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Carg16195 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16195
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr20:3796207..3796590
RNA-Seq ExpressionCarg16195
SyntenyCarg16195
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV91497.1 hypothetical protein CFOL_v3_34892 [Cephalotus follicularis]5.7e-2756.25Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
        MEW   KRRGPEWKQ WTGQT+  S+S+PP  LLT+FGIVIVLL  SQ T  Y++Q+H +A+NF+L +FLLPIL+IFFM+++S  G  N +  R   G+ 
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP

Query:  RR-GASPLTITILVSLILVLLYFRPSFH
        +R G SP  + ILV L+LVLL ++ SFH
Subjt:  RR-GASPLTITILVSLILVLLYFRPSFH

KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]3.4e-2758.27Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
        MEW  PKRRGPEWKQ WTGQTL  S+S+PP  LLTIFGIVIVLLWFSQ  TGY  Q+ ++  NFQL L +LPIL+IFFM+ YS  G       R      
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP

Query:  RRGASPLTITILVSLILVLLYFRPSFH
        R G SP  + IL+ L+LVLL ++ SFH
Subjt:  RRGASPLTITILVSLILVLLYFRPSFH

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-65100Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
        MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP

Query:  RRGASPLTITILVSLILVLLYFRPSFH
        RRGASPLTITILVSLILVLLYFRPSFH
Subjt:  RRGASPLTITILVSLILVLLYFRPSFH

KGN61894.1 hypothetical protein Csa_005908 [Cucumis sativus]7.2e-3065.12Show/hide
Query:  MEWLEPKRRGPEWKQ--EWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATG
        M+   PKRRGPEWK+    TGQTL  SVS PP QLL IFGIVIVLLWFSQ   G++ Q++RS   FQL LFLLPI VIFFM SYS   LIN    RS TG
Subjt:  MEWLEPKRRGPEWKQ--EWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATG

Query:  SPRRGASPLTITILVSLILVLLYFRPSFH
          +RGASP TI ILV LILVLLY++ SFH
Subjt:  SPRRGASPLTITILVSLILVLLYFRPSFH

XP_022763101.1 uncharacterized protein LOC111308773 [Durio zibethinus]4.4e-2756.15Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
        MEW+ P+RRGP+WKQ WTGQTL  SVS+PP  LLTIFGIV+VLLW SQ  TGY  ++H +A NFQL + +LPIL+IFFM S+S  G   L  W+      
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP

Query:  ---RRGASPLTITILVSLILVLLYFRPSFH
           R G SP  I ILV ++LVLL ++ SFH
Subjt:  ---RRGASPLTITILVSLILVLLYFRPSFH

TrEMBL top hitse value%identityAlignment
A0A0A0LLH8 Uncharacterized protein3.5e-3065.12Show/hide
Query:  MEWLEPKRRGPEWKQ--EWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATG
        M+   PKRRGPEWK+    TGQTL  SVS PP QLL IFGIVIVLLWFSQ   G++ Q++RS   FQL LFLLPI VIFFM SYS   LIN    RS TG
Subjt:  MEWLEPKRRGPEWKQ--EWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATG

Query:  SPRRGASPLTITILVSLILVLLYFRPSFH
          +RGASP TI ILV LILVLLY++ SFH
Subjt:  SPRRGASPLTITILVSLILVLLYFRPSFH

A0A1Q3DG80 Uncharacterized protein2.8e-2756.25Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
        MEW   KRRGPEWKQ WTGQT+  S+S+PP  LLT+FGIVIVLL  SQ T  Y++Q+H +A+NF+L +FLLPIL+IFFM+++S  G  N +  R   G+ 
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP

Query:  RR-GASPLTITILVSLILVLLYFRPSFH
        +R G SP  + ILV L+LVLL ++ SFH
Subjt:  RR-GASPLTITILVSLILVLLYFRPSFH

A0A6M2F915 Uncharacterized protein4.7e-2757.36Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLI--NLRSWRSATG
        MEW  PKRRGPEWKQ WTGQT+ GSVSSPP  LL IFGIVI LLW S   TGY  Q+H SA N Q+ L LLPIL+I FM+SYS   L+   LRS +  + 
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLI--NLRSWRSATG

Query:  SPRRGASPLTITILVSLILVLLYFRPSFH
         P  G+ P  I I V ++L+LL +R +FH
Subjt:  SPRRGASPLTITILVSLILVLLYFRPSFH

A0A6P6AE81 uncharacterized protein LOC1113087732.1e-2756.15Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
        MEW+ P+RRGP+WKQ WTGQTL  SVS+PP  LLTIFGIV+VLLW SQ  TGY  ++H +A NFQL + +LPIL+IFFM S+S  G   L  W+      
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP

Query:  ---RRGASPLTITILVSLILVLLYFRPSFH
           R G SP  I ILV ++LVLL ++ SFH
Subjt:  ---RRGASPLTITILVSLILVLLYFRPSFH

A0A7J6EG82 Uncharacterized protein (Fragment)8.1e-2752.63Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSY-SMCGLINLRSWR-----
        M+WL PKRRGP+WKQ WT QT+  S+S+P   L+ IF IV++LLW SQ  TGY  QM ++A NFQL +F+LP L+IFFM+SY S  GL+N + WR     
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSY-SMCGLINLRSWR-----

Query:  SATGSPRRGASPLTITILVSLILVLLYFRPSFH
         A  SP+ G+SP  + I + L+LVLL ++ SFH
Subjt:  SATGSPRRGASPLTITILVSLILVLLYFRPSFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42146.1 unknown protein2.0e-0931.06Show/hide
Query:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP
        M W   +RRG  WK+ W  +TL  S S+PP  LL +  I+ +LL+ S S   Y  ++ ++A+N +L +  LPIL +F + S S    +  +S  S   + 
Subjt:  MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSP

Query:  RR-----GASPLTITILVSLILVLLYFRPSFH
         +     G  P  + +++ L+L+L+  +  FH
Subjt:  RR-----GASPLTITILVSLILVLLYFRPSFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGTTAGAACCAAAGAGAAGGGGTCCAGAGTGGAAACAGGAATGGACAGGCCAAACCCTAGGCGGCTCTGTTTCTTCTCCACCACCTCAATTGCTCACCATTTT
TGGCATTGTCATTGTCTTGCTTTGGTTTTCTCAGTCCACCACAGGCTACGACACTCAAATGCACAGGTCAGCTTCCAATTTCCAGCTGCTTCTTTTCTTGTTGCCCATCT
TGGTGATTTTCTTCATGTCTTCATATTCCATGTGTGGGCTGATCAACCTCCGATCTTGGCGATCGGCAACCGGGTCGCCTCGACGAGGTGCCTCACCATTGACCATTACC
ATTTTAGTTTCTCTCATTCTAGTTTTGCTTTACTTCCGGCCCTCGTTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTGGTTAGAACCAAAGAGAAGGGGTCCAGAGTGGAAACAGGAATGGACAGGCCAAACCCTAGGCGGCTCTGTTTCTTCTCCACCACCTCAATTGCTCACCATTTT
TGGCATTGTCATTGTCTTGCTTTGGTTTTCTCAGTCCACCACAGGCTACGACACTCAAATGCACAGGTCAGCTTCCAATTTCCAGCTGCTTCTTTTCTTGTTGCCCATCT
TGGTGATTTTCTTCATGTCTTCATATTCCATGTGTGGGCTGATCAACCTCCGATCTTGGCGATCGGCAACCGGGTCGCCTCGACGAGGTGCCTCACCATTGACCATTACC
ATTTTAGTTTCTCTCATTCTAGTTTTGCTTTACTTCCGGCCCTCGTTCCATTGA
Protein sequenceShow/hide protein sequence
MEWLEPKRRGPEWKQEWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMHRSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTIT
ILVSLILVLLYFRPSFH