; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16390 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16390
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSmall VCP/p97-interacting protein
Genome locationCarg_Chr12:3609272..3612228
RNA-Seq ExpressionCarg16390
SyntenyCarg16390
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020610.1 hypothetical protein SDJN02_17296 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-40100Show/hide
Query:  MVKIPIRDFEGKPATASKAMGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MVKIPIRDFEGKPATASKAMGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
Subjt:  MVKIPIRDFEGKPATASKAMGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]7.4e-2794.81Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQCVSCLDE QKQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
XP_011649565.1 uncharacterized protein LOC101210682 [Cucumis sativus]8.2e-2693.51Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQCVSCLD  QKQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSA ANKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
XP_022951067.1 uncharacterized protein LOC111454028 [Cucurbita moschata]7.9e-29100Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]1.6e-2693.51Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQCVSCLDE +KQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
TrEMBL top hitse value%identityAlignment
A0A1S3BAJ0 uncharacterized protein LOC1034878333.6e-2794.81Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQCVSCLDE QKQQRKEEERLASVEAR+KAAEAAQRRQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
A0A6J1BPP8 uncharacterized protein LOC1110046881.5e-2589.61Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQC+ CLDE QKQQR+EEERL+SVEAR+KAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSAN N+GEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
A0A6J1GGM5 uncharacterized protein LOC1114540283.8e-29100Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
A0A6J1K846 uncharacterized protein LOC1114920131.5e-2589.61Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQC SCLDE Q+Q+RKEEERLASVEAR+KAAEAAQ+RQEEFEKSAAGRAARAQ+AANAKQSAN NKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
A0A6J1KLT2 uncharacterized protein LOC1114964243.8e-29100Show/hide
Query:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
        MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
Subjt:  MGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein8.4e-2175.34Show/hide
Query:  CVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSM
        C SC D  QK+QRKEEER AS EAR+KAAEAAQRR+E+F+KSAAGRAA+AQ+   AKQSAN NKGEPVLKW M
Subjt:  CVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAATACCCATTCGAGATTTCGAGGGAAAACCTGCAACTGCAAGCAAAGCGATGGGGCAATGCGTGAGTTGTCTGGACGAAGATCAAAAGCAACAGAGAAAAGA
GGAAGAAAGATTGGCCTCCGTTGAAGCTCGGTCCAAAGCTGCCGAAGCAGCTCAGAGAAGGCAAGAAGAATTTGAAAAATCTGCTGCAGGAAGAGCTGCACGTGCTCAGA
TGGCAGCAAATGCAAAGCAATCTGCTAACGCTAACAAGGGAGAACCAGTTCTTAAGTGGAGTATGGGCTGA
mRNA sequenceShow/hide mRNA sequence
AATCCTAACCGTCCAATATAATACGAACGCCAAGAAAGTCAAAATTGATGGTGAAAATACCCATTCGAGATTTCGAGGGAAAACCTGCAACTGCAAGCAAAGCGATGGGG
CAATGCGTGAGTTGTCTGGACGAAGATCAAAAGCAACAGAGAAAAGAGGAAGAAAGATTGGCCTCCGTTGAAGCTCGGTCCAAAGCTGCCGAAGCAGCTCAGAGAAGGCA
AGAAGAATTTGAAAAATCTGCTGCAGGAAGAGCTGCACGTGCTCAGATGGCAGCAAATGCAAAGCAATCTGCTAACGCTAACAAGGGAGAACCAGTTCTTAAGTGGAGTA
TGGGCTGAGGCGGTAATCTATGGGCCAGCTTCATTTCTTCTTTTTTTCTTGTTAATAAATGGAAAAGATTGTATATATATCCGCCTTCCTGGGATCCTCTTATACCCCAA
GCAACTTGTCTTTATACTCCTAGTCTCCCAAGACAGAAGTTATTGGATGAAACTGCGACTCTTGTATTTGTTTATTCATGAATCAAGGAAAGCAATAAGTGTGTGAACTT
AGATTCTTTGACACTTTACTCATGTAAATTTTACTTAACTTCTTATGCCTCTATATGCAATTACTGTAAAGAAACTCATGTGTTGCTCTCTTGGCAAGAACTTTTCTCTG
ATCATATCATTAACGTGTAAGAAAATTGGTAAAAAAGCAAGTATAGAACAGTTTCTGATTATTTACATTCTTTTGTGGATCATAATATTGCAATTGGATATTGATGTTTA
CTGGTTAACTGATGAGAGTAGTTCATTGCTTCAAAATCCAGCAACCATCGCAAGTCCCAACCAAGGATTGCAACCTGTTGATATCAGTTGGTAGATCC
Protein sequenceShow/hide protein sequence
MVKIPIRDFEGKPATASKAMGQCVSCLDEDQKQQRKEEERLASVEARSKAAEAAQRRQEEFEKSAAGRAARAQMAANAKQSANANKGEPVLKWSMG