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Carg16210 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16210
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein YLS9
Genome locationCarg_Chr06:2526802..2527557
RNA-Seq ExpressionCarg16210
SyntenyCarg16210
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580743.1 hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia]1.3e-9471.94Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAG VSFP+VFHDGE+D  +GSV VSSST+FKNFQS LSKMIGISSHQFTVYLAEYKIS+D + KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALG--GGGVQN
        RERRRK+   NEDEY   SATKT  KTN   KKNP ENVMLL+RN GIEN++L GFISP  +R++Y++R  KLQLE E Y   +G RNL  G  G G  N
Subjt:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALG--GGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDP
        G+ + KT  C DCL+AKETG A GFHCCA+DAVT GFRSHAGPIARP+KES+P
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDP

KAG6596614.1 hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia]2.1e-13798.41Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNGTT
        RERRRKIQGNEDEYD SSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISP TNRFEYDQRFWKLQLEMEKYLI+IGQRNLALGGGGVQNGTT
Subjt:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNGTT

Query:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDPK
        RLKTAVCWDCLNAKETGVAAGFHCCAHDAVT GFRSHAGPIARPVKESDPK
Subjt:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDPK

KAG7017495.1 hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-9571.94Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAG VSFP+VFHDGE+D  +GSV VSSST+FKNFQS LSKMIGISSHQFTVYLAEYKIS+D + KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALG--GGGVQN
        RERRRK+   NEDEY   SATKT  KTN   KKNP ENVMLL+RN GIEN++L GFISP  +R++Y++R  KLQLE E Y   +G RNL  G  G G  N
Subjt:  RERRRKI-QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALG--GGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDP
        G+ + KT  C DCL+AKETG A GFHCCA+DAVT GFRSHAGPIARP+KES+P
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDP

KAG7028150.1 hypothetical protein SDJN02_09330, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-140100Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNGTT
        RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNGTT
Subjt:  RERRRKIQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNGTT

Query:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDPK
        RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDPK
Subjt:  RLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDPK

XP_031739121.1 uncharacterized protein LOC116402855 [Cucumis sativus]6.7e-9675Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL--GGGGVQN
        RERRRK I  NE++Y FSSATKT TKTN  KKKNP ENVMLL+RN GIENELL GFISPV +R+EY+ R  KLQLE EKYL+ I   NL +  GG G +N
Subjt:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL--GGGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESD
         + R +  +C DCL+AKE GVAAGFHCCA+DAVT GFRSHAGPIARPVKES+
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESD

TrEMBL top hitse value%identityAlignment
A0A0A0LER6 Uncharacterized protein3.3e-9675Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL--GGGGVQN
        RERRRK I  NE++Y FSSATKT TKTN  KKKNP ENVMLL+RN GIENELL GFISPV +R+EY+ R  KLQLE EKYL+ I   NL +  GG G +N
Subjt:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL--GGGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESD
         + R +  +C DCL+AKE GVAAGFHCCA+DAVT GFRSHAGPIARPVKES+
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESD

A0A5A7TLT1 Protein YLS96.8e-9473.2Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        M +T   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNFGAI+ EKN FFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL--GGGGVQN
        RERRRK I  NE++Y FSSATKT TKTN  KKKNP ENVMLL+RN GIENELL GF+SPV +R+EY++R  KLQLE EKYLI +   NL +  GG G +N
Subjt:  RERRRK-IQGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL--GGGGVQN

Query:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKE
         + R +T +C DC++AKE GVAAGFHCCA+DAVT GFRS AGPIARPV++
Subjt:  GTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKE

A0A6A1UKZ8 Uncharacterized protein9.3e-5952.34Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVE A  VSFPVVF DGER++++G+V VS S +FK+FQSI+S+ IGIS HQF+VYLA     +   ++  R+IPITGK NFG I  +K+CFFLVVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQ--GNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALG----GGG
        RER+R+ Q    ED+Y ++S+   + + N    K P ENVMLL+RN  I ++  PGF SP+ +R  Y++R  +LQ+E E+YL ++G R L LG    GG 
Subjt:  RERRRKIQ--GNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALG----GGG

Query:  VQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDP
         +N  TR     C +C+ AK  G   GFH C +DAVT GFRS AGPIARPVK S+P
Subjt:  VQNGTTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESDP

A0A6P9E6Z6 uncharacterized protein LOC1183479052.1e-5550.78Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MV  A  VSFPVVF DGER+  +G V V  S  FKNFQSILS+ IGIS HQF+VYLA     +   ++  R+IPITGKVNF AI+ EK+CFFLV+LKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKI--QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL----GGGG
        RER+R+   +  E+EY  SS    M+      KK P+ NVMLL+R+ G E +  PG++SP+ +R  Y++R  +LQ+E E+YLI++G   L+L     GG 
Subjt:  RERRRKI--QGNEDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLAL----GGGG

Query:  VQNGTTR--LKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKES
         + G  R  +    C +C+ AK+ G   GFH C +D VT+GFRS AGPIARPVK S
Subjt:  VQNGTTR--LKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKES

W9S997 Uncharacterized protein1.8e-4949Show/hide
Query:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR
        MVE  G VSFPVVF DGE + ++GSVAV ++ EFK FQ++LS+ IGIS HQF+V+L        S+ + RR+IPITGKVNFGAI  EK CFF+VVLKRSR
Subjt:  MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSR

Query:  RERRRKIQGNEDEYDFSSATKTMTKTNHSK--KKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNG
        R RRRK   +  + D+          +HS    KNP  NVMLL+R+  ++       +S  ++R EY+ R   LQLE E YL+     N+ L G G +  
Subjt:  RERRRKIQGNEDEYDFSSATKTMTKTNHSK--KKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNG

Query:  TTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESD
         T     VC DC+ AKE G  AGFH C +DAVT GFR  AGPIARP +  +
Subjt:  TTRLKTAVCWDCLNAKETGVAAGFHCCAHDAVTMGFRSHAGPIARPVKESD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGACCGCCGGGTGCGTTTCGTTCCCGGTCGTTTTTCATGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGCTGTGTCTTCTTCGACGGAGTTCAAGAATTT
TCAGTCGATTTTGAGTAAGATGATCGGAATCTCTTCGCACCAGTTCACGGTTTACTTAGCGGAGTATAAGATCTCTATGGATTCCACGGCAAAGATTCGGCGGAGAATCC
CTATCACCGGGAAAGTCAACTTCGGCGCAATCGCACACGAGAAGAACTGTTTCTTTCTCGTGGTTCTGAAACGGTCTCGACGCGAGAGAAGGCGAAAGATCCAGGGAAAC
GAAGACGAATACGATTTCTCATCGGCCACAAAGACAATGACGAAGACGAATCATTCAAAGAAGAAAAATCCACTGGAGAATGTGATGCTGTTGAAACGAAACACTGGCAT
CGAAAACGAATTACTCCCCGGCTTCATCTCGCCAGTGACGAACCGATTCGAATACGACCAGCGATTTTGGAAGCTACAATTAGAGATGGAGAAATACTTAATCGACATAG
GGCAACGCAATCTGGCGCTGGGCGGAGGCGGCGTCCAGAACGGCACTACGAGACTGAAAACGGCAGTCTGCTGGGACTGTCTGAATGCCAAAGAAACAGGCGTGGCGGCC
GGATTTCACTGCTGCGCTCACGACGCCGTGACGATGGGATTCCGGTCACACGCCGGTCCAATTGCCCGACCCGTGAAAGAATCCGACCCGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGACCGCCGGGTGCGTTTCGTTCCCGGTCGTTTTTCATGACGGCGAACGAGATGCCGACGTCGGTTCCGTCGCTGTGTCTTCTTCGACGGAGTTCAAGAATTT
TCAGTCGATTTTGAGTAAGATGATCGGAATCTCTTCGCACCAGTTCACGGTTTACTTAGCGGAGTATAAGATCTCTATGGATTCCACGGCAAAGATTCGGCGGAGAATCC
CTATCACCGGGAAAGTCAACTTCGGCGCAATCGCACACGAGAAGAACTGTTTCTTTCTCGTGGTTCTGAAACGGTCTCGACGCGAGAGAAGGCGAAAGATCCAGGGAAAC
GAAGACGAATACGATTTCTCATCGGCCACAAAGACAATGACGAAGACGAATCATTCAAAGAAGAAAAATCCACTGGAGAATGTGATGCTGTTGAAACGAAACACTGGCAT
CGAAAACGAATTACTCCCCGGCTTCATCTCGCCAGTGACGAACCGATTCGAATACGACCAGCGATTTTGGAAGCTACAATTAGAGATGGAGAAATACTTAATCGACATAG
GGCAACGCAATCTGGCGCTGGGCGGAGGCGGCGTCCAGAACGGCACTACGAGACTGAAAACGGCAGTCTGCTGGGACTGTCTGAATGCCAAAGAAACAGGCGTGGCGGCC
GGATTTCACTGCTGCGCTCACGACGCCGTGACGATGGGATTCCGGTCACACGCCGGTCCAATTGCCCGACCCGTGAAAGAATCCGACCCGAAATAG
Protein sequenceShow/hide protein sequence
MVETAGCVSFPVVFHDGERDADVGSVAVSSSTEFKNFQSILSKMIGISSHQFTVYLAEYKISMDSTAKIRRRIPITGKVNFGAIAHEKNCFFLVVLKRSRRERRRKIQGN
EDEYDFSSATKTMTKTNHSKKKNPLENVMLLKRNTGIENELLPGFISPVTNRFEYDQRFWKLQLEMEKYLIDIGQRNLALGGGGVQNGTTRLKTAVCWDCLNAKETGVAA
GFHCCAHDAVTMGFRSHAGPIARPVKESDPK