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Carg16221 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16221
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTatD related DNase
Genome locationCarg_Chr06:2594918..2596848
RNA-Seq ExpressionCarg16221
SyntenyCarg16221
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596624.1 hypothetical protein SDJN03_09804, partial [Cucurbita argyrosperma subsp. sororia]1.4e-31100Show/hide
Query:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIV
        MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIV
Subjt:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIV

KAG7028161.1 hypothetical protein SDJN02_09341 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-100100Show/hide
Query:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAIVKDYPPFPEQRDKNHHIELMIRAK
        MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAIVKDYPPFPEQRDKNHHIELMIRAK
Subjt:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAIVKDYPPFPEQRDKNHHIELMIRAK

Query:  NDLPLQPNAGTILFAKPETIAINDDIEASWIWSQQRQGLGAVTCTKNPLPYRSKTKVTAVISCCNPFGENHAMPSSINDLCQ
        NDLPLQPNAGTILFAKPETIAINDDIEASWIWSQQRQGLGAVTCTKNPLPYRSKTKVTAVISCCNPFGENHAMPSSINDLCQ
Subjt:  NDLPLQPNAGTILFAKPETIAINDDIEASWIWSQQRQGLGAVTCTKNPLPYRSKTKVTAVISCCNPFGENHAMPSSINDLCQ

ONM27784.1 TatD related DNase [Zea mays]5.2e-0544.62Show/hide
Query:  LQLTPSDLSINPLSHISRSILQMVC-------LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL
        L L P  LS++P S ++ + ++ VC       + KGI+HGK  HAA I A+L+RAW+AGV+RI++
Subjt:  LQLTPSDLSINPLSHISRSILQMVC-------LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL

XP_022936731.1 uncharacterized protein LOC111443234 isoform X1 [Cucurbita moschata]1.0e-2993.33Show/hide
Query:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLA
        MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHI RSILQMVCLIKGI HGKHYHAAHIAA+LSRAW AGVERIV+A
Subjt:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLA

XP_022936739.1 uncharacterized protein LOC111443234 isoform X2 [Cucurbita moschata]1.4e-2990.79Show/hide
Query:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAI
        MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHI RSILQMVCLIKGI HGKHYHAAHIAA+LSRAW AGVERIV+++
Subjt:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAI

TrEMBL top hitse value%identityAlignment
A0A1D6F9F5 TatD related DNase2.5e-0544.62Show/hide
Query:  LQLTPSDLSINPLSHISRSILQMVC-------LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL
        L L P  LS++P S ++ + ++ VC       + KGI+HGK  HAA I A+L+RAW+AGV+RI++
Subjt:  LQLTPSDLSINPLSHISRSILQMVC-------LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL

A0A1D6F9F8 TatD related DNase2.5e-0544.62Show/hide
Query:  LQLTPSDLSINPLSHISRSILQMVC-------LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL
        L L P  LS++P S ++ + ++ VC       + KGI+HGK  HAA I A+L+RAW+AGV+RI++
Subjt:  LQLTPSDLSINPLSHISRSILQMVC-------LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL

A0A6J1DC11 putative deoxyribonuclease TATDN14.3e-0575.76Show/hide
Query:  LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL
        + KGI+HGK YHAA IAA+LSRAWSAGVERI++
Subjt:  LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL

A0A6J1F8B1 uncharacterized protein LOC111443234 isoform X15.0e-3093.33Show/hide
Query:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLA
        MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHI RSILQMVCLIKGI HGKHYHAAHIAA+LSRAW AGVERIV+A
Subjt:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLA

A0A6J1F950 uncharacterized protein LOC111443234 isoform X26.6e-3090.79Show/hide
Query:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAI
        MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHI RSILQMVCLIKGI HGKHYHAAHIAA+LSRAW AGVERIV+++
Subjt:  MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52390.1 TatD related DNase1.9e-0554.55Show/hide
Query:  LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL
        + KG++HGK+ H   IA +L+RAWSAGV+RI++
Subjt:  LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL

AT3G52390.2 TatD related DNase1.9e-0554.55Show/hide
Query:  LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL
        + KG++HGK+ H   IA +L+RAWSAGV+RI++
Subjt:  LIKGIFHGKHYHAAHIAAILSRAWSAGVERIVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACACTGCGAATCATACCTAACCCACTTTCTTACTCAATCCACCTGCAATTAACTCCTTCCGACCTTTCTATCAATCCCTTATCGCACATATCGCGCTCAATTTT
ACAGATGGTATGTTTAATTAAAGGAATCTTCCATGGGAAGCATTACCACGCAGCTCACATAGCCGCTATATTAAGCAGGGCTTGGAGTGCTGGGGTTGAGCGAATCGTTC
TTGCGATTGTGAAGGATTATCCCCCATTTCCGGAACAGAGAGATAAGAATCATCATATAGAGCTAATGATTAGAGCCAAAAATGACTTGCCATTGCAACCAAACGCGGGG
ACTATCCTCTTCGCGAAGCCTGAAACAATTGCCATCAACGACGACATTGAAGCAAGCTGGATTTGGTCGCAACAAAGACAGGGTCTTGGTGCAGTGACTTGCACCAAGAA
CCCATTGCCTTACCGGTCAAAAACAAAGGTCACAGCAGTTATCAGCTGCTGCAACCCATTTGGGGAGAACCATGCCATGCCCTCCTCCATCAATGATCTCTGCCAGTGA
mRNA sequenceShow/hide mRNA sequence
TTTAGGGTATAAATAATCAACAAATGTCATATTTATTGGGTTGGAGGTCATCTCCATCTCTCCTTATCAATTCGAACAAATCTGAAACAACTTCAATGAAAGCGCGTCTT
TCTAGTTCTTCCCTCGCTTTCCTCCGCCATGGGAACACTGCGAATCATACCTAACCCACTTTCTTACTCAATCCACCTGCAATTAACTCCTTCCGACCTTTCTATCAATC
CCTTATCGCACATATCGCGCTCAATTTTACAGATGGTATGTTTAATTAAAGGAATCTTCCATGGGAAGCATTACCACGCAGCTCACATAGCCGCTATATTAAGCAGGGCT
TGGAGTGCTGGGGTTGAGCGAATCGTTCTTGCGATTGTGAAGGATTATCCCCCATTTCCGGAACAGAGAGATAAGAATCATCATATAGAGCTAATGATTAGAGCCAAAAA
TGACTTGCCATTGCAACCAAACGCGGGGACTATCCTCTTCGCGAAGCCTGAAACAATTGCCATCAACGACGACATTGAAGCAAGCTGGATTTGGTCGCAACAAAGACAGG
GTCTTGGTGCAGTGACTTGCACCAAGAACCCATTGCCTTACCGGTCAAAAACAAAGGTCACAGCAGTTATCAGCTGCTGCAACCCATTTGGGGAGAACCATGCCATGCCC
TCCTCCATCAATGATCTCTGCCAGTGA
Protein sequenceShow/hide protein sequence
MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVLAIVKDYPPFPEQRDKNHHIELMIRAKNDLPLQPNAG
TILFAKPETIAINDDIEASWIWSQQRQGLGAVTCTKNPLPYRSKTKVTAVISCCNPFGENHAMPSSINDLCQ