; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16348 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16348
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionclassical arabinogalactan protein 9-like
Genome locationCarg_Chr19:6066349..6067628
RNA-Seq ExpressionCarg16348
SyntenyCarg16348
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR044981 - Lysine-rich arabinogalactan protein AGP9/17/18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571935.1 hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6192.23Show/hide
Query:  PLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPP
        P   P   P P      P  ATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPP
Subjt:  PLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPP

Query:  PATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
        PATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Subjt:  PATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA

KAG7011623.1 hypothetical protein SDJN02_26529, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-92100Show/hide
Query:  KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA
        KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA
Subjt:  KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA

Query:  SPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKS
        SPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKS
Subjt:  SPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKS

Query:  WRKETMVGSMLIGMGYVLMMA
        WRKETMVGSMLIGMGYVLMMA
Subjt:  WRKETMVGSMLIGMGYVLMMA

XP_022952421.1 classical arabinogalactan protein 9-like [Cucurbita moschata]1.6e-5695.45Show/hide
Query:  PSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASP
        P  ATPPPVSAPPPAT PPATPPPASPPPATPPPASPPPATPPPAS     PPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASP
Subjt:  PSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASP

Query:  PAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
        PAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Subjt:  PAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA

XP_022972415.1 classical arabinogalactan protein 9-like [Cucurbita maxima]8.7e-4797.81Show/hide
Query:  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGP
        ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPG APVSSPPMPSAEGPGPAGP
Subjt:  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGP

Query:  ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
        ESPTPSQNDNSGVEKSWRKET++GSMLIGMGYVLMMA
Subjt:  ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA

XP_023553858.1 classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]2.1e-5390.86Show/hide
Query:  SSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPP
        ++  PPP + PP ++PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPAS     PPPATPPPATPPP PLASPP
Subjt:  SSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPP

Query:  AAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
        AAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Subjt:  AAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA

TrEMBL top hitse value%identityAlignment
A0A0A0K6D8 Uncharacterized protein3.3e-3679.19Show/hide
Query:  SAPPPATPPP---ATPPPAS--PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAV
        S+PP ATP P   +TPPP S  PP ATPPPASPPPA+PPPASPPPATPPPASPPPA+PPPASPPPA+PPPA+PPPA+P    PPPATPPPAPLASPP AV
Subjt:  SAPPPATPPP---ATPPPAS--PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAV

Query:  PAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM
        PAPAPSKKK+K AAP P+PVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Subjt:  PAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM

A0A1S3BZW9 classical arabinogalactan protein 91.0e-3779.01Show/hide
Query:  PSSAT--PPPVSAPPPA-TPPPATPPPASPPPATPPP-ASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAP
        P +AT  PP  SAPPPA TPPP + P   PP ATPPP A+PPPA+PPPASPPPA+PPPA+PPPA+PPPASPPPA+PPPASPPPA+PPPA+PPPA PPPAP
Subjt:  PSSAT--PPPVSAPPPA-TPPPATPPPASPPPATPPP-ASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAP

Query:  LASPPAAVPAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM
        LASPP AVPAPAPSKKK+K AAPGPAPVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Subjt:  LASPPAAVPAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM

A0A5A7SJX5 Classical arabinogalactan protein 91.0e-3779.01Show/hide
Query:  PSSAT--PPPVSAPPPA-TPPPATPPPASPPPATPPP-ASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAP
        P +AT  PP  SAPPPA TPPP + P   PP ATPPP A+PPPA+PPPASPPPA+PPPA+PPPA+PPPASPPPA+PPPASPPPA+PPPA+PPPA PPPAP
Subjt:  PSSAT--PPPVSAPPPA-TPPPATPPPASPPPATPPP-ASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAP

Query:  LASPPAAVPAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM
        LASPP AVPAPAPSKKK+K AAPGPAPVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Subjt:  LASPPAAVPAPAPSKKKLK-AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM

A0A6J1GK65 classical arabinogalactan protein 9-like7.6e-5795.45Show/hide
Query:  PSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASP
        P  ATPPPVSAPPPAT PPATPPPASPPPATPPPASPPPATPPPAS     PPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASP
Subjt:  PSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASP

Query:  PAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
        PAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Subjt:  PAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA

A0A6J1I8J9 classical arabinogalactan protein 9-like4.2e-4797.81Show/hide
Query:  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGP
        ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPG APVSSPPMPSAEGPGPAGP
Subjt:  ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGP

Query:  ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
        ESPTPSQNDNSGVEKSWRKET++GSMLIGMGYVLMMA
Subjt:  ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA

SwissProt top hitse value%identityAlignment
Q9C5S0 Classical arabinogalactan protein 93.1e-0757.07Show/hide
Query:  PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPA
        P +ATP P   P P TPPP ATPPP S PP  P   SPPP T  PPPA+PPP  ++PPPASPPPATPPP + PP  PP ASPPPATPPP     ATPPPA
Subjt:  PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPA

Query:  PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGYVLMM
        PLASPPA VPAPAP+ K    +P P+P SSPP+PS++ PGP+    SP PS    ND +G  K      MV S++ G   V  M
Subjt:  PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGYVLMM

Arabidopsis top hitse value%identityAlignment
AT2G14890.1 arabinogalactan protein 92.2e-0857.07Show/hide
Query:  PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPA
        P +ATP P   P P TPPP ATPPP S PP  P   SPPP T  PPPA+PPP  ++PPPASPPPATPPP + PP  PP ASPPPATPPP     ATPPPA
Subjt:  PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPA

Query:  PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGYVLMM
        PLASPPA VPAPAP+ K    +P P+P SSPP+PS++ PGP+    SP PS    ND +G  K      MV S++ G   V  M
Subjt:  PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGYVLMM

AT2G14890.2 arabinogalactan protein 98.5e-0862.34Show/hide
Query:  PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPA
        P +ATP P   P P TPPP ATPPP S PP  P   SPPP T  PPPA+PPP  ++PPPASPPPATPPP + PP  PP ASPPPATPPP     ATPPPA
Subjt:  PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPA

Query:  PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQND
        PLASPPA VPAPAP+ K    +P P+P SSPP+PS++ PGP+    SP PS  D
Subjt:  PLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCCAAGCCACAATTATGGATCCTCAAGCATTGTTTTGCCTCACTTTGATCTCTATTGCCTTCGCCGTTGCCGGAGCTCAGCCCCCCTCCAGTCCCCCCACCGCCACCC
CCGTCCCTCCCACCACCACCACCACCCCTCCTCCGCCACTCCTCCTCCAGTATCAGCTCCCCCACCTGCCACTCCACCACCAGCCACTCCCCCTCCGGCTTCCCCACCTC
CAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACCCCTCCTCCAGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACTCCTCCTCCAGCT
TCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCACCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGC
GGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCC
CAGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATG
GCTTAG
mRNA sequenceShow/hide mRNA sequence
AAGCCAAGCCACAATTATGGATCCTCAAGCATTGTTTTGCCTCACTTTGATCTCTATTGCCTTCGCCGTTGCCGGAGCTCAGCCCCCCTCCAGTCCCCCCACCGCCACCC
CCGTCCCTCCCACCACCACCACCACCCCTCCTCCGCCACTCCTCCTCCAGTATCAGCTCCCCCACCTGCCACTCCACCACCAGCCACTCCCCCTCCGGCTTCCCCACCTC
CAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACCCCTCCTCCAGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACTCCTCCTCCAGCT
TCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCACCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGC
GGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCC
CAGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATG
GCTTAGATTTCTTCCTTTTCTATGCTGTCTATGTTGGGTTTTCCATTATTCTTCATTTTGCCTGTTCCTTATTTCATTTCATTTTGATTATTATTATTATTATTATTAGC
CCATTTCTTGTTTGGGACTTTTGATCTCCATATATATAAATACCCATTTGCTTCCGTTCC
Protein sequenceShow/hide protein sequence
KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA
SPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM
A