
ATCTATATTGAAGAAGGAAGATCATGTAGTAGTGGCTTGCAACAGTGGTGGTAGAGGACATCGCGCTTGCATCGATCTTCGTAACGCGGGGTATGAGCATGTGAAGAACA
TGGCAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGGGACAAACCAGCTGAAGAGCTCAAAATAGCTTGTAAGTTCCGAGGTTGA
Protein sequenceShow/hide protein sequence
PEDVVTVDVEVAKDLLQKGQLYLDVRVKNPDFLAQVTSILKKEDHVVVACNSGGRGHRACIDLRNAGYEHVKNMAGGYSAWVDSGFAGDKPAEELKIACKFRG