; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16200 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16200
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE2F_CC-MB domain-containing protein
Genome locationCarg_Chr06:2477156..2479600
RNA-Seq ExpressionCarg16200
SyntenyCarg16200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580732.1 hypothetical protein SDJN03_20734, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3577.42Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKS---SSHSLTYTSLRDILPSPTSMSSPTAASAANSGFE
        MD  SA KP+PP PNLRRRNSI VPVVVPSKLNL   AATKSS G A+SP  PLAFEL PIKS   SS SL YTSLRDILPS T++ SPTAASAANSG+E
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKS---SSHSLTYTSLRDILPSPTSMSSPTAASAANSGFE

Query:  ISIRNRLVKQAAWAYLQPMSSLSS
        ISIRNRLVKQAAWAYLQPM+S  S
Subjt:  ISIRNRLVKQAAWAYLQPMSSLSS

KAG7028140.1 hypothetical protein SDJN02_09320, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-178100Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSSLSSLCKTLRGCHTRGEEPLIDTTPSSFSNDLIQIISAVRFAMALYSASVLDLDTVACFLELHEIRFAPRNTAKPLVERRSSGQP
        RLVKQAAWAYLQPMSSLSSLCKTLRGCHTRGEEPLIDTTPSSFSNDLIQIISAVRFAMALYSASVLDLDTVACFLELHEIRFAPRNTAKPLVERRSSGQP
Subjt:  RLVKQAAWAYLQPMSSLSSLCKTLRGCHTRGEEPLIDTTPSSFSNDLIQIISAVRFAMALYSASVLDLDTVACFLELHEIRFAPRNTAKPLVERRSSGQP

Query:  AQSASENPDKHHADKGIPCSLNNFSAEPIGVDIGLGGTRSQVAIPFIALESSHSFSSSPFGMLLHGFLRRFRRSVSHLYYSGVVGVDQTHFMSLVLSIDS
        AQSASENPDKHHADKGIPCSLNNFSAEPIGVDIGLGGTRSQVAIPFIALESSHSFSSSPFGMLLHGFLRRFRRSVSHLYYSGVVGVDQTHFMSLVLSIDS
Subjt:  AQSASENPDKHHADKGIPCSLNNFSAEPIGVDIGLGGTRSQVAIPFIALESSHSFSSSPFGMLLHGFLRRFRRSVSHLYYSGVVGVDQTHFMSLVLSIDS

Query:  NALQLHILQFLSELCVLSAEDKLTPDKVVD
        NALQLHILQFLSELCVLSAEDKLTPDKVVD
Subjt:  NALQLHILQFLSELCVLSAEDKLTPDKVVD

XP_022957964.1 uncharacterized protein LOC111459312 [Cucurbita moschata]1.1e-53100Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSS
        RLVKQAAWAYLQPMSS
Subjt:  RLVKQAAWAYLQPMSS

XP_023005655.1 uncharacterized protein LOC111498593 [Cucurbita maxima]3.2e-5398.28Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAF+ATKSSGGSAASPPLAFELFP+KSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSS
        RLVKQAAWAYLQPMSS
Subjt:  RLVKQAAWAYLQPMSS

XP_023539526.1 uncharacterized protein LOC111800166 [Cucurbita pepo subsp. pepo]2.3e-5197.41Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISA KP+PPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPS TSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSS
        RLVKQAAWAYLQPMSS
Subjt:  RLVKQAAWAYLQPMSS

TrEMBL top hitse value%identityAlignment
A0A0A0LE45 Uncharacterized protein2.7e-3477.05Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF
        MDD SA KP  P  NLRRRNSI VPV VPSKLNL   AATKSS G+ ASP  PLAFEL PIKSSS     SL YTSL+DILPSPT+ SSPTA SAANSG+
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGF

Query:  EISIRNRLVKQAAWAYLQPMSS
        EISIRNRLVKQAAWAYLQPMSS
Subjt:  EISIRNRLVKQAAWAYLQPMSS

A0A6J1F639 uncharacterized protein LOC1114424659.4e-3577.24Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH--SLTYTSLRDILPSPTSMSSPTAASAANSGFEI
        MD  SA KP PP PNLRRRNSI VPVVVPSKL+L   AATKSS G A+SP  PLAFEL PIKSSS   SL YTSLRDILPS T++ SPTAASAANSG+EI
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH--SLTYTSLRDILPSPTSMSSPTAASAANSGFEI

Query:  SIRNRLVKQAAWAYLQPMSSLSS
        SIRNRLVKQAAWAYLQPM+S  S
Subjt:  SIRNRLVKQAAWAYLQPMSSLSS

A0A6J1H3M0 uncharacterized protein LOC1114593125.3e-54100Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSS
        RLVKQAAWAYLQPMSS
Subjt:  RLVKQAAWAYLQPMSS

A0A6J1J4V9 uncharacterized protein LOC1114817682.1e-3477.24Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH--SLTYTSLRDILPSPTSMSSPTAASAANSGFEI
        MD  SA KP PP PNLRRRNSI VPVVV SKLNL   AATKSS G A+SP  PLAFEL PIKSSS   SL YTSLRDILPS T++ SPTAASAANSG+EI
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFPIKSSSH--SLTYTSLRDILPSPTSMSSPTAASAANSGFEI

Query:  SIRNRLVKQAAWAYLQPMSSLSS
        SIRNRLVKQAAWAYLQPM+S  S
Subjt:  SIRNRLVKQAAWAYLQPMSSLSS

A0A6J1KY03 uncharacterized protein LOC1114985931.5e-5398.28Show/hide
Query:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
        MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAF+ATKSSGGSAASPPLAFELFP+KSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN
Subjt:  MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRN

Query:  RLVKQAAWAYLQPMSS
        RLVKQAAWAYLQPMSS
Subjt:  RLVKQAAWAYLQPMSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52520.1 unknown protein2.4e-0649.37Show/hide
Query:  AASPPLAFELFPIKSSSHS--LTYTSLRDILP-SPTSMSSPT---AASAANSGFEISIRNRLVKQAAWAYLQPMSSLSS
        A S  L  EL  +  SS      YTSL+DILP S T++ SP    A ++A SG  I+IRNRLVKQAA +YLQP +   S
Subjt:  AASPPLAFELFPIKSSSHS--LTYTSLRDILP-SPTSMSSPT---AASAANSGFEISIRNRLVKQAAWAYLQPMSSLSS

AT5G06280.1 unknown protein6.3e-0740Show/hide
Query:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR
        P   LRR  SI+         N+      +     A++PP +F  EL  +K SS  + YTSLRDI+ SP + S          SP  ++AA    +ISIR
Subjt:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR

Query:  NRLVKQAAWAYLQPMSSLSS
        NRLVKQAA +YLQP    SS
Subjt:  NRLVKQAAWAYLQPMSSLSS

AT5G06280.3 unknown protein6.3e-0740Show/hide
Query:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR
        P   LRR  SI+         N+      +     A++PP +F  EL  +K SS  + YTSLRDI+ SP + S          SP  ++AA    +ISIR
Subjt:  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYTSLRDILPSPTSMS----------SPTAASAANSGFEISIR

Query:  NRLVKQAAWAYLQPMSSLSS
        NRLVKQAA +YLQP    SS
Subjt:  NRLVKQAAWAYLQPMSSLSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACATCTCCGCTCAAAAACCATACCCACCACCGCCGAATCTTCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTCGTGCCATCAAAACTAAACCTTTTCGCCTT
CGCCGCCACCAAGTCCTCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTTGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACA
TTTTGCCATCTCCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCGGCTTGGGCGTAT
CTTCAACCCATGTCTTCCTTATCAAGTTTATGCAAAACTCTCCGAGGTTGTCACACCAGAGGCGAGGAGCCTTTGATTGATACAACGCCCAGTTCCTTCAGTAATGACTT
GATCCAAATCATTTCTGCAGTAAGATTCGCAATGGCCTTGTATTCTGCTTCGGTGCTTGATCTTGACACTGTAGCCTGTTTTCTGGAACTCCATGAGATTAGATTTGCTC
CAAGAAATACAGCAAAGCCGCTAGTTGAACGTCGATCATCGGGACAACCAGCCCAATCAGCATCAGAAAACCCCGACAAACATCATGCTGATAAGGGTATTCCTTGTTCT
CTGAATAATTTTTCAGCAGAACCCATTGGTGTAGACATAGGTTTGGGTGGAACTAGATCCCAAGTTGCCATTCCGTTTATAGCGCTGGAGAGCTCACATTCATTTAGCTC
CTCTCCATTTGGAATGTTATTGCATGGCTTCCTGCGCAGGTTTCGGAGGTCAGTTAGCCATCTCTATTATTCTGGAGTTGTTGGTGTGGATCAGACACATTTCATGAGTT
TGGTTTTGAGCATTGACTCGAATGCTCTGCAGCTTCATATTCTGCAATTTCTCTCTGAACTCTGTGTATTATCTGCAGAAGATAAGCTGACACCAGACAAAGTTGTCGAC
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGACATCTCCGCTCAAAAACCATACCCACCACCGCCGAATCTTCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTCGTGCCATCAAAACTAAACCTTTTCGCCTT
CGCCGCCACCAAGTCCTCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTTGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACA
TTTTGCCATCTCCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCGGCTTGGGCGTAT
CTTCAACCCATGTCTTCCTTATCAAGTTTATGCAAAACTCTCCGAGGTTGTCACACCAGAGGCGAGGAGCCTTTGATTGATACAACGCCCAGTTCCTTCAGTAATGACTT
GATCCAAATCATTTCTGCAGTAAGATTCGCAATGGCCTTGTATTCTGCTTCGGTGCTTGATCTTGACACTGTAGCCTGTTTTCTGGAACTCCATGAGATTAGATTTGCTC
CAAGAAATACAGCAAAGCCGCTAGTTGAACGTCGATCATCGGGACAACCAGCCCAATCAGCATCAGAAAACCCCGACAAACATCATGCTGATAAGGGTATTCCTTGTTCT
CTGAATAATTTTTCAGCAGAACCCATTGGTGTAGACATAGGTTTGGGTGGAACTAGATCCCAAGTTGCCATTCCGTTTATAGCGCTGGAGAGCTCACATTCATTTAGCTC
CTCTCCATTTGGAATGTTATTGCATGGCTTCCTGCGCAGGTTTCGGAGGTCAGTTAGCCATCTCTATTATTCTGGAGTTGTTGGTGTGGATCAGACACATTTCATGAGTT
TGGTTTTGAGCATTGACTCGAATGCTCTGCAGCTTCATATTCTGCAATTTCTCTCTGAACTCTGTGTATTATCTGCAGAAGATAAGCTGACACCAGACAAAGTTGTCGAC
TAG
Protein sequenceShow/hide protein sequence
MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAY
LQPMSSLSSLCKTLRGCHTRGEEPLIDTTPSSFSNDLIQIISAVRFAMALYSASVLDLDTVACFLELHEIRFAPRNTAKPLVERRSSGQPAQSASENPDKHHADKGIPCS
LNNFSAEPIGVDIGLGGTRSQVAIPFIALESSHSFSSSPFGMLLHGFLRRFRRSVSHLYYSGVVGVDQTHFMSLVLSIDSNALQLHILQFLSELCVLSAEDKLTPDKVVD