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Carg16333 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16333
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr19:5976819..5977222
RNA-Seq ExpressionCarg16333
SyntenyCarg16333
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0010374 - stomatal complex development (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN82161.1 hypothetical protein VITISV_035506 [Vitis vinifera]2.1e-1750.89Show/hide
Query:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV
        MEL++K  L + F LT+L  S LV  R L  +PSPA    GE  G  K +   G +  R+GSFP  C SKCNQC PC  V+V+VR     EN  EYYPQV
Subjt:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV

Query:  WRCMCHHNIFFP
        WRCMCH  +F P
Subjt:  WRCMCHHNIFFP

KAB1208372.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Morella rubra]1.9e-1858.49Show/hide
Query:  LVFALTLLSF--SCLVRSRTLLTAPSPAPEGEGNGGH------KGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCH
        L FAL L +F   CLV  R L TAPSPAPE     GH      KG    K MR GSFP  C SKCNQC+PC  V+VSVR+M L ENN EYYPQVW+CMC 
Subjt:  LVFALTLLSF--SCLVRSRTLLTAPSPAPEGEGNGGH------KGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCH

Query:  HNIFFP
         N+F P
Subjt:  HNIFFP

KAE8645843.1 hypothetical protein Csa_017281 [Cucumis sativus]8.9e-2984.21Show/hide
Query:  PAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRS-MNLVE-NNIEYYPQVWRCMCHHNIFFP
        P PEGEG G HKGV  R+H RKGSFPG CDSKCN+CKPCKLVQVSVRS M+LVE NNIEYYPQVWRCMCHHNIFFP
Subjt:  PAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRS-MNLVE-NNIEYYPQVWRCMCHHNIFFP

KAG6571922.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.1e-55100Show/hide
Query:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCM
        MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCM
Subjt:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCM

Query:  CHHNIFFP
        CHHNIFFP
Subjt:  CHHNIFFP

KAG7011608.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-55100Show/hide
Query:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCM
        MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCM
Subjt:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCM

Query:  CHHNIFFP
        CHHNIFFP
Subjt:  CHHNIFFP

TrEMBL top hitse value%identityAlignment
A0A438GJP6 Putative beta-D-xylosidase 51.3e-1750.89Show/hide
Query:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV
        MEL++K  L + F LT+L  S LV  R L  +PSPA    GE  G  K +   G +  R+GSFP  C SKCNQC PC  V+V+VR     EN  EYYPQV
Subjt:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV

Query:  WRCMCHHNIFFP
        WRCMCH  +F P
Subjt:  WRCMCHHNIFFP

A0A4D6LSA9 Epidermal patterning factor-like protein6.4e-1746.02Show/hide
Query:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVV----GRK-HMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQ
        MEL  K    + F + LL+ +CL+ SR L T+PSPAPEG     ++  +    G+K + R GSFP  C +KCNQCKPC  V+V++++M   EN  +YYP 
Subjt:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVV----GRK-HMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQ

Query:  VWRCMCHHNIFFP
         W+CMC  NIF P
Subjt:  VWRCMCHHNIFFP

A0A6A1V6A3 Epidermal patterning factor-like protein9.0e-1958.49Show/hide
Query:  LVFALTLLSF--SCLVRSRTLLTAPSPAPEGEGNGGH------KGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCH
        L FAL L +F   CLV  R L TAPSPAPE     GH      KG    K MR GSFP  C SKCNQC+PC  V+VSVR+M L ENN EYYPQVW+CMC 
Subjt:  LVFALTLLSF--SCLVRSRTLLTAPSPAPEGEGNGGH------KGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCH

Query:  HNIFFP
         N+F P
Subjt:  HNIFFP

A5AHE5 Fn3_like domain-containing protein9.9e-1850.89Show/hide
Query:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV
        MEL++K  L + F LT+L  S LV  R L  +PSPA    GE  G  K +   G +  R+GSFP  C SKCNQC PC  V+V+VR     EN  EYYPQV
Subjt:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV

Query:  WRCMCHHNIFFP
        WRCMCH  +F P
Subjt:  WRCMCHHNIFFP

D7SXR0 Fn3_like domain-containing protein1.3e-1750.89Show/hide
Query:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV
        MEL++K  L + F LT+L  S LV  R L  +PSPA    GE  G  K +   G +  R+GSFP  C SKCNQC PC  V+V+VR     EN  EYYPQV
Subjt:  MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPA--PEGEGNGGHKGVV--GRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQV

Query:  WRCMCHHNIFFP
        WRCMCH  +F P
Subjt:  WRCMCHHNIFFP

SwissProt top hitse value%identityAlignment
Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 87.9e-0433.82Show/hide
Query:  NGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIE-YYPQVWRCMCHHNIFFP
        +G H      K    GS P  C +KC  CKPC      +R  +  +++ E YYP  W C C   +F P
Subjt:  NGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIE-YYPQVWRCMCHHNIFFP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.6e-0744.23Show/hide
Query:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP
        GS P  C SKC +C+PCK V V ++    +   +EYYP+ WRC C + +F P
Subjt:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 55.8e-0742.31Show/hide
Query:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP
        GS P  C  KC +C+PCK V V ++   ++   +EYYP+ WRC C + +F P
Subjt:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein5.6e-0533.82Show/hide
Query:  NGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIE-YYPQVWRCMCHHNIFFP
        +G H      K    GS P  C +KC  CKPC      +R  +  +++ E YYP  W C C   +F P
Subjt:  NGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIE-YYPQVWRCMCHHNIFFP

AT3G22820.1 allergen-related4.1e-0842.31Show/hide
Query:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP
        GS P  C  KC +C+PCK V V ++   ++   +EYYP+ WRC C + +F P
Subjt:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.9e-0844.23Show/hide
Query:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP
        GS P  C SKC +C+PCK V V ++    +   +EYYP+ WRC C + +F P
Subjt:  GSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAAAGATCAAAACCGCTCTCGCTCTCGTTTTCGCTCTCACATTGCTTAGCTTTTCTTGTCTCGTCCGCTCGAGAACTCTCTTGACTGCTCCATCACCTGCACC
TGAAGGAGAGGGAAATGGAGGCCATAAAGGTGTGGTTGGAAGGAAGCATATGAGGAAGGGCTCATTTCCGGGAGATTGTGATTCTAAGTGCAACCAATGCAAGCCGTGCA
AGCTTGTTCAAGTGTCAGTGAGATCCATGAACTTAGTTGAGAACAATATCGAGTACTATCCTCAAGTATGGAGGTGCATGTGTCATCACAACATATTTTTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTAAAGATCAAAACCGCTCTCGCTCTCGTTTTCGCTCTCACATTGCTTAGCTTTTCTTGTCTCGTCCGCTCGAGAACTCTCTTGACTGCTCCATCACCTGCACC
TGAAGGAGAGGGAAATGGAGGCCATAAAGGTGTGGTTGGAAGGAAGCATATGAGGAAGGGCTCATTTCCGGGAGATTGTGATTCTAAGTGCAACCAATGCAAGCCGTGCA
AGCTTGTTCAAGTGTCAGTGAGATCCATGAACTTAGTTGAGAACAATATCGAGTACTATCCTCAAGTATGGAGGTGCATGTGTCATCACAACATATTTTTTCCTTAA
Protein sequenceShow/hide protein sequence
MELKIKTALALVFALTLLSFSCLVRSRTLLTAPSPAPEGEGNGGHKGVVGRKHMRKGSFPGDCDSKCNQCKPCKLVQVSVRSMNLVENNIEYYPQVWRCMCHHNIFFP