; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16300 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16300
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMFS domain-containing protein
Genome locationCarg_Chr19:5656586..5657246
RNA-Seq ExpressionCarg16300
SyntenyCarg16300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571891.1 putative sphingolipid transporter spinster-like 3, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2270.45Show/hide
Query:  FSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        F FG     + + +  F     LL +    SKASFYRYVH CN HLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
Subjt:  FSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

KAG7011576.1 putative sphingolipid transporter spinster-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-51100Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEVSCLE
        MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEVSCLE
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEVSCLE

Query:  VKSILYVFS
        VKSILYVFS
Subjt:  VKSILYVFS

RVX23651.1 putative sphingolipid transporter spinster-like 3 [Vitis vinifera]2.0e-1251.58Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        +Y F+  FS GELL+F T V Y+ + S    L  +T        + H  N+  P+N+VCLHCV PSLRPLSM+MST+AI IFGDVPSS LVG+++
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

XP_022953038.1 probable sphingolipid transporter spinster homolog 2 [Cucurbita moschata]5.8e-1252.63Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        MY FLVFFS GELLLF T                                   P+NFVCLHCVTP+LRPLSM+MST+AI IFGDVPSS LVGV+E
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

XP_023511602.1 probable sphingolipid transporter spinster homolog 2 [Cucurbita pepo subsp. pepo]2.6e-1253.68Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        MY FLVFFS GELLLF T                                   P+NFVCLHCVTPSLRPLSM+MST+AI IFGDVPSS LVGV+E
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

TrEMBL top hitse value%identityAlignment
A0A438KR33 Putative sphingolipid transporter spinster-like 39.7e-1351.58Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        +Y F+  FS GELL+F T V Y+ + S    L  +T        + H  N+  P+N+VCLHCV PSLRPLSM+MST+AI IFGDVPSS LVG+++
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

A0A6J1GM96 probable sphingolipid transporter spinster homolog 22.8e-1252.63Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        MY FLVFFS GELLLF T                                   P+NFVCLHCVTP+LRPLSM+MST+AI IFGDVPSS LVGV+E
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

A0A6J1I4D9 probable sphingolipid transporter spinster homolog 26.3e-1252.63Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        MY FLVFFS GELLLF T                                   P+NFVCLHCV PSLRPLSM+MST+AI IFGDVPSS LVGV+E
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

A0A6J1I757 probable sphingolipid transporter spinster homolog 26.3e-1252.63Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        MY FLVFFS GELLLF T                                   P+NFVCLHCV PSLRPLSM+MST+AI IFGDVPSS LVGV+E
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

A0A6J1I9V4 probable sphingolipid transporter spinster homolog 26.3e-1252.63Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        MY FLVFFS GELLLF T                                   P+NFVCLHCV PSLRPLSM+MST+AI IFGDVPSS LVGV+E
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

SwissProt top hitse value%identityAlignment
F4IKF6 Probable sphingolipid transporter spinster homolog 31.0e-1143.16Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        +Y F+  F+ GELL+F T                                   P+N+VCLHCV PSLRPLSM++ST+AI IFGDVPSS LVG+V+
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

Q6NMN6 Probable sphingolipid transporter spinster homolog 16.9e-0835.96Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE-----
        MY F+  F+ GE+L+F                                     P+NFVCLHCV P+LRPLSM+ ST+ I I GDVPSS L G ++     
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE-----

Query:  --VSCLEVKSILYV
           S L + SIL++
Subjt:  --VSCLEVKSILYV

Q9FLG8 Probable sphingolipid transporter spinster homolog 23.3e-1040.91Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE--VSC
        MY FL  F+ GELL+F T                                   P+NF+ LHCV PSLRPL+M+MST++I IFGDVPSS LVGV++  V+ 
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE--VSC

Query:  LEVKSILYVF
          V S++  F
Subjt:  LEVKSILYVF

Arabidopsis top hitse value%identityAlignment
AT2G22730.1 Major facilitator superfamily protein7.4e-1343.16Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        +Y F+  F+ GELL+F T                                   P+N+VCLHCV PSLRPLSM++ST+AI IFGDVPSS LVG+V+
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE

AT5G64500.1 Major facilitator superfamily protein2.4e-1140.91Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE--VSC
        MY FL  F+ GELL+F T                                   P+NF+ LHCV PSLRPL+M+MST++I IFGDVPSS LVGV++  V+ 
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE--VSC

Query:  LEVKSILYVF
          V S++  F
Subjt:  LEVKSILYVF

AT5G65687.1 Major facilitator superfamily protein4.9e-0935.96Show/hide
Query:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE-----
        MY F+  F+ GE+L+F                                     P+NFVCLHCV P+LRPLSM+ ST+ I I GDVPSS L G ++     
Subjt:  MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE-----

Query:  --VSCLEVKSILYV
           S L + SIL++
Subjt:  --VSCLEVKSILYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGACTTCCTAGTTTTTTTCTCATTTGGCGAGCTGCTACTGTTTGACACACACGTATACTATTCTTTTATACAAAGTTATAGCCTACTTCTATCTGACGTGACATT
ATCTAAGGCCTCTTTCTATCGCTATGTCCACAGTTGCAATTCACATCTCCCGATAAACTTCGTGTGCCTACATTGCGTGACGCCTAGTCTAAGGCCGCTTTCTATGTCTA
TGTCCACAATTGCAATTCAGATTTTTGGAGATGTGCCATCTTCGAATCTTGTTGGAGTTGTCGAAGTTAGTTGTTTAGAAGTTAAGTCTATTCTATATGTTTTTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGACTTCCTAGTTTTTTTCTCATTTGGCGAGCTGCTACTGTTTGACACACACGTATACTATTCTTTTATACAAAGTTATAGCCTACTTCTATCTGACGTGACATT
ATCTAAGGCCTCTTTCTATCGCTATGTCCACAGTTGCAATTCACATCTCCCGATAAACTTCGTGTGCCTACATTGCGTGACGCCTAGTCTAAGGCCGCTTTCTATGTCTA
TGTCCACAATTGCAATTCAGATTTTTGGAGATGTGCCATCTTCGAATCTTGTTGGAGTTGTCGAAGTTAGTTGTTTAGAAGTTAAGTCTATTCTATATGTTTTTAGTTAA
Protein sequenceShow/hide protein sequence
MYDFLVFFSFGELLLFDTHVYYSFIQSYSLLLSDVTLSKASFYRYVHSCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEVSCLEVKSILYVFS