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Carg16282 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16282
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein-tyrosine-phosphatase PTP1
Genome locationCarg_Chr06:2982531..2983531
RNA-Seq ExpressionCarg16282
SyntenyCarg16282
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592235.1 Protein-tyrosine-phosphatase PTP1, partial [Cucurbita argyrosperma subsp. sororia]8.3e-0578.79Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
        L+AQRI ASDM++NCSVAL NVNISKNRYTD++
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
KAG6596688.1 hypothetical protein SDJN03_09868, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1290.91Show/hide
Query:  SRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDLMRL
        SRIQLLPEFLKAQR AASDMRRNCSVALGNVNISKNRYTD++ L
Subjt:  SRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDLMRL
KAG7020974.1 Protein-tyrosine-phosphatase PTP1, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-0578.79Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
        L+AQRI ASDM++NCSVAL NVNISKNRYTD++
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
KAG7028222.1 hypothetical protein SDJN02_09402, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-44100Show/hide
Query:  MTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDLMRLEAYLTLVRITDLLHGVISMQALFP
        MTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDLMRLEAYLTLVRITDLLHGVISMQALFP
Subjt:  MTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDLMRLEAYLTLVRITDLLHGVISMQALFP
XP_022932558.1 protein-tyrosine-phosphatase PTP1 [Cucurbita moschata]8.3e-0578.79Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
        L+AQRI ASDM++NCSVAL NVNISKNRYTD++
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
TrEMBL top hitse value%identityAlignment
A0A6J1F227 protein-tyrosine-phosphatase PTP14.0e-0578.79Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
        L+AQRI ASDM++NCSVAL NVNISKNRYTD++
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
A0A6J1IKU0 protein-tyrosine-phosphatase PTP14.0e-0578.79Show/hide
Query:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
        L+AQRI ASDM++NCSVAL NVNISKNRYTD++
Subjt:  LKAQRIAASDMRRNCSVALGNVNISKNRYTDLM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAATCTGTTGGAACGGGAAGCAAGTCGACGATCCTAATGCAATCGATTTGGACATTGACAAGCAATTCCTTGGCCTTCCTCTATCAAGTCAGCCGTATTCAACT
TCTTCCTGAATTTTTGAAGGCCCAGAGAATAGCTGCATCGGATATGAGGAGAAATTGCTCTGTGGCTCTTGGCAATGTCAACATCAGTAAAAATCGTTACACGGATTTGA
TGAGACTAGAGGCGTACTTGACTCTTGTAAGGATTACAGACCTTCTGCATGGGGTTATATCAATGCAAGCTTTATTTCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAATCTGTTGGAACGGGAAGCAAGTCGACGATCCTAATGCAATCGATTTGGACATTGACAAGCAATTCCTTGGCCTTCCTCTATCAAGTCAGCCGTATTCAACT
TCTTCCTGAATTTTTGAAGGCCCAGAGAATAGCTGCATCGGATATGAGGAGAAATTGCTCTGTGGCTCTTGGCAATGTCAACATCAGTAAAAATCGTTACACGGATTTGA
TGAGACTAGAGGCGTACTTGACTCTTGTAAGGATTACAGACCTTCTGCATGGGGTTATATCAATGCAAGCTTTATTTCCGTAAGTGCAACAATTGATGTGCTTCTACTTA
GATAATATTTCAGTACAAGTTCTCTTTTGACTTTCCTCTCCATTGTCTATTTGAAGATTAGTTATTACCACACAAGGTCCATTACCACACACCTTATGAGGATTTCTGGA
TGCGATTTCTCGTGTGGCTCCTCGGGGCTTGTGTTTATTTATTTGCTGTTCTTGAGAAGTTCTTGGCTGTTCAACGCACCAATGTTTCATATGAATTTTGAATTGTACAT
TGTTGTATCGATAGTGCTACTGTTTGGGTGTGACGACTTGGAGCTTCTTTCTGCAGAAGAGCTACATACACCAAATTCACTTCTTGTTATTTTTAAT
Protein sequenceShow/hide protein sequence
MTKSVGTGSKSTILMQSIWTLTSNSLAFLYQVSRIQLLPEFLKAQRIAASDMRRNCSVALGNVNISKNRYTDLMRLEAYLTLVRITDLLHGVISMQALFP