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Carg16278 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16278
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAD(P)-binding Rossmann-fold superfamily protein
Genome locationCarg_Chr06:2964328..2965289
RNA-Seq ExpressionCarg16278
SyntenyCarg16278
Gene Ontology termsNA
InterPro domainsIPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2055214.1 hypothetical protein ES319_A11G020700v1, partial [Gossypium barbadense]1.9e-0866.67Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K     V E  P  R+I     GATSGIGAETARVLAKRGAR+VIP RNLKAA E KARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
KAG6596683.1 Short-chain dehydrogenase TIC 32, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.3e-29100Show/hide
Query:  MPVIPVTKKGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        MPVIPVTKKGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
Subjt:  MPVIPVTKKGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
TYG92321.1 hypothetical protein ES288_A11G020700v1 [Gossypium darwinii]1.9e-0866.67Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K     V E  P  R+I     GATSGIGAETARVLAKRGAR+VIP RNLKAA E KARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
XP_010919277.1 short-chain dehydrogenase TIC 32, chloroplastic [Elaeis guineensis]1.9e-0865Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K     V E  P  R+I     GATSGIGAETARVLAKRGAR+V+P RNLKAA E KARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
XP_022773537.1 short-chain dehydrogenase TIC 32, chloroplastic-like [Durio zibethinus]1.4e-0866.67Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K    +V E  P  R+I     GATSGIGAETARVLAKRGAR+V+P RNLKAA EVKARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
TrEMBL top hitse value%identityAlignment
A0A1R3IB47 Short-chain dehydrogenase/reductase SDR9.1e-0965Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K    +V E  P  R+I     GATSGIGAETARVLAKRGAR+V+P RNLKAA E KARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
A0A5D2N5M1 Uncharacterized protein9.1e-0966.67Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K     V E  P  R+I     GATSGIGAETARVLAKRGAR+VIP RNLKAA E KARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
A0A6I9R429 short-chain dehydrogenase TIC 32, chloroplastic9.1e-0965Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K     V E  P  R+I     GATSGIGAETARVLAKRGAR+V+P RNLKAA E KARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
A0A6P4MJJ3 short-chain dehydrogenase TIC 32, chloroplastic-like9.1e-0966.67Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K     V E  P  R+I     GATSGIGAETARVLAKRGAR+VIP RNLKAA E KARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
A0A6P6B8K9 short-chain dehydrogenase TIC 32, chloroplastic-like6.9e-0966.67Show/hide
Query:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        K    +V E  P  R+I     GATSGIGAETARVLAKRGAR+V+P RNLKAA EVKARI
Subjt:  KGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
SwissProt top hitse value%identityAlignment
Q6RVV4 Short-chain dehydrogenase TIC 32, chloroplastic3.8e-0463.16Show/hide
Query:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        GA+SGIGAET RVLA RGA +++ VRN+ AA +VK  I
Subjt:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
Arabidopsis top hitse value%identityAlignment
AT1G64590.1 NAD(P)-binding Rossmann-fold superfamily protein1.4e-0962.75Show/hide
Query:  CGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        C    R++     GATSGIGAETARVLAKRGAR+V+P R++K A E KARI
Subjt:  CGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
AT4G24050.1 NAD(P)-binding Rossmann-fold superfamily protein1.8e-0969.57Show/hide
Query:  RTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        R+I     GATSGIGAETARVLAKRGAR++ P RN+KAA E K RI
Subjt:  RTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
AT5G50130.1 NAD(P)-binding Rossmann-fold superfamily protein6.4e-0771.05Show/hide
Query:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        G TSGIGAETARVLAKRG R+V+ VR++K A  VK RI
Subjt:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
AT5G50130.2 NAD(P)-binding Rossmann-fold superfamily protein6.4e-0771.05Show/hide
Query:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
        G TSGIGAETARVLAKRG R+V+ VR++K A  VK RI
Subjt:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI
AT5G53100.1 NAD(P)-binding Rossmann-fold superfamily protein6.0e-0564.71Show/hide
Query:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEV
        G+TSGIG+ETAR LA+ GA +V+ VRN+KAA E+
Subjt:  GATSGIGAETARVLAKRGARIVIPVRNLKAAVEV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTGATTCCGGTGACAAAGAAGGGGCAGTTCAGAAGAGTGTTCGAGTGTGGGCCGGCCTACAGGACCATTGGTGGTCCCCATTGGGGAGCGACGTCGGGAATCGG
AGCGGAGACGGCAAGAGTCTTAGCCAAGCGCGGCGCCAGGATCGTCATTCCGGTTCGCAACCTTAAAGCCGCCGTGGAAGTCAAGGCGCGAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGTGATTCCGGTGACAAAGAAGGGGCAGTTCAGAAGAGTGTTCGAGTGTGGGCCGGCCTACAGGACCATTGGTGGTCCCCATTGGGGAGCGACGTCGGGAATCGG
AGCGGAGACGGCAAGAGTCTTAGCCAAGCGCGGCGCCAGGATCGTCATTCCGGTTCGCAACCTTAAAGCCGCCGTGGAAGTCAAGGCGCGAATCTGA
Protein sequenceShow/hide protein sequence
MPVIPVTKKGQFRRVFECGPAYRTIGGPHWGATSGIGAETARVLAKRGARIVIPVRNLKAAVEVKARI