; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16222 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16222
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transcription factor Y subunit
Genome locationCarg_Chr06:2596756..2599585
RNA-Seq ExpressionCarg16222
SyntenyCarg16222
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596625.1 Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma subsp. sororia]4.2e-17596.89Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ

Query:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHNRFELGFGQPL          HYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCCDLCF
        GGHGMVLPKWVAAADNCCDLCF
Subjt:  GGHGMVLPKWVAAADNCCDLCF

KAG7028162.1 Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-184100Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ

Query:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCCDLCF
        GGHGMVLPKWVAAADNCCDLCF
Subjt:  GGHGMVLPKWVAAADNCCDLCF

XP_022956068.1 nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]8.7e-18198.14Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ

Query:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHN FELGF QPLTCENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCCDLCF
        GGHGMVLPKWVAAADNCCDLCF
Subjt:  GGHGMVLPKWVAAADNCCDLCF

XP_023005692.1 nuclear transcription factor Y subunit A-10-like [Cucurbita maxima]1.2e-17496.27Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQ  HGLEKLNTAPFSIYPGDTKNSV AQK SPVFS  
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ

Query:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
          LSEYHN FELGFGQPL CENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCCDLCF
        GGHGMVLPKWVAAA+NCCDLCF
Subjt:  GGHGMVLPKWVAAADNCCDLCF

XP_023539687.1 nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo]3.5e-18299.07Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ

Query:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHNRFELGFGQPL CENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCCDLCF
        GGHGMVLPKWVAAADNCCDLCF
Subjt:  GGHGMVLPKWVAAADNCCDLCF

TrEMBL top hitse value%identityAlignment
A0A0A0LE75 Nuclear transcription factor Y subunit8.0e-14883.38Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKE---QLDSNGKEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPV
        MAPQTG LKEHE I+PNSLGQLS +P RLWS A G GS SIFGDFGQVK    QL SNGKEF  TKQ   HGL+KLNTAPFSIYPGD K S+DAQK SPV
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKE---QLDSNGKEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPV

Query:  FSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRH
        FSLQSPL+EYHNRFELGFGQPL C NYPYM+QHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRAKAMM+N+ ARTRKPY+HESRH
Subjt:  FSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRH

Query:  LHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAE
        LHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLAE
Subjt:  LHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAE

Query:  IIDGGGHGMVLPKWVAAADNCCDLC
        IIDGGGHGMVLPKWVAAADNCCDLC
Subjt:  IIDGGGHGMVLPKWVAAADNCCDLC

A0A1S3B7N7 Nuclear transcription factor Y subunit5.6e-14983.74Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSP
        MAPQTG LKEHE I+PNSLGQLS SP RLWS AFG G  SIFGDFGQVK    +QL SNGKEF  TKQ  +HGL+KLNTAPFSIYPGD K S+DAQK SP
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSP

Query:  VFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESR
        VFSLQSPL+EYHNRFELGFGQPL C NYPYMEQHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRAKAMM+N+ ARTRKPY+HESR
Subjt:  VFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESR

Query:  HLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA
        HLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLA
Subjt:  HLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA

Query:  EIIDGGGHGMVLPKWVAAADNCCDLC
        EIIDGGGHGMVLPKWVAAADNCCDLC
Subjt:  EIIDGGGHGMVLPKWVAAADNCCDLC

A0A6J1DDB6 Nuclear transcription factor Y subunit2.9e-15084.5Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQAT----HGLEKLNTAPFSIYPGDTKNSVDAQK
        MAPQTGYLKEHEGIVPNSLGQLSSSP RLWS AFG GS +IFGDFGQ+K    EQL SNGKEF   KQA     HGLEK+NTAPFSIYPGD KNSVDAQK
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNGKEFAATKQAT----HGLEKLNTAPFSIYPGDTKNSVDAQK

Query:  HSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIH
         SPVFSLQSPLSEYH RFELGFGQP+ C NYPYMEQHYGILSAYGPQIPGRVMLPM LTTDD PIYVNAKQYHGIIRRRQIRAKAMM+NR ARTRKPY+H
Subjt:  HSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIH

Query:  ESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQ
        ESRHLHAMRRPRGSGGRFLN KN  + K S+  KKVD+VNLS+ TGSQCS VLQSESGTLNS NEAK GRGFNL SSEV SMFSRGLQRFQI+H+ PSMQ
Subjt:  ESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQ

Query:  SLAEIIDGGGHGMVLPKWVAAADNCCDLC
        SLAEIIDGGGHGMVLPKWVAAADNCCDLC
Subjt:  SLAEIIDGGGHGMVLPKWVAAADNCCDLC

A0A6J1GVR8 Nuclear transcription factor Y subunit4.2e-18198.14Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQ
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ

Query:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
        SPLSEYHN FELGF QPLTCENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCCDLCF
        GGHGMVLPKWVAAADNCCDLCF
Subjt:  GGHGMVLPKWVAAADNCCDLCF

A0A6J1KTV1 Nuclear transcription factor Y subunit5.9e-17596.27Show/hide
Query:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ
        MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQ  HGLEKLNTAPFSIYPGDTKNSV AQK SPVFS  
Subjt:  MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQ

Query:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
          LSEYHN FELGFGQPL CENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM
Subjt:  SPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAM

Query:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
        RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Subjt:  RRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG

Query:  GGHGMVLPKWVAAADNCCDLCF
        GGHGMVLPKWVAAA+NCCDLCF
Subjt:  GGHGMVLPKWVAAADNCCDLCF

SwissProt top hitse value%identityAlignment
Q8LFU0 Nuclear transcription factor Y subunit A-101.1e-4044.44Show/hide
Query:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG
        +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T  F+  PG  K+S D  K    F++QS        FE GF 
Subjt:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG

Query:  QPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM
        QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H SRHLHAMRRPRGSGGRFLN 
Subjt:  QPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM

Query:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM
        K              D    S  + SQ SEV   E+ T+NS  EA E    NL  S V+SM
Subjt:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM

Q8VY64 Nuclear transcription factor Y subunit A-43.9e-2241.72Show/hide
Query:  FGQPLTCENYPYMEQHY---------------GI-LSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHL
        + +P+    YPY + +Y               G+ L   G Q PG   +P++    +EP++VNAKQYHGI+RRRQ RAK   +NR  + +KPY+HESRHL
Subjt:  FGQPLTCENYPYMEQHY---------------GI-LSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHL

Query:  HAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSE
        HA+RRPRG GGRFLN K +  +       K ++   SD   S+ S  L+SE
Subjt:  HAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSE

Q93ZH2 Nuclear transcription factor Y subunit A-31.7e-2248Show/hide
Query:  NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG
        ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGG
Subjt:  NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG

Query:  RFLNMKNQPNEKSSMVPKKVDDVNL
        RFLN K    E      ++ +   L
Subjt:  RFLNMKNQPNEKSSMVPKKVDDVNL

Q9LVJ7 Nuclear transcription factor Y subunit A-64.7e-2050Show/hide
Query:  NYPYMEQHYGILSAYGPQI----PGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQP
        ++PY  QH    +   PQI    P R+ LP  +  ++EPI+VNAKQY  I+RRR+ RAK   +N+  + RKPY+HESRHLHA++R RGSGGRFLN K   
Subjt:  NYPYMEQHYGILSAYGPQI----PGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQP

Query:  NEKSSMVP
           SS+ P
Subjt:  NEKSSMVP

Q9M9X4 Nuclear transcription factor Y subunit A-26.3e-4141.67Show/hide
Query:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLNTAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFEL
        L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH         FS+  GD K+  +  + H   FS+QSP        EL
Subjt:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLNTAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFEL

Query:  GFGQPLTCENYPYME-QHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSG
        GF QP     YPY E Q+YG++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R RKPY+H SRHLHA+RRPRGSG
Subjt:  GFGQPLTCENYPYME-QHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSG

Query:  GRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG
        GRFLN K+Q  E S    KK      +        + SQ SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Subjt:  GRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG

Query:  GGHGMVLP-KWVAAA----DNCCD
           GMV+P KW+AAA    + CC+
Subjt:  GGHGMVLP-KWVAAA----DNCCD

Arabidopsis top hitse value%identityAlignment
AT1G72830.1 nuclear factor Y, subunit A31.2e-2348Show/hide
Query:  NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG
        ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGG
Subjt:  NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGG

Query:  RFLNMKNQPNEKSSMVPKKVDDVNL
        RFLN K    E      ++ +   L
Subjt:  RFLNMKNQPNEKSSMVPKKVDDVNL

AT3G05690.1 nuclear factor Y, subunit A24.5e-4241.67Show/hide
Query:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLNTAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFEL
        L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH         FS+  GD K+  +  + H   FS+QSP        EL
Subjt:  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLNTAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFEL

Query:  GFGQPLTCENYPYME-QHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSG
        GF QP     YPY E Q+YG++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R RKPY+H SRHLHA+RRPRGSG
Subjt:  GFGQPLTCENYPYME-QHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTRKPYIHESRHLHAMRRPRGSG

Query:  GRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG
        GRFLN K+Q  E S    KK      +        + SQ SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Subjt:  GRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG

Query:  GGHGMVLP-KWVAAA----DNCCD
           GMV+P KW+AAA    + CC+
Subjt:  GGHGMVLP-KWVAAA----DNCCD

AT5G06510.1 nuclear factor Y, subunit A107.7e-4244.44Show/hide
Query:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG
        +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T  F+  PG  K+S D  K    F++QS        FE GF 
Subjt:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG

Query:  QPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM
        QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H SRHLHAMRRPRGSGGRFLN 
Subjt:  QPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM

Query:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM
        K              D    S  + SQ SEV   E+ T+NS  EA E    NL  S V+SM
Subjt:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM

AT5G06510.2 nuclear factor Y, subunit A107.7e-4244.44Show/hide
Query:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG
        +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T  F+  PG  K+S D  K    F++QS        FE GF 
Subjt:  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG

Query:  QPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM
        QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H SRHLHAMRRPRGSGGRFLN 
Subjt:  QPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNM

Query:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM
        K              D    S  + SQ SEV   E+ T+NS  EA E    NL  S V+SM
Subjt:  KNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM

AT5G06510.3 nuclear factor Y, subunit A108.8e-3849.23Show/hide
Query:  GDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMM
        G  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SAYG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA  
Subjt:  GDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMM

Query:  KNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM
          + +R RKPY+H SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+NS  EA E    NL  S V+SM
Subjt:  KNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGG
TTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACA
CTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTC
GAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCC
AATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTG
CAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAG
AGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGA
AGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCAC
TGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGG
TTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACA
CTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTC
GAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCC
AATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTG
CAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAG
AGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGA
AGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCAC
TGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA
Protein sequenceShow/hide protein sequence
MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRF
ELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEK
SSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLPKWVAAADNCCDLCF