; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16330 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16330
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA polymerase kappa
Genome locationCarg_Chr19:5954437..5964290
RNA-Seq ExpressionCarg16330
SyntenyCarg16330
Gene Ontology termsGO:0042276 - error-prone translesion synthesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR017961 - DNA polymerase, Y-family, little finger domain
IPR036775 - DNA polymerase, Y-family, little finger domain superfamily
IPR041298 - DNA polymerase eta, ubiquitin-binding zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571919.1 DNA polymerase kappa, partial [Cucurbita argyrosperma subsp. sororia]3.6e-17199.37Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDR CTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGT+CASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

KAG7011605.1 DNA polymerase kappa [Cucurbita argyrosperma subsp. argyrosperma]4.2e-172100Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

XP_022953078.1 DNA polymerase kappa isoform X1 [Cucurbita moschata]2.0e-16998.1Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLK+ASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCTSSPDPNVHS MDESEIDVFINGTETHHQDSSHPR+GNNLSNMDDR CTSSND EKSEKFKNLSSNVST QVDNLNGFVPRVSGTACASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

XP_022972431.1 DNA polymerase kappa isoform X1 [Cucurbita maxima]9.2e-16796.51Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLK+ASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCT +PDPNVH  MDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDR CTSSNDAEKSEKFKNLSSNVST QVDNLNGFVPR+SGTACASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQN+NVEARTNVEARSPDN+GQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQL SQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

XP_022972432.1 DNA polymerase kappa isoform X2 [Cucurbita maxima]9.2e-16796.51Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLK+ASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCT +PDPNVH  MDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDR CTSSNDAEKSEKFKNLSSNVST QVDNLNGFVPR+SGTACASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQN+NVEARTNVEARSPDN+GQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQL SQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

TrEMBL top hitse value%identityAlignment
A0A6J1D516 DNA polymerase kappa3.0e-12375Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDM+KEGLSGRTLT+KLK+ASFEVRTRAVTLQ+YICSSSDILQHASKLLKAELPISLRLIGLRISHFNED AI  SDP Q  ITRFI SGDATRK++
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGF----------VPRVSGTA
        GDCC+ +PD + H  M+++EIDVFINGTETHHQD   PRIGNN  NMDD  CT  ND E  EKFKNLSSNVST QVDNLN            V      A
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGF----------VPRVSGTA

Query:  CASSPRNLEGNQNNNVEARTNV-EARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQK
        CAS P NLEG  +NNV ART+V E RSPDN+GQ  WIDDYKC ICGAE+P SF+DERQEH+DFHIAEKLQEEESGIRSRTL P +R  DK QL+SQRKQK
Subjt:  CASSPRNLEGNQNNNVEARTNV-EARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQK

Query:  RQKSTPKKEVKHIPIDLFFVKNNQ
        +QKSTPKKEVKHIPIDLFFVK+NQ
Subjt:  RQKSTPKKEVKHIPIDLFFVKNNQ

A0A6J1D6E2 DNA polymerase kappa3.0e-12375Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDM+KEGLSGRTLT+KLK+ASFEVRTRAVTLQ+YICSSSDILQHASKLLKAELPISLRLIGLRISHFNED AI  SDP Q  ITRFI SGDATRK++
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGF----------VPRVSGTA
        GDCC+ +PD + H  M+++EIDVFINGTETHHQD   PRIGNN  NMDD  CT  ND E  EKFKNLSSNVST QVDNLN            V      A
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGF----------VPRVSGTA

Query:  CASSPRNLEGNQNNNVEARTNV-EARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQK
        CAS P NLEG  +NNV ART+V E RSPDN+GQ  WIDDYKC ICGAE+P SF+DERQEH+DFHIAEKLQEEESGIRSRTL P +R  DK QL+SQRKQK
Subjt:  CASSPRNLEGNQNNNVEARTNV-EARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQK

Query:  RQKSTPKKEVKHIPIDLFFVKNNQ
        +QKSTPKKEVKHIPIDLFFVK+NQ
Subjt:  RQKSTPKKEVKHIPIDLFFVKNNQ

A0A6J1GMD5 DNA polymerase kappa9.5e-17098.1Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLK+ASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCTSSPDPNVHS MDESEIDVFINGTETHHQDSSHPR+GNNLSNMDDR CTSSND EKSEKFKNLSSNVST QVDNLNGFVPRVSGTACASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

A0A6J1I4S8 DNA polymerase kappa4.4e-16796.51Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLK+ASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCT +PDPNVH  MDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDR CTSSNDAEKSEKFKNLSSNVST QVDNLNGFVPR+SGTACASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQN+NVEARTNVEARSPDN+GQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQL SQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

A0A6J1I5Y7 DNA polymerase kappa4.4e-16796.51Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
        MLSMDMEKEGLSGRTLTLKLK+ASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNM

Query:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG
        GDCCT +PDPNVH  MDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDR CTSSNDAEKSEKFKNLSSNVST QVDNLNGFVPR+SGTACASSPRNLEG
Subjt:  GDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEG

Query:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK
        NQN+NVEARTNVEARSPDN+GQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQL SQRKQKRQKSTPKKEVK
Subjt:  NQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVK

Query:  HIPIDLFFVKNNQKF
        HIPIDLFFVKNNQKF
Subjt:  HIPIDLFFVKNNQKF

SwissProt top hitse value%identityAlignment
O74944 DNA polymerase kappa5.5e-0535.38Show/hide
Query:  LSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLR
        +S +++K GL   ++ +K K++ F+V T+  ++ Q+I S SD+L+ A +LL+   P+++RL+G+R
Subjt:  LSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLR

P34409 DNA polymerase kappa1.4e-0542.11Show/hide
Query:  MLSMDMEKEGL-SGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISH--FNED
        ML  D+ K G+  G+T+TLKLK +SF+V TR++T    + S  DI + + +LL+ E    +RL+G+R+S   F ED
Subjt:  MLSMDMEKEGL-SGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISH--FNED

Q6JDV7 DNA polymerase kappa1.4e-4841.59Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATR--K
        MLS DM+KEGL+ RTLTLKLK+ASFE+R+RAV+LQ+Y CSS DIL+HA+KLLKAELP+S+RLIGLR+S F E+  I  SDP+Q  IT+FI   D++R  +
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATR--K

Query:  NMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNL
        ++ D  +   D N + L ++   +V     ET              S +D  K   + +  K E+           ++  L G         C     + 
Subjt:  NMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNL

Query:  EGNQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKE
          + +N  EA +      P       WID YKC +CG E+P SF++ERQEH DFH+A++LQ EE+G  S T    RR   K ++ S  K K+QK   K  
Subjt:  EGNQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKE

Query:  VKHIPIDLFFVKNNQ
         KHIPI  FF K+NQ
Subjt:  VKHIPIDLFFVKNNQ

Q9QUG2 DNA polymerase kappa2.8e-0928.72Show/hide
Query:  LSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAEL------PISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDA
        L+ D++KEGL GRT+T+KLK+ +FEV+TRA T+   I ++ +I   A +LL+ E+      P+ LRL+G+R+S F+ +         Q  I  F+ +G+ 
Subjt:  LSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAEL------PISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDA

Query:  TRKNMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSND-----AEKSEKFKNLSSNVSTAQVDN
           + GD    +    +   ++ S    F +   +        RI N     D  +C ++        E S+  K LS +  T++  N
Subjt:  TRKNMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSND-----AEKSEKFKNLSSNVSTAQVDN

Q9UBT6 DNA polymerase kappa1.1e-0830.77Show/hide
Query:  LSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAEL------PISLRLIGLRISHF-NEDGAIAGSDPAQTPITRFITSGD
        L+ D++KE L GRT+T+KLK+ +FEV+TRA T+   + ++ +I   A +LLK E+      P+ LRL+G+RIS F NE+         Q  I  F+ +G+
Subjt:  LSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAEL------PISLRLIGLRISHF-NEDGAIAGSDPAQTPITRFITSGD

Query:  ATRKNMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDS--SHPRIGNNLSNMDDRKCTSSN--DAEKSEKFKNLSSNVS
                 CT          +++++ D F+   E  H+ S     R     S+ D  KC + N    + S+ F+ L   ++
Subjt:  ATRKNMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDS--SHPRIGNNLSNMDDRKCTSSN--DAEKSEKFKNLSSNVS

Arabidopsis top hitse value%identityAlignment
AT1G49980.1 DNA/RNA polymerases superfamily protein9.8e-5041.59Show/hide
Query:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATR--K
        MLS DM+KEGL+ RTLTLKLK+ASFE+R+RAV+LQ+Y CSS DIL+HA+KLLKAELP+S+RLIGLR+S F E+  I  SDP+Q  IT+FI   D++R  +
Subjt:  MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATR--K

Query:  NMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNL
        ++ D  +   D N + L ++   +V     ET              S +D  K   + +  K E+           ++  L G         C     + 
Subjt:  NMGDCCTSSPDPNVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNL

Query:  EGNQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKE
          + +N  EA +      P       WID YKC +CG E+P SF++ERQEH DFH+A++LQ EE+G  S T    RR   K ++ S  K K+QK   K  
Subjt:  EGNQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKE

Query:  VKHIPIDLFFVKNNQ
         KHIPI  FF K+NQ
Subjt:  VKHIPIDLFFVKNNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTCTATGGACATGGAAAAAGAAGGTCTGAGCGGGCGAACACTGACGCTTAAACTAAAATCTGCATCCTTTGAGGTTAGAACCAGAGCCGTAACTTTGCAACAATA
CATTTGTTCTAGCAGTGACATCTTGCAACATGCATCAAAGCTGCTAAAGGCTGAACTGCCCATTTCTTTGAGACTAATCGGGTTGCGGATATCTCACTTCAATGAAGATG
GAGCCATTGCTGGGTCTGATCCGGCTCAAACACCTATTACTCGATTTATTACATCAGGAGATGCTACTAGAAAGAATATGGGTGATTGTTGCACCTCAAGTCCTGATCCT
AATGTTCATAGCCTCATGGATGAATCTGAAATTGATGTATTTATCAATGGCACTGAAACACACCATCAAGATAGTAGTCATCCAAGAATTGGCAATAATCTCTCGAATAT
GGATGACCGAAAGTGTACATCCAGCAATGACGCTGAGAAGTCGGAGAAATTTAAGAATCTTTCGAGCAACGTCAGTACTGCTCAGGTGGACAATTTGAATGGCTTTGTCC
CTCGAGTATCGGGCACAGCATGTGCTTCTTCCCCTAGAAACCTCGAAGGCAATCAGAATAATAATGTCGAAGCCAGAACTAACGTCGAGGCAAGATCACCAGATAATAAT
GGACAGAATTTGTGGATCGATGACTACAAATGTGCAATCTGTGGTGCCGAAGTACCAGAGAGTTTCATTGATGAAAGACAAGAGCACATGGATTTTCACATTGCGGAAAA
ACTCCAGGAAGAGGAATCTGGCATTCGTTCAAGAACCCTTACGCCAATCCGAAGGACTCCTGACAAGAACCAACTGGCAAGTCAAAGAAAGCAGAAAAGGCAAAAGTCAA
CTCCAAAGAAAGAGGTCAAACACATTCCAATTGACTTATTCTTTGTGAAGAATAATCAGAAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
AACTTCGGCTGAAAGCTTTGGAGACCTGGAGAAAAATGGAAAGAAAGCAGATTGACGGCGATGGCGATCGTCCGTGGCAGTCTTACAACACTGTCTACACCAATGCAAAA
GCCGGTATGGAAGGTGTTGACAAGGAGAAAGTACAAAGAATTGTCTATGAAATGAGTAAAGGGTCGAAATATTTTGAAAATGAGGAGCGGAAAGAGGCCATCATCAGAGA
AAAGATTGAGAAGATGCGAGCTAGATGTATGCAGCTTAATGCAACGGATCTTTCTCAGTATCAAAAGGTTGCAGATAAAAGAATTTTGGAGCTGGAAAGTACACGTGACC
TGTCAAGGATATGGTTGCATGTAGATATGGATGCTTTCTATGCCGCTGTTGAAACTTTAAGCAATCCTTTATTAGAGGGCAAGCCAATGGCTGTTGGTAGCATGTCGATG
ATTTCTACTGCTAACTATGAGGCTCGAAAATATGGAGTTCGTGCTGCTATGCCTGGTTTTATTGCACGTAGATTATGTCCAGAGTTAATTTTTGTTCCCACAGATTTCAA
GAAGTATAATTATTACAGTGATTTAGCTAGAAAAGTATTCCGTAGGTATGATCCCAACTTCTTGGCTGCTAGTCTGGATGAAGCATACCTCGATATAACTGAAGTCTGCA
AAGATAGAGGCCTTACTAGTGAACAAATTGCTATGGATCTCAGAACCAGTATTTATGAAGAAACTGGTCTTACGTGTAGTGCTGGGGTTGCTGCCAACCGGCTACTTGCC
AAGGTCTGCTCTGATATTAACAAACCAAATGGACAGTTCATTTTGCCAAATGACCGAAGAGCTATCGTAACATTCGTATCATCACTACCCATAAGAAAGGTATGTGGTCA
TTACTTTTACGTTGAAACAGAATTCACAACGTTATTCTAGATGTTATTAGAATATGAAGTAATATAGATGAATAAGAGTTCTCTTCCTGTAGTCCTATTTCATGAATGAA
ATGAATCGGCGAAGTTATTATTTCAGATTGGTGGCATCGGAAAGGTCACTGAACATATCTTAAAGGACGGTTTGGGGGAGAGCATCAGTAACGAAAGAACGTTTGCAGCC
ACTGCTGAAGAAAAATTAATTTTCCAGAAACTTGCTGACCTTGCAGAGATGCTGTCTATGGACATGGAAAAAGAAGGTCTGAGCGGGCGAACACTGACGCTTAAACTAAA
ATCTGCATCCTTTGAGGTTAGAACCAGAGCCGTAACTTTGCAACAATACATTTGTTCTAGCAGTGACATCTTGCAACATGCATCAAAGCTGCTAAAGGCTGAACTGCCCA
TTTCTTTGAGACTAATCGGGTTGCGGATATCTCACTTCAATGAAGATGGAGCCATTGCTGGGTCTGATCCGGCTCAAACACCTATTACTCGATTTATTACATCAGGAGAT
GCTACTAGAAAGAATATGGGTGATTGTTGCACCTCAAGTCCTGATCCTAATGTTCATAGCCTCATGGATGAATCTGAAATTGATGTATTTATCAATGGCACTGAAACACA
CCATCAAGATAGTAGTCATCCAAGAATTGGCAATAATCTCTCGAATATGGATGACCGAAAGTGTACATCCAGCAATGACGCTGAGAAGTCGGAGAAATTTAAGAATCTTT
CGAGCAACGTCAGTACTGCTCAGGTGGACAATTTGAATGGCTTTGTCCCTCGAGTATCGGGCACAGCATGTGCTTCTTCCCCTAGAAACCTCGAAGGCAATCAGAATAAT
AATGTCGAAGCCAGAACTAACGTCGAGGCAAGATCACCAGATAATAATGGACAGAATTTGTGGATCGATGACTACAAATGTGCAATCTGTGGTGCCGAAGTACCAGAGAG
TTTCATTGATGAAAGACAAGAGCACATGGATTTTCACATTGCGGAAAAACTCCAGGAAGAGGAATCTGGCATTCGTTCAAGAACCCTTACGCCAATCCGAAGGACTCCTG
ACAAGAACCAACTGGCAAGTCAAAGAAAGCAGAAAAGGCAAAAGTCAACTCCAAAGAAAGAGGTCAAACACATTCCAATTGACTTATTCTTTGTGAAGAATAATCAGAAG
TTTTAGTATTGGTACGTGTTGTGTTTGTATATATCTGTTCATATCTTTCGGGATATTACCCATTGTTTTTTTTTTTAGGAGAGTTCATCGTTTCATTCTTCTCATGCAGC
GTCATAAGTTTCTACATTAATGTATAGTAAGTATAATGATAAATCTCATTCTTTTTATGGATTGGGACTTGGCGTCTTGGTTTCTTGGTAAAACACTCGTATTTAGATTT
TGTCCGGGAACTCATTTGGTTCTTTTTTTCATGCGAGA
Protein sequenceShow/hide protein sequence
MLSMDMEKEGLSGRTLTLKLKSASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNMGDCCTSSPDP
NVHSLMDESEIDVFINGTETHHQDSSHPRIGNNLSNMDDRKCTSSNDAEKSEKFKNLSSNVSTAQVDNLNGFVPRVSGTACASSPRNLEGNQNNNVEARTNVEARSPDNN
GQNLWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPKKEVKHIPIDLFFVKNNQKF