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Carg16285 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16285
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionELL-associated factor 1-like
Genome locationCarg_Chr06:2994818..2995207
RNA-Seq ExpressionCarg16285
SyntenyCarg16285
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]6.6e-3164.8Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDE-RIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLE
        MA+KKSP+  RLKK+ IKLTA +RLC+  R+ S+RL SF SDDR  G+R  LED+ RI EN   RKLERASS+ Y  +E+DVD+R++IFI+ F RQLRLE
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDE-RIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLE

Query:  RQISLQLRYCRVNSSETESEEKSPP
        RQISLQLRY RVNS ETE E+ SPP
Subjt:  RQISLQLRYCRVNSSETESEEKSPP

KAG6577759.1 hypothetical protein SDJN03_25333, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2860.63Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLER
        MA+  +P++ R+KK+  KLTAF+RLC   R  SRR+RSF SD RTAGLRS L DE IVE  SVRKLER  S+   + EDDVD+R+QIFID F RQL LER
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLER

Query:  QISLQLRYCRVNSSETESEEKSPPYPS
        QISL+L Y  +NSSE + E +SPP+ S
Subjt:  QISLQLRYCRVNSSETESEEKSPPYPS

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]4.0e-60100Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLER
        MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLER
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLER

Query:  QISLQLRYCRVNSSETESEEKSPPYPSIR
        QISLQLRYCRVNSSETESEEKSPPYPSIR
Subjt:  QISLQLRYCRVNSSETESEEKSPPYPSIR

KAG7015798.1 hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2961.42Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLER
        MA+  +P++ R+KK+  KLTAF+RLC   R  SRR+RSF SD RTAGLRS L DE IVE  SVRKLER  S+   + EDDVD+R+QIFID F RQL LER
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLER

Query:  QISLQLRYCRVNSSETESEEKSPPYPS
        QISL+LRY  +NSSE + E +SPP+ S
Subjt:  QISLQLRYCRVNSSETESEEKSPPYPS

XP_022145292.1 uncharacterized protein LOC111014780 [Momordica charantia]2.4e-3671.54Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLR----LCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQL
        MA+KKSPL+ RLKK+  K+TA LR    LC+ARR+ S RLRSF   DRT GLRSFLEDE I EN S+R+LERASS  Y N EDDVDKRSQIFID FLR+L
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLR----LCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQL

Query:  RLERQISLQLRYCRVNSSETESEEKSPPYP
        RLERQISLQLRY R+NSS TE EE+SPP P
Subjt:  RLERQISLQLRYCRVNSSETESEEKSPPYP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein1.1e-2863.2Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGS-DDRTAGLRSFLEDE-RIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRL
        MA+KKSP+  RL+K+ +KL A LRLC+  RQ SRRL SF S DD+  G+R  LED+ RI E+  VRKLERASS+ Y  +E+DVD+R++IFI+ F RQLRL
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGS-DDRTAGLRSFLEDE-RIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRL

Query:  ERQISLQLRYCRVNSSETESEEKSP
        ERQISLQLRY RVNS ETE E++SP
Subjt:  ERQISLQLRYCRVNSSETESEEKSP

A0A1R3IU67 Uncharacterized protein9.7e-1244Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRL--------CVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKF
        M ++   +L R KK+  KL + L L        C  RR + +   +   +DR  GL SFLEDE      SVR L+R    SY   +DDVDKR++IFI  F
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRL--------CVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKF

Query:  LRQLRLERQISLQLRYCRVNSSETE
         RQL LERQ+SL+LRYCR  S +T+
Subjt:  LRQLRLERQISLQLRYCRVNSSETE

A0A1R3J730 Uncharacterized protein4.4e-1244.8Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRL--------CVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKF
        M ++   +L R KK+  KL + L L        C  RR + R   +   +DR  GL SFLEDE      SVR L+R    SY   +DDVDKR++IFI  F
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRL--------CVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKF

Query:  LRQLRLERQISLQLRYCRVNSSETE
         RQL LERQ+SL+LRYCR  S +T+
Subjt:  LRQLRLERQISLQLRYCRVNSSETE

A0A5D3CHZ5 Uncharacterized protein3.2e-3164.8Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDE-RIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLE
        MA+KKSP+  RLKK+ IKLTA +RLC+  R+ S+RL SF SDDR  G+R  LED+ RI EN   RKLERASS+ Y  +E+DVD+R++IFI+ F RQLRLE
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDE-RIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLE

Query:  RQISLQLRYCRVNSSETESEEKSPP
        RQISLQLRY RVNS ETE E+ SPP
Subjt:  RQISLQLRYCRVNSSETESEEKSPP

A0A6J1CW64 uncharacterized protein LOC1110147801.1e-3671.54Show/hide
Query:  MAQKKSPLLFRLKKSAIKLTAFLR----LCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQL
        MA+KKSPL+ RLKK+  K+TA LR    LC+ARR+ S RLRSF   DRT GLRSFLEDE I EN S+R+LERASS  Y N EDDVDKRSQIFID FLR+L
Subjt:  MAQKKSPLLFRLKKSAIKLTAFLR----LCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQL

Query:  RLERQISLQLRYCRVNSSETESEEKSPPYP
        RLERQISLQLRY R+NSS TE EE+SPP P
Subjt:  RLERQISLQLRYCRVNSSETESEEKSPPYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein2.3e-0537.5Show/hide
Query:  DDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLERQISLQLRYCRVNS
        +DR     +F E+E      S   L R  S    + ++D+D ++++FI  F RQL++ERQISL+L+YC+ N+
Subjt:  DDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLERQISLQLRYCRVNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAGAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGTCCGCGATAAAACTCACTGCGTTCCTCCGCCTCTGCGTCGCTCGTCGACAAAATTCACGACGGCTGCG
ATCATTCGGTTCCGACGATCGGACGGCAGGGCTACGGAGTTTCCTAGAAGATGAGAGAATAGTTGAGAATCGTTCCGTCAGAAAGCTTGAGCGTGCTTCGAGTGCAAGCT
ATGTAAATTTTGAAGACGATGTCGATAAGCGATCTCAGATTTTTATCGATAAATTTCTCCGTCAATTGAGGTTAGAACGACAAATTTCTTTGCAATTAAGATACTGTAGA
GTCAATAGCTCTGAAACGGAATCTGAAGAGAAATCGCCGCCGTATCCGTCGATTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAGAAGAAATCGCCATTGCTATTCCGCCTGAAGAAGTCCGCGATAAAACTCACTGCGTTCCTCCGCCTCTGCGTCGCTCGTCGACAAAATTCACGACGGCTGCG
ATCATTCGGTTCCGACGATCGGACGGCAGGGCTACGGAGTTTCCTAGAAGATGAGAGAATAGTTGAGAATCGTTCCGTCAGAAAGCTTGAGCGTGCTTCGAGTGCAAGCT
ATGTAAATTTTGAAGACGATGTCGATAAGCGATCTCAGATTTTTATCGATAAATTTCTCCGTCAATTGAGGTTAGAACGACAAATTTCTTTGCAATTAAGATACTGTAGA
GTCAATAGCTCTGAAACGGAATCTGAAGAGAAATCGCCGCCGTATCCGTCGATTCGATGA
Protein sequenceShow/hide protein sequence
MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLRSFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLERQISLQLRYCR
VNSSETESEEKSPPYPSIR