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Carg16415 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16415
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionS-adenosylmethionine decarboxylase proenzyme-like
Genome locationCarg_Chr12:7217127..7217449
RNA-Seq ExpressionCarg16415
SyntenyCarg16415
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586035.1 hypothetical protein SDJN03_18768, partial [Cucurbita argyrosperma subsp. sororia]1.1e-21100Show/hide
Query:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
KAG7020811.1 hypothetical protein SDJN02_17499, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-39100Show/hide
Query:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNVRLFFDFFDFFEFLMREETILIPFVSVDYEF
        RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNVRLFFDFFDFFEFLMREETILIPFVSVDYEF
Subjt:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNVRLFFDFFDFFEFLMREETILIPFVSVDYEF
TYJ96391.1 S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo var. makuwa]3.7e-1787.72Show/hide
Query:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        RRSV+VVME K G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
XP_023536821.1 S-adenosylmethionine decarboxylase proenzyme-like [Cucurbita pepo subsp. pepo]2.2e-1798Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        MEAKRGTKKS SGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
XP_038890197.1 S-adenosylmethionine decarboxylase proenzyme-like [Benincasa hispida]4.1e-1684.21Show/hide
Query:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        RRSV+VVM+ + G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
TrEMBL top hitse value%identityAlignment
A0A0A0LM83 Uncharacterized protein3.5e-1386.27Show/hide
Query:  MEAKRGTKKSRSGSSN-SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        ME K G KKS S SS+ SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  MEAKRGTKKSRSGSSN-SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
A0A1S3BUN9 Adenosylmethionine decarboxylase1.9e-1488Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        ME K G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
A0A438HV63 Adenosylmethionine decarboxylase2.1e-1365.82Show/hide
Query:  SVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNVRLFFDFFDFFEFLMREETILIPF
        SV+VVME K G KKS S SS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNVR F     F    +REE ILI F
Subjt:  SVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNVRLFFDFFDFFEFLMREETILIPF
A0A5D3BCP3 S-adenosylmethionine decarboxylase proenzyme-like1.8e-1787.72Show/hide
Query:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        RRSV+VVME K G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
A0A6N2M2H1 Uncharacterized protein1.1e-1175Show/hide
Query:  RSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        R VNVVME K G KKS S SSNS    QYE PLGY IED+RP+GGIEKFRSAAYSN
Subjt:  RSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 98.0e-1062.75Show/hide
Query:  VMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        +ME+K G KKS S SS       YEAPLGY IEDVRP+GGI+KF+S+ YSN
Subjt:  VMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
AT3G25572.1 conserved peptide upstream open reading frame 113.6e-1066.04Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQ--YEAPLGYIIEDVRPHGGIEKFRSAAYSNV
        ME K G KK    SSNSS R    +EAPL Y IEDVRP+GGI+KFRSAAYSN+
Subjt:  MEAKRGTKKSRSGSSNSSKRQQ--YEAPLGYIIEDVRPHGGIEKFRSAAYSNV
AT5G15948.1 conserved peptide upstream open reading frame 101.0e-0964Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        ME+K G KKS S SS       YEAPLGY IEDVRP GGI+KF+S+ YSN
Subjt:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAAGAAGCGTTAATGTTGTGATGGAGGCGAAACGCGGTACGAAGAAGTCTCGCAGTGGTAGTAGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACAT
TATTGAAGACGTTCGTCCACACGGTGGTATTGAGAAGTTCCGATCTGCTGCGTATTCCAACGTAAGATTGTTCTTCGATTTCTTCGATTTCTTCGAGTTCTTGATGCGTG
AGGAAACCATCCTGATACCTTTTGTCTCTGTAGATTACGAGTTCTGA
mRNA sequenceShow/hide mRNA sequence
AGAAGAAGCGTTAATGTTGTGATGGAGGCGAAACGCGGTACGAAGAAGTCTCGCAGTGGTAGTAGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACAT
TATTGAAGACGTTCGTCCACACGGTGGTATTGAGAAGTTCCGATCTGCTGCGTATTCCAACGTAAGATTGTTCTTCGATTTCTTCGATTTCTTCGAGTTCTTGATGCGTG
AGGAAACCATCCTGATACCTTTTGTCTCTGTAGATTACGAGTTCTGA
Protein sequenceShow/hide protein sequence
RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNVRLFFDFFDFFEFLMREETILIPFVSVDYEF