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Carg16322 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16322
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationCarg_Chr19:5915815..5916237
RNA-Seq ExpressionCarg16322
SyntenyCarg16322
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571915.1 hypothetical protein SDJN03_28643, partial [Cucurbita argyrosperma subsp. sororia]4.6e-3088.1Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG-----GYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
        MSYYNQPPPPVGVP     PPQGYPPKDAYPPQGYPPQG     GYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG-----GYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG

KAG7011598.1 hypothetical protein SDJN02_26504, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-38100Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEGW
        MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEGW
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEGW

XP_022952198.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]8.6e-37100Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
        MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG

XP_022972438.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]2.4e-3192.41Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
        MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPP    PAYGPPQPQH NQKKEVGFVEG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG

XP_023553865.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]4.3e-3698.73Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
        MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG

TrEMBL top hitse value%identityAlignment
A0A0A0K2W8 Uncharacterized protein4.9e-3091.25Show/hide
Query:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY-PPPAYGPAYG-PPQPQHSNQKKEVGFVEG
        SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY PPP YGPAYG  P PQH NQKKEVGFVEG
Subjt:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY-PPPAYGPAYG-PPQPQHSNQKKEVGFVEG

A0A1S3BZZ2 cysteine-rich and transmembrane domain-containing protein A-like1.6e-2887.65Show/hide
Query:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP-PAYGPAYG--PPQPQHSNQKKEVGFVEG
        SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP P YGPAYG  PP    +NQKKEVGFVEG
Subjt:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP-PAYGPAYG--PPQPQHSNQKKEVGFVEG

A0A5A7SME1 Cysteine-rich and transmembrane domain-containing protein A-like8.4e-3087.8Show/hide
Query:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP-PAYGPAYG--PPQPQHSNQKKEVGFVEGW
        SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP P YGPAYG  PP    +NQKKEVGFVEGW
Subjt:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP-PAYGPAYG--PPQPQHSNQKKEVGFVEGW

A0A6J1GJV9 cysteine-rich and transmembrane domain-containing protein WIH2-like4.2e-37100Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
        MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG

A0A6J1I9Y5 cysteine-rich and transmembrane domain-containing protein WIH2-like1.2e-3192.41Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
        MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPP    PAYGPPQPQH NQKKEVGFVEG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG

SwissProt top hitse value%identityAlignment
O16005 Rhodopsin1.3e-0869.84Show/hide
Query:  PPVGVPPPQ-GYPPQGYPPKDA---YPPQGY-PPQGGYPPA-GYPPQGYPPPAYGPAYG-PPQ
        PP G  PPQ GYPPQGYPP  A   YPPQGY PP  GYPPA GYPPQGYPPP   P  G PPQ
Subjt:  PPVGVPPPQ-GYPPQGYPPKDA---YPPQGY-PPQGGYPPA-GYPPQGYPPPAYGPAYG-PPQ

P09241 Rhodopsin2.9e-1169.35Show/hide
Query:  YNQPPPPVGVPPPQGYPPQG-YPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQ
        Y  PPPP G  PPQGYPPQG YPP   YPPQGYPPQ GYPP GYPPQG PP    P   PPQ
Subjt:  YNQPPPPVGVPPPQGYPPQG-YPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQ

P24639 Annexin A72.3e-0867.8Show/hide
Query:  PPPVGVPPPQGYPP-QGYPPKDAYPP-QGYPPQGGYPP-AGYPPQGYPPPAYGPAYGPP
        PP  G PP QGYPP QGYPP+  YPP QGYPPQ GYPP  GYPPQGYPP    P  G P
Subjt:  PPPVGVPPPQGYPP-QGYPPKDAYPP-QGYPPQGGYPP-AGYPPQGYPPPAYGPAYGPP

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B4.2e-1053.49Show/hide
Query:  NQPPPPVGVPPPQGYPPQGYPPKDAYPP-------QGYPPQGGYPPAGYPPQGYPPPAYG----PAYGPPQPQHSNQKKEVGFVEG
        +Q PP VGVPP   YP +G PPKDAYPP       QGYPP  GYP  GYPPQGYPP  Y     P  G P  Q   QK   G +EG
Subjt:  NQPPPPVGVPPPQGYPPQGYPPKDAYPP-------QGYPPQGGYPPAGYPPQGYPPPAYG----PAYGPPQPQHSNQKKEVGFVEG

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH29.0e-2168.97Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYP----PPAYGPAYGPPQPQHSNQKKEVGFVEG
        MS YNQ  PPVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP    PP Y P Y PP PQH  Q+   GF+EG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYP----PPAYGPAYGPPQPQHSNQKKEVGFVEG

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein6.4e-2268.97Show/hide
Query:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYP----PPAYGPAYGPPQPQHSNQKKEVGFVEG
        MS YNQ  PPVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP    PP Y P Y PP PQH  Q+   GF+EG
Subjt:  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYP----PPAYGPAYGPPQPQHSNQKKEVGFVEG

AT3G49845.1 unknown protein2.5e-1045.79Show/hide
Query:  YNQPPPPVGVPPPQGYPP-QGYPPKDAYPPQGYP----PQGGYPPAGYPP-----------QGYPPPAYG-------PAYGPPQPQH--------SNQKK
        Y  P  PV  PPPQGYPP +GYPP    PP GYP    PQ GYPPAGYPP           QGYPPP Y        P  GPP P +         ++K 
Subjt:  YNQPPPPVGVPPPQGYPP-QGYPPKDAYPPQGYP----PQGGYPPAGYPP-----------QGYPPPAYG-------PAYGPPQPQH--------SNQKK

Query:  EVGFVEG
          GF+EG
Subjt:  EVGFVEG

AT5G17650.1 glycine/proline-rich protein4.7e-0956.72Show/hide
Query:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHS
        S Y  PPP    PPP GYPP  YPP   YPP GYPP  GYPPAGYP  GY      P++G P+P HS
Subjt:  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHS

AT5G45350.1 proline-rich family protein1.4e-0858.06Show/hide
Query:  GYPPQGYPPKDAYPPQGYPPQGGYPPAG-YPPQGYPPPAYGPAYG--PPQPQHSNQKKEVGF
        GYPP GYPP  AYPP GYP QG  PP G YPP GYPP AY PA G  PP P +       G+
Subjt:  GYPPQGYPPKDAYPPQGYPPQGGYPPAG-YPPQGYPPPAYGPAYG--PPQPQHSNQKKEVGF

AT5G67600.1 unknown protein2.8e-0955Show/hide
Query:  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP----AGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG
        Y+Q   PVG P     PPQGYPPKD YPP GYPP  GYPP     GYP QGYPPP Y  A     PQ   QK+  G +EG
Subjt:  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP----AGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACC
GCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCATATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAG
TTGGATTCGTCGAAGGCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACC
GCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCATATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAG
TTGGATTCGTCGAAGGCTGGTAA
Protein sequenceShow/hide protein sequence
MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEGW