; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16257 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16257
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionserine/arginine-rich SC35-like splicing factor SCL33
Genome locationCarg_Chr06:2830249..2833440
RNA-Seq ExpressionCarg16257
SyntenyCarg16257
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596659.1 Serine/arginine-rich SC35-like splicing factor SCL30A, partial [Cucurbita argyrosperma subsp. sororia]9.8e-9199.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDP+DAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

KAG7028197.1 Serine/arginine-rich SC35-like splicing factor SCL30A [Cucurbita argyrosperma subsp. argyrosperma]5.9e-120100Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSRWAVILCSQSRLGTEGTGSDPTQGHHMIQGT
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSRWAVILCSQSRLGTEGTGSDPTQGHHMIQGT
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSRWAVILCSQSRLGTEGTGSDPTQGHHMIQGT

Query:  VAIAEAEAGAGAIAEAILGE
        VAIAEAEAGAGAIAEAILGE
Subjt:  VAIAEAEAGAGAIAEAILGE

XP_023005833.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X1 [Cucurbita maxima]1.3e-9099.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

XP_023005834.1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X2 [Cucurbita maxima]1.3e-9099.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

XP_023539101.1 serine/arginine-rich SC35-like splicing factor SCL33 [Cucurbita pepo subsp. pepo]4.4e-91100Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

TrEMBL top hitse value%identityAlignment
A0A6J1G9Y1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X39.8e-8997.65Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDP+DAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSS GRSYSYRRSPLQYSQSPPHGRKYS SPEYYSPARS RYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

A0A6J1G9Y3 serine/arginine-rich SC35-like splicing factor SCL33 isoform X19.8e-8997.65Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDP+DAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSS GRSYSYRRSPLQYSQSPPHGRKYS SPEYYSPARS RYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

A0A6J1KYI3 serine/arginine-rich SC35-like splicing factor SCL33 isoform X36.2e-9199.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

A0A6J1L0E4 serine/arginine-rich SC35-like splicing factor SCL33 isoform X26.2e-9199.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

A0A6J1L3A1 serine/arginine-rich SC35-like splicing factor SCL33 isoform X16.2e-9199.41Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
        MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFG+FGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDG

Query:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
Subjt:  QVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

SwissProt top hitse value%identityAlignment
O75494 Serine/arginine-rich splicing factor 105.9e-2245.21Show/hide
Query:  TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARD------SSR
        TSL VRN+  D R EDLR  FGR+GP+ D+Y+P D+Y+ +PRGF +VQ+ D  DA DA + LD + + GR++ + FA+ +RK P QM+A++      SSR
Subjt:  TSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARD------SSR

Query:  GRSYS-YRRSPLQYSQSPPHGRKYSRSPEY-----YSPARSRRYSR
           Y  YRRS    S+S    R  SRS +Y     YSP  SR   R
Subjt:  GRSYS-YRRSPLQYSQSPPHGRKYSRSPEY-----YSPARSRRYSR

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL283.4e-3046.93Show/hide
Query:  RGRSYSYSP-----SPPRSY-----GRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADA
        R RS SYSP     SPPR        R     S R H   G   P+ LL+RNL  D RP DLR  F RFGPLKDIYLPR+YY+G+PRGFGFV+Y    DA
Subjt:  RGRSYSYSP-----SPPRSY-----GRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADA

Query:  ADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        A+A   ++ +V+ GRE+ +VFAEENRK P++MR  + + GR   Y+R+    S   P  R  S S     P R  R+S+
Subjt:  ADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL309.0e-3146.67Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSP----RGHGGRG------RDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPAD
        MR  S  Y   P R YG R RS  P    RG+GG G           SLLVRN+  DCRPE+LR  F RFGP++D+Y+PRDYYSG+PRGF FV+++D  D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSP----RGHGGRG------RDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPAD

Query:  AADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        A +A+  ++ +   GRE+TVV A E+RKRPE+MR +  +R R  S  R    + +S       SRSP   S +RSR  SR
Subjt:  AADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A9.9e-5466.85Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGH--GGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYEL
        MRGR  SY+PSPPR YGRR RS SPRG   G R  DLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G PRGFGF+Q++DPADAA+AK+++
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGH--GGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYEL

Query:  DGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSY---RRSPLQYSQSPP--HGRK-YSRSPEYYSPARSRRYSR
        DG +LLGRELTVVFAEENRK+P +MR RD   GRS  +   RRSP +YS+SPP   GR+  SRS  Y SP   R  SR
Subjt:  DGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSY---RRSPLQYSQSPP--HGRK-YSRSPEYYSPARSRRYSR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL338.7e-5868.75Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELD
        MRGR  SY+PSPPR YGRR RS SPRG +GGR RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G PRGFGFVQ++DPADAADAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELD

Query:  GQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR
        G +LLGRELTVVFAEENRK+P +MRAR+   GR    RR+P +Y   S+SPP   GR  SRS +YYSP   R + R
Subjt:  GQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 336.1e-5968.75Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELD
        MRGR  SY+PSPPR YGRR RS SPRG +GGR RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G PRGFGFVQ++DPADAADAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELD

Query:  GQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR
        G +LLGRELTVVFAEENRK+P +MRAR+   GR    RR+P +Y   S+SPP   GR  SRS +YYSP   R + R
Subjt:  GQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR

AT1G55310.2 SC35-like splicing factor 336.1e-5968.75Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELD
        MRGR  SY+PSPPR YGRR RS SPRG +GGR RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G PRGFGFVQ++DPADAADAK+ +D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELD

Query:  GQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR
        G +LLGRELTVVFAEENRK+P +MRAR+   GR    RR+P +Y   S+SPP   GR  SRS +YYSP   R + R
Subjt:  GQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR

AT1G55310.3 SC35-like splicing factor 335.4e-5564.02Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGK------------PRGFGFVQYID
        MRGR  SY+PSPPR YGRR RS SPRG +GGR RDLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G             PRGFGFVQ++D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRG-HGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGK------------PRGFGFVQYID

Query:  PADAADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRG-RSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR
        PADAADAK+ +DG +LLGRELTVVFAEENRK+P +MRAR+   G R    RR+P +Y   S+SPP   GR  SRS +YYSP   R + R
Subjt:  PADAADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRG-RSYSYRRSPLQY---SQSPP--HGRKYSRSPEYYSPARSRRYSR

AT3G13570.1 SC35-like splicing factor 30A7.0e-5566.85Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSPRGH--GGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYEL
        MRGR  SY+PSPPR YGRR RS SPRG   G R  DLPTSLLVRNLRHDCR EDLR  F +FGP+KDIYLPRDYY+G PRGFGF+Q++DPADAA+AK+++
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSPRGH--GGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYEL

Query:  DGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSY---RRSPLQYSQSPP--HGRK-YSRSPEYYSPARSRRYSR
        DG +LLGRELTVVFAEENRK+P +MR RD   GRS  +   RRSP +YS+SPP   GR+  SRS  Y SP   R  SR
Subjt:  DGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSY---RRSPLQYSQSPP--HGRK-YSRSPEYYSPARSRRYSR

AT3G55460.1 SC35-like splicing factor 306.4e-3246.67Show/hide
Query:  MRGRSYSYSPSPPRSYGRRNRSLSP----RGHGGRG------RDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPAD
        MR  S  Y   P R YG R RS  P    RG+GG G           SLLVRN+  DCRPE+LR  F RFGP++D+Y+PRDYYSG+PRGF FV+++D  D
Subjt:  MRGRSYSYSPSPPRSYGRRNRSLSP----RGHGGRG------RDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPAD

Query:  AADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR
        A +A+  ++ +   GRE+TVV A E+RKRPE+MR +  +R R  S  R    + +S       SRSP   S +RSR  SR
Subjt:  AADAKYELDGQVLLGRELTVVFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTCGAAGTTACAGTTACAGTCCATCGCCACCAAGGAGTTATGGCAGGAGAAATCGAAGCCTTAGCCCAAGGGGTCATGGAGGCCGTGGAAGGGATCTGCCGAC
AAGTCTTTTGGTTCGGAACCTAAGGCATGACTGCAGGCCAGAGGACCTGCGTGGATTATTTGGGCGGTTTGGTCCTCTGAAGGACATCTACTTGCCACGAGATTATTATT
CCGGAAAACCACGCGGCTTTGGGTTTGTTCAGTACATTGATCCTGCTGATGCTGCTGATGCAAAGTATGAACTAGATGGCCAAGTTCTATTGGGTCGTGAATTAACTGTT
GTGTTCGCTGAGGAGAACAGGAAGAGACCTGAACAGATGAGAGCAAGAGACTCATCAAGGGGTCGGTCCTACAGTTACAGGCGTTCCCCGCTGCAATATTCTCAATCACC
CCCCCATGGTCGAAAATATTCACGTAGTCCTGAATATTATTCCCCTGCTCGGTCTAGACGATATTCAAGGTGGGCAGTTATTCTGTGTAGTCAATCTCGCCTAGGGACCG
AAGGTACAGGGAGCGATCCTACTCAAGGTCACCATATGATTCAAGGGACCGTGGCTATAGCCGAAGCCGAAGCAGGAGCCGGAGCTATAGCCGAAGCTATTCTAGGTGAG
TAA
mRNA sequenceShow/hide mRNA sequence
AATCCGAGGGAAGTTTCTCGAACATAAAGGGCGTTCGAGGTAGAGGAGACAAAAGCCCCAAGGAAGATTGCAGAATTTGTCTCTGGAGGAAAAGGTTCCGTTCGATTTAT
CGGTTCTCTGATTCTCAGGAAATTGAAAATGAGAGGTCGAAGTTACAGTTACAGTCCATCGCCACCAAGGAGTTATGGCAGGAGAAATCGAAGCCTTAGCCCAAGGGGTC
ATGGAGGCCGTGGAAGGGATCTGCCGACAAGTCTTTTGGTTCGGAACCTAAGGCATGACTGCAGGCCAGAGGACCTGCGTGGATTATTTGGGCGGTTTGGTCCTCTGAAG
GACATCTACTTGCCACGAGATTATTATTCCGGAAAACCACGCGGCTTTGGGTTTGTTCAGTACATTGATCCTGCTGATGCTGCTGATGCAAAGTATGAACTAGATGGCCA
AGTTCTATTGGGTCGTGAATTAACTGTTGTGTTCGCTGAGGAGAACAGGAAGAGACCTGAACAGATGAGAGCAAGAGACTCATCAAGGGGTCGGTCCTACAGTTACAGGC
GTTCCCCGCTGCAATATTCTCAATCACCCCCCCATGGTCGAAAATATTCACGTAGTCCTGAATATTATTCCCCTGCTCGGTCTAGACGATATTCAAGGTGGGCAGTTATT
CTGTGTAGTCAATCTCGCCTAGGGACCGAAGGTACAGGGAGCGATCCTACTCAAGGTCACCATATGATTCAAGGGACCGTGGCTATAGCCGAAGCCGAAGCAGGAGCCGG
AGCTATAGCCGAAGCTATTCTAGGTGAGTAAAAAATACTTCCAAGTTACAAAGTGGGTTAAGCTTAGTTAGCTGAGTTTTCTAAAAACCCAGAAACTATTAAAAGGTAGA
GAGATGTTGGGATTTCGGAAGTCTGTATATGATTTAGAAAATGGTTTGGTCTTTTCTTTTAGAGCCACTGATTTCATGTTCTTATTTTAAAATGTACGGACCATGTGGTG
GTTTTTTCTATGTAGAATGGAACCTTGGGAATTTTAGGCCCTTTTTACCCCC
Protein sequenceShow/hide protein sequence
MRGRSYSYSPSPPRSYGRRNRSLSPRGHGGRGRDLPTSLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGKPRGFGFVQYIDPADAADAKYELDGQVLLGRELTV
VFAEENRKRPEQMRARDSSRGRSYSYRRSPLQYSQSPPHGRKYSRSPEYYSPARSRRYSRWAVILCSQSRLGTEGTGSDPTQGHHMIQGTVAIAEAEAGAGAIAEAILGE