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Carg16343 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16343
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMyb-like protein W isoform X1
Genome locationCarg_Chr19:6049357..6049602
RNA-Seq ExpressionCarg16343
SyntenyCarg16343
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571930.1 hypothetical protein SDJN03_28658, partial [Cucurbita argyrosperma subsp. sororia]2.6e-41100Show/hide
Query:  MASTGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSRD
        MASTGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSRD
Subjt:  MASTGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSRD

XP_011658881.1 uncharacterized protein LOC105436102 [Cucumis sativus]3.5e-2272.22Show/hide
Query:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD
        ST Q+A ++++DE ETE L YNS TWVPH RT IY+P GHEWVMKDIP NAASF R  WFRDSD VDDLNPD
Subjt:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD

XP_022989019.1 uncharacterized protein LOC111486209 [Cucurbita maxima]1.0e-2173.53Show/hide
Query:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDT
        ++H +E E ETEPL+YNS TWVPH RT IY+P GHEWVMKD+P NAASFS  +WFRD DGVDDLNPDT
Subjt:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDT

XP_023531513.1 uncharacterized protein LOC111793725 [Cucurbita pepo subsp. pepo]1.0e-2173.53Show/hide
Query:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDT
        ++H +E E ETEPL+YNS TWVPH RT IY+P GHEWVMKD+P NAASFS  +WFRD DGVDDLNPDT
Subjt:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDT

XP_038887565.1 uncharacterized protein LOC120077680 [Benincasa hispida]1.4e-2365.17Show/hide
Query:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD----------TVFGSRD
        S GQ+A +Q+EDE ETE L+YNS TWVPH RT IY+P GHEWVMKDIP NAASFS+  WFRDSDG+DDLN D          TVF  RD
Subjt:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD----------TVFGSRD

TrEMBL top hitse value%identityAlignment
A0A0A0K7S0 Uncharacterized protein1.7e-2272.22Show/hide
Query:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD
        ST Q+A ++++DE ETE L YNS TWVPH RT IY+P GHEWVMKDIP NAASF R  WFRDSD VDDLNPD
Subjt:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD

A0A1S3C0N8 uncharacterized protein LOC1034952981.9e-2165.38Show/hide
Query:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSR
        ST Q+  ++++DE ET+ L YNS TWVPH RT IY+P GHEWVMKDIP NAASFSR  WFRDSD VDDLN +    SR
Subjt:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSR

A0A5D3C8X8 Uncharacterized protein1.9e-2165.38Show/hide
Query:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSR
        ST Q+  ++++DE ET+ L YNS TWVPH RT IY+P GHEWVMKDIP NAASFSR  WFRDSD VDDLN +    SR
Subjt:  STGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSR

A0A6J1EIT6 uncharacterized protein LOC1114346652.5e-2173.13Show/hide
Query:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD
        ++H +E E ETEPL+YNS TWVPH RT IY+P GHEWVMKD+P NAASFS  +WFRD DGVDDLNPD
Subjt:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD

A0A6J1JN70 uncharacterized protein LOC1114862095.0e-2273.53Show/hide
Query:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDT
        ++H +E E ETEPL+YNS TWVPH RT IY+P GHEWVMKD+P NAASFS  +WFRD DGVDDLNPDT
Subjt:  ATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19550.1 unknown protein6.0e-1256.25Show/hide
Query:  TWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD
        +WVPH RT I++PPG E VM+D+P  AASF   +W R+ DGVD  +PD
Subjt:  TWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACAGGCCAACGAGCCACACATCAAAGAGAAGACGAGGCAGAGACCGAGCCACTGGCCTATAACTCACCCACTTGGGTGCCTCATTCTCGCACTCGAATTTA
CTACCCTCCGGGCCATGAGTGGGTCATGAAGGACATCCCTACAAATGCAGCTTCCTTCTCTCGACCCTACTGGTTTCGGGATTCCGATGGCGTCGATGACCTGAACCCCG
ACACCGTTTTCGGCAGCCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACAGGCCAACGAGCCACACATCAAAGAGAAGACGAGGCAGAGACCGAGCCACTGGCCTATAACTCACCCACTTGGGTGCCTCATTCTCGCACTCGAATTTA
CTACCCTCCGGGCCATGAGTGGGTCATGAAGGACATCCCTACAAATGCAGCTTCCTTCTCTCGACCCTACTGGTTTCGGGATTCCGATGGCGTCGATGACCTGAACCCCG
ACACCGTTTTCGGCAGCCGGGATTGA
Protein sequenceShow/hide protein sequence
MASTGQRATHQREDEAETEPLAYNSPTWVPHSRTRIYYPPGHEWVMKDIPTNAASFSRPYWFRDSDGVDDLNPDTVFGSRD