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Carg16232 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16232
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:2655170..2655741
RNA-Seq ExpressionCarg16232
SyntenyCarg16232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596633.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.4e-04100Show/hide
Query:  MSKWIQPDPLSMSSNRKNSFELKG
        MSKWIQPDPLSMSSNRKNSFELKG
Subjt:  MSKWIQPDPLSMSSNRKNSFELKG
KAG7028172.1 hypothetical protein SDJN02_09352 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-33100Show/hide
Query:  MSKWIQPDPLSMSSNRKNSFELKGVYGIIIAGWSSNWGAAVRSPLILGPIGQKWGPGRSLFRTRVDKWKS
        MSKWIQPDPLSMSSNRKNSFELKGVYGIIIAGWSSNWGAAVRSPLILGPIGQKWGPGRSLFRTRVDKWKS
Subjt:  MSKWIQPDPLSMSSNRKNSFELKGVYGIIIAGWSSNWGAAVRSPLILGPIGQKWGPGRSLFRTRVDKWKS
TrEMBL top hitse value%identityAlignment
A0A3B6HSF3 Uncharacterized protein3.0e-0746.67Show/hide
Query:  GVYGIIIAGWSSNWGAAVRSPLILGPIGQKW----------------------------GPGRSLFRTRVDKWKS
        GVYGIIIAGWSS  GAAV+SP+I GPIG KW                              GRSLFR  ++KWKS
Subjt:  GVYGIIIAGWSSNWGAAVRSPLILGPIGQKW----------------------------GPGRSLFRTRVDKWKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAATGGATACAGCCGGATCCTCTCTCCATGAGCAGCAACAGAAAGAACAGTTTTGAATTAAAAGGTGTTTATGGAATTATTATCGCGGGTTGGTCTAGTAATTG
GGGGGCGGCTGTTCGGTCGCCTCTGATACTAGGACCAATAGGTCAAAAATGGGGTCCTGGTCGATCACTTTTCCGGACTAGGGTCGATAAGTGGAAGTCATAA
mRNA sequenceShow/hide mRNA sequence
TTTCTCCTCAACACTTATCCCCCCTTATAAATGAGCAATGTCAAATGAGCAAATGGATACAGCCGGATCCTCTCTCCATGAGCAGCAACAGAAAGAACAGTTTTGAATTA
AAAGGTGTTTATGGAATTATTATCGCGGGTTGGTCTAGTAATTGGGGGGCGGCTGTTCGGTCGCCTCTGATACTAGGACCAATAGGTCAAAAATGGGGTCCTGGTCGATC
ACTTTTCCGGACTAGGGTCGATAAGTGGAAGTCATAA
Protein sequenceShow/hide protein sequence
MSKWIQPDPLSMSSNRKNSFELKGVYGIIIAGWSSNWGAAVRSPLILGPIGQKWGPGRSLFRTRVDKWKS