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Carg16233 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16233
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFra a 1-associated protein
Genome locationCarg_Chr06:2657356..2660434
RNA-Seq ExpressionCarg16233
SyntenyCarg16233
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596634.1 Fra a 1-associated protein, partial [Cucurbita argyrosperma subsp. sororia]9.7e-97100Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
XP_022940131.1 uncharacterized protein LOC111445845 [Cucurbita moschata]1.4e-9598.89Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRC TRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNE+VNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
XP_023005676.1 uncharacterized protein LOC111498606 [Cucurbita maxima]2.0e-9497.22Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MGGVWRG SGELDSPAGDGVTSNNPSTWSSGDRC TRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNE+VNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPP+F+REPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
XP_023539788.1 uncharacterized protein LOC111800367 [Cucurbita pepo subsp. pepo]3.1e-9598.33Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRC TRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNE+VNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLF+REPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
XP_038905970.1 fra a 1-associated protein [Benincasa hispida]2.0e-7075.38Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MG VWR  +GELDS A D    NN +  S  DRC TRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT++MV NRSFS G
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMR---------------QNEPDSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+RE SSSPSMR               Q EPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMR---------------QNEPDSGHVDLSGLARDV
TrEMBL top hitse value%identityAlignment
A0A0A0LGU7 Uncharacterized protein4.2e-6167.68Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MG VWR  + + DS A D    NN ++ SS D C TR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SN+E TEEDVT++MV NRSFS G
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  S--SEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ----------------NEPDSGHVDLSGLARDV
        S  SE++P +FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+R+ SSS SMR+                 EPDSGHVDLSGLARDV
Subjt:  S--SEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ----------------NEPDSGHVDLSGLARDV
A0A1S3B6X7 uncharacterized protein LOC1034867046.2e-6570.26Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MG VW   +G+LDS A DG   +N +  SS DRC TR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSN+EFTEEDVT++MV NRSF  G
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV
        SSE++PF+FPGLRSDI+AIE SLFGSMKGFF+AAEEI+NGFFGS RDPPLF+R+ SS  SMR+                EPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV
A0A6J1DDK9 uncharacterized protein LOC1110193939.9e-6371.28Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MG VWR   GE D  AGD       S  SSGDRC TRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSN+EFTEEDV +++V NRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV
        +S +QPF FPGLRSDIEAIE +LFGSMKGFF+AAEEI+NGFFG  RDP  F  E SSSPSMR+               NEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQ---------------NEPDSGHVDLSGLARDV
A0A6J1FHK7 uncharacterized protein LOC1114458456.8e-9698.89Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRC TRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNE+VNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
A0A6J1KVN4 uncharacterized protein LOC1114986069.8e-9597.22Show/hide
Query:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG
        MGGVWRG SGELDSPAGDGVTSNNPSTWSSGDRC TRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNE+VNNRSFSSG
Subjt:  MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSG

Query:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
        SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPP+F+REPSSSPSMRQNEPDSGHVDLSGLARDV
Subjt:  SSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV
SwissProt top hitse value%identityAlignment
W5X2N3 Fra a 1-associated protein4.0e-4551Show/hide
Query:  MGGVWRG---ASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSF
        MG VW+      G ++  A D       S    GDRC TRKVV++QCKTEEVEPGKF+RKCE+TEE+LRDC+GRP+EV+QSN+E+TE+DVT++++   S 
Subjt:  MGGVWRG---ASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSF

Query:  SSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSS-PSMRQNEP----------------DSGHVDLSGLARDV
        S GS++   FNFPGL+ DI+ IEH+  G +  FF+AAE+++NGFF SF  P +F   PS+S PS R+  P                 SG VDLSGLARDV
Subjt:  SSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSS-PSMRQNEP----------------DSGHVDLSGLARDV
Arabidopsis top hitse value%identityAlignment
AT2G35900.1 unknown protein4.6e-3643Show/hide
Query:  MGGVW-------RGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVN
        MG +W       +  +   D P GD          ++ + C T  VV+SQCKTEEVEPGKFVRKC++TEEILR C G+P EV+QSN E TEEDVT++MV 
Subjt:  MGGVW-------RGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVN

Query:  NRSFSSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREP----SSSPSMRQNEPD---------SGHVDLSGLARDV
          +  +   +  P NFPGLR D++AIE      MK FFDAAEE+ +  F    D    +R       + P + ++  D         SG +DLSGLA+DV
Subjt:  NRSFSSGSSEYQPFNFPGLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREP----SSSPSMRQNEPD---------SGHVDLSGLARDV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGGTATGGAGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTTGACTAG
AAAAGTGGTGAAGTCGCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGCCGGTCG
AAGTGATACAGTCCAATAGGGAATTTACAGAAGAGGATGTAACGAATGAGATGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCT
GGACTTCGCAGCGATATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGA
TCCACCCCTATTCAGCAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGA
mRNA sequenceShow/hide mRNA sequence
CAAGCCGTGGTGATCAAGAATCGAATTAAACTTACTTCTTCTCAATCCGTGGTGCTGAAGATTCTCGGAGAGAGAGAGACTTGGAGCTTTCGAAAATGGGTGGGGTATGG
AGAGGCGCGTCTGGCGAATTGGATTCACCCGCCGGCGACGGTGTTACGTCTAATAATCCCAGCACTTGGTCTTCCGGCGATCGATGTTTGACTAGAAAAGTGGTGAAGTC
GCAGTGCAAGACGGAGGAGGTCGAGCCCGGGAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTCAGAGACTGCATCGGAAGGCCGGTCGAAGTGATACAGTCCA
ATAGGGAATTTACAGAAGAGGATGTAACGAATGAGATGGTTAATAATAGGTCATTCTCGTCAGGATCATCAGAATATCAACCATTTAATTTCCCTGGACTTCGCAGCGAT
ATTGAAGCCATTGAACACAGCCTCTTCGGTAGCATGAAGGGGTTCTTTGATGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGCTCTTTCAGAGATCCACCCCTATTCAG
CAGAGAGCCTTCGTCCTCCCCATCGATGAGACAAAACGAGCCCGACTCCGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTGATTACCCAGAATGAACCGGATCG
TCCTTTCTTTTACAGATGTTAGATACAACAAGGACAGTATATCATCATTATCGTGGTGGATGTAGAATTGATAATCAGTTGAATAAATGTTTTTCCAGTCTAAGCATTGT
TATCCAATATGTGCTCATAGATATTGACCTATTGGTTGATTATGTGTGGAATCTGACTTTTGAGTGGTGCAAAATGGTTGGTTTTGAAAAACCAACCAAGCTTTTAGTTG
TAAAAAGCTTTACTTTTGTAATGCATGAACTTAATAGGAAGAATCTTTTACGTTCATAGTGGAGGGCCATTGACCCAGTTTATATTTTGTATGAGATAATGAT
Protein sequenceShow/hide protein sequence
MGGVWRGASGELDSPAGDGVTSNNPSTWSSGDRCLTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNREFTEEDVTNEMVNNRSFSSGSSEYQPFNFP
GLRSDIEAIEHSLFGSMKGFFDAAEEIRNGFFGSFRDPPLFSREPSSSPSMRQNEPDSGHVDLSGLARDV