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Carg16384 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16384
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCW7 protein
Genome locationCarg_Chr12:3659040..3660374
RNA-Seq ExpressionCarg16384
SyntenyCarg16384
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020616.1 hypothetical protein SDJN02_17302 [Cucurbita argyrosperma subsp. argyrosperma]8.6e-56100Show/hide
Query:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVELFLLFLQFYPKGLPVMRFLLELIVECRAFLVISAILSEGAACTV
        MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVELFLLFLQFYPKGLPVMRFLLELIVECRAFLVISAILSEGAACTV
Subjt:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVELFLLFLQFYPKGLPVMRFLLELIVECRAFLVISAILSEGAACTV

Query:  LVMGNNCYE
        LVMGNNCYE
Subjt:  LVMGNNCYE

XP_022131581.1 uncharacterized protein KIAA0930 homolog isoform X1 [Momordica charantia]2.1e-0975.61Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE
        VLTETD CYCVLLNAHDG AFPGKD  ENCNS DV   N++
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE

XP_022131582.1 uncharacterized protein KIAA0930 homolog isoform X2 [Momordica charantia]2.1e-0975.61Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE
        VLTETD CYCVLLNAHDG AFPGKD  ENCNS DV   N++
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE

XP_023536763.1 uncharacterized protein LOC111798043 isoform X1 [Cucurbita pepo subsp. pepo]5.3e-2183.93Show/hide
Query:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE
        MLGDGG TPCRVI+QVLTETDDCYCVLLNAHDG+AFPGKDYEENCNS +VMA  ++
Subjt:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE

XP_023536764.1 uncharacterized protein LOC111798043 isoform X2 [Cucurbita pepo subsp. pepo]5.3e-2183.93Show/hide
Query:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE
        MLGDGG TPCRVI+QVLTETDDCYCVLLNAHDG+AFPGKDYEENCNS +VMA  ++
Subjt:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE

TrEMBL top hitse value%identityAlignment
A0A0A0LN69 Uncharacterized protein8.5e-0970.73Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE
        VLTETD CYCVLLNAHDG AFP KD  ENCNS + +AS+++
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE

A0A6J1BPW6 uncharacterized protein KIAA0930 homolog isoform X11.0e-0975.61Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE
        VLTETD CYCVLLNAHDG AFPGKD  ENCNS DV   N++
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE

A0A6J1BRE7 uncharacterized protein KIAA0930 homolog isoform X21.0e-0975.61Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE
        VLTETD CYCVLLNAHDG AFPGKD  ENCNS DV   N++
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVE

A0A6J1HEZ0 uncharacterized protein KIAA0930 homolog isoform X18.5e-0978.95Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMAS
        VLTETD CYCVLLNAH G AFPGKD  ENCNS ++MAS
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMAS

A0A6J1HH94 uncharacterized protein KIAA0930 homolog isoform X28.5e-0978.95Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMAS
        VLTETD CYCVLLNAH G AFPGKD  ENCNS ++MAS
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G59520.1 CW71.5e-0543.64Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASNVELFLLFLQF
        VLT+ D CYCVLLN+HDG AFP        D   N +   V    V LF  F+ +
Subjt:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASNVELFLLFLQF

AT1G59520.2 CW71.5e-0543.64Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASNVELFLLFLQF
        VLT+ D CYCVLLN+HDG AFP        D   N +   V    V LF  F+ +
Subjt:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASNVELFLLFLQF

AT1G59520.3 CW71.5e-0543.64Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASNVELFLLFLQF
        VLT+ D CYCVLLN+HDG AFP        D   N +   V    V LF  F+ +
Subjt:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASNVELFLLFLQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGAGATGGAGGAGAAACTCCTTGCAGGGTTATTATTCAGGTCTTGACAGAGACTGACGATTGCTATTGCGTACTTCTCAATGCACATGATGGTGTAGCTTTTCC
TGGAAAGGATTATGAAGAAAATTGCAATTCTGGTGATGTTATGGCCTCGAATGTAGAGCTTTTCTTGTTATTTCTGCAATTTTATCCGAAGGGGCTGCCTGTGATGAGGT
TTTTACTTGAATTGATTGTAGAATGTAGAGCTTTTCTTGTTATTTCTGCAATTTTATCCGAAGGGGCTGCCTGTACTGTTTTGGTGATGGGGAATAATTGTTATGAGTAA
mRNA sequenceShow/hide mRNA sequence
TGTTCTACTGCATAGTTTCTCTCAGAACTCGGAGCGTATTCAAACATGTTGTTTCTGCGTTCTTTTTGATTTTTAGAAATTTGAAGCTTCCGGGAGATATGCTCGGAGAT
GGAGGAGAAACTCCTTGCAGGGTTATTATTCAGGTCTTGACAGAGACTGACGATTGCTATTGCGTACTTCTCAATGCACATGATGGTGTAGCTTTTCCTGGAAAGGATTA
TGAAGAAAATTGCAATTCTGGTGATGTTATGGCCTCGAATGTAGAGCTTTTCTTGTTATTTCTGCAATTTTATCCGAAGGGGCTGCCTGTGATGAGGTTTTTACTTGAAT
TGATTGTAGAATGTAGAGCTTTTCTTGTTATTTCTGCAATTTTATCCGAAGGGGCTGCCTGTACTGTTTTGGTGATGGGGAATAATTGTTATGAGTAA
Protein sequenceShow/hide protein sequence
MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASNVELFLLFLQFYPKGLPVMRFLLELIVECRAFLVISAILSEGAACTVLVMGNNCYE