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Carg16290 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16290
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionconserved peptide upstream open reading frame 25
Genome locationCarg_Chr06:3026574..3027881
RNA-Seq ExpressionCarg16290
SyntenyCarg16290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7829149.1 uncharacterized protein G2W53_020313 [Senna tora]4.1e-0873.17Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME A FW+N +++++ SFQEVLDWRF VLGDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
KAG2676796.1 hypothetical protein I3760_12G069100 [Carya illinoinensis]7.0e-0873.17Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME   FW+  ++ +V SFQEVLDWRFLVLGDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
KAG7028229.1 hypothetical protein SDJN02_09410, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-45100Show/hide
Query:  MAKGHWIAGKWHQPADHWVEIREQIRNRFAGRRRAFREALDPNSSHMELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        MAKGHWIAGKWHQPADHWVEIREQIRNRFAGRRRAFREALDPNSSHMELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
Subjt:  MAKGHWIAGKWHQPADHWVEIREQIRNRFAGRRRAFREALDPNSSHMELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
XP_008448598.1 PREDICTED: uncharacterized protein LOC103490726 [Cucumis melo]7.2e-1392.68Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME AS WTNSF+HQVCSFQEVLDWRFLVLGDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
XP_011028056.1 PREDICTED: uncharacterized protein LOC105128195 [Populus euphratica]3.3e-1080.49Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME A FW+N F+H+V SFQEVLDWRFL+LGDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
TrEMBL top hitse value%identityAlignment
A0A0D2PZL6 Uncharacterized protein3.7e-0758Show/hide
Query:  EALDPNSSHMELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        E     +++ME   FW+N +  +V  FQEVLDWRFL  GDFLLVSFVNCT
Subjt:  EALDPNSSHMELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
A0A1S3BKY3 uncharacterized protein LOC1034907263.5e-1392.68Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME AS WTNSF+HQVCSFQEVLDWRFLVLGDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
A0A1U8MUE2 uncharacterized protein LOC1079385786.4e-0765.85Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME   FW+N +  ++ SFQEVLDWRF++ GDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
A0A6P4LMT5 uncharacterized protein LOC1084534056.4e-0765.85Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME   FW+N +  ++ SFQEVLDWRF++ GDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
A0A7J9BIK1 Uncharacterized protein6.4e-0765.85Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME   FW+N +  ++ SFQEVLDWRF++ GDFLLVSFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19112.1 conserved peptide upstream open reading frame 251.3e-0756.1Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME    W + + +++ SFQE LDWRFLV  DFL+ SFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
AT5G45428.1 conserved peptide upstream open reading frame 246.9e-0653.66Show/hide
Query:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT
        ME     +  ++++V S QE LDWRFLV  DFL+ SFVNCT
Subjt:  MELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGGGCACTGGATAGCTGGCAAGTGGCACCAACCAGCTGATCATTGGGTCGAAATCCGAGAGCAGATTAGAAACCGATTTGCGGGAAGAAGAAGAGCGTTTAG
GGAAGCTCTGGATCCCAATTCCTCCCATATGGAGCTTGCTTCTTTTTGGACAAATTCCTTCCGGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGACTGGCGTTTCCTTG
TTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAGGGCACTGGATAGCTGGCAAGTGGCACCAACCAGCTGATCATTGGGTCGAAATCCGAGAGCAGATTAGAAACCGATTTGCGGGAAGAAGAAGAGCGTTTAG
GGAAGCTCTGGATCCCAATTCCTCCCATATGGAGCTTGCTTCTTTTTGGACAAATTCCTTCCGGCATCAAGTTTGTTCTTTCCAGGAAGTGCTTGACTGGCGTTTCCTTG
TTCTTGGAGATTTTCTTTTGGTTTCCTTTGTCAATTGCACTTAG
Protein sequenceShow/hide protein sequence
MAKGHWIAGKWHQPADHWVEIREQIRNRFAGRRRAFREALDPNSSHMELASFWTNSFRHQVCSFQEVLDWRFLVLGDFLLVSFVNCT