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Carg16417 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16417
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDefensin-like protein
Genome locationCarg_Chr12:7222853..7224601
RNA-Seq ExpressionCarg16417
SyntenyCarg16417
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR039641 - Low-molecular-weight cysteine-rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651676.1 hypothetical protein Csa_021158 [Cucumis sativus]6.3e-3357.52Show/hide
Query:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNE-ALCECLYSC-RMTPPPGKV--CQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT
        P V + D+C EGLG CG++CD RCKA+H P ENPQG C+++G+  +LC CLYSC R TP P     C  GLG C+A+C +DCC+AKC  ++ GG+G+CDT
Subjt:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNE-ALCECLYSC-RMTPPPGKV--CQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT

Query:  NVGIRLCQCSYPC
        NVG+ LCQCS+PC
Subjt:  NVGIRLCQCSYPC

KAG6586037.1 putative defensin-like protein 180, partial [Cucurbita argyrosperma subsp. sororia]4.5e-6398.21Show/hide
Query:  DKKPEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTN
        +KK EVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTN
Subjt:  DKKPEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTN

Query:  VGIRLCQCSYPC
        VGIRLCQCSYPC
Subjt:  VGIRLCQCSYPC

KAG7020813.1 Defensin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-66100Show/hide
Query:  MPRDKKPEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYC
        MPRDKKPEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYC
Subjt:  MPRDKKPEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYC

Query:  DTNVGIRLCQCSYPC
        DTNVGIRLCQCSYPC
Subjt:  DTNVGIRLCQCSYPC

TYK13447.1 defensin-like protein 182 [Cucumis melo var. makuwa]2.8e-3355.75Show/hide
Query:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLG-NEALCECLYSC---RMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT
        P V + ++C+EGLG CG++CD RCKA+H P ENPQGRC+++G N +LC CLY+C    + P P + C  GLG C+ +C +DCC+AKC S++ GG+GYCDT
Subjt:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLG-NEALCECLYSC---RMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT

Query:  NVGIRLCQCSYPC
        NVG+ LCQC++PC
Subjt:  NVGIRLCQCSYPC

XP_004148336.2 defensin-like protein 182 [Cucumis sativus]6.3e-3357.52Show/hide
Query:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNE-ALCECLYSC-RMTPPPGKV--CQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT
        P V + D+C EGLG CG++CD RCKA+H P ENPQG C+++G+  +LC CLYSC R TP P     C  GLG C+A+C +DCC+AKC  ++ GG+G+CDT
Subjt:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNE-ALCECLYSC-RMTPPPGKV--CQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT

Query:  NVGIRLCQCSYPC
        NVG+ LCQCS+PC
Subjt:  NVGIRLCQCSYPC

TrEMBL top hitse value%identityAlignment
A0A059CQY4 Defensin-like protein4.2e-2246.3Show/hide
Query:  KSDDLCAEGLGEC--GSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIR
        K +  C+EG+G C  G++C+Q+C+ARH P    QG C+ +    LC C Y C   PP  K+C  G G CS  C + CCS +CA+K + G+GYCD + G  
Subjt:  KSDDLCAEGLGEC--GSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIR

Query:  LCQCSYPC
        LCQC YPC
Subjt:  LCQCSYPC

A0A0A0LMG4 Defensin-like protein3.1e-3357.52Show/hide
Query:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNE-ALCECLYSC-RMTPPPGKV--CQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT
        P V + D+C EGLG CG++CD RCKA+H P ENPQG C+++G+  +LC CLYSC R TP P     C  GLG C+A+C +DCC+AKC  ++ GG+G+CDT
Subjt:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNE-ALCECLYSC-RMTPPPGKV--CQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT

Query:  NVGIRLCQCSYPC
        NVG+ LCQCS+PC
Subjt:  NVGIRLCQCSYPC

A0A2I0JK99 Defensin-like protein5.4e-2249.02Show/hide
Query:  CAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTP-PPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCSY
        C+E LG CG DC+ RC ARH      QG C+     +LC C Y C+  P PP K C  G G CS KC NDCC+A CASK+  G G+C+      LCQC Y
Subjt:  CAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTP-PPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCSY

Query:  PC
         C
Subjt:  PC

A0A5A7SMA4 Defensin-like protein1.5e-3254.87Show/hide
Query:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLG-NEALCECLYSCRMTPP---PGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT
        P V + ++C+EGLG CG++CD RCKA+H P ENPQG C+++G N +LC CLY+C +  P   P + C  GLG C+ +C +DCC+AKC  ++ GG+GYCDT
Subjt:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLG-NEALCECLYSCRMTPP---PGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT

Query:  NVGIRLCQCSYPC
        NVG+ LCQCS+PC
Subjt:  NVGIRLCQCSYPC

A0A5D3CNI5 Defensin-like protein1.4e-3355.75Show/hide
Query:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLG-NEALCECLYSC---RMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT
        P V + ++C+EGLG CG++CD RCKA+H P ENPQGRC+++G N +LC CLY+C    + P P + C  GLG C+ +C +DCC+AKC S++ GG+GYCDT
Subjt:  PEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLG-NEALCECLYSC---RMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDT

Query:  NVGIRLCQCSYPC
        NVG+ LCQC++PC
Subjt:  NVGIRLCQCSYPC

SwissProt top hitse value%identityAlignment
P82733 Defensin-like protein 1832.7e-1844.66Show/hide
Query:  CAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRM--TPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCS
        C EG+G C   CD RCKARH PA   +G C+      LC C Y C    +PP  K C  G G CS +C   CC+  CA K+N G G+CD+     LC+C 
Subjt:  CAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRM--TPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCS

Query:  YPC
        Y C
Subjt:  YPC

P82773 Defensin-like protein 1823.4e-2143.4Show/hide
Query:  DLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCR---MTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLC
        D C +GLG C ++CD+RCKA+H P+   +  C+R     LC+C Y C      P P K C  G G CS +C   CC   CA K+ GG G+C+T      C
Subjt:  DLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCR---MTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

P82789 Defensin-like protein 1816.4e-2044.12Show/hide
Query:  LCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCSY
        +C + LG C   CDQRCKA+H P  + + +C+      LC C Y C     P K+C  GLG C   CN  CC   CA ++NGG GYC+T     LC C Y
Subjt:  LCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCSY

Query:  PC
        PC
Subjt:  PC

Arabidopsis top hitse value%identityAlignment
AT4G30070.1 low-molecular-weight cysteine-rich 592.4e-2243.4Show/hide
Query:  DLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCR---MTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLC
        D C +GLG C ++CD+RCKA+H P+   +  C+R     LC+C Y C      P P K C  G G CS +C   CC   CA K+ GG G+C+T      C
Subjt:  DLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCR---MTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

AT4G30074.1 low-molecular-weight cysteine-rich 191.9e-1944.66Show/hide
Query:  CAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRM--TPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCS
        C EG+G C   CD RCKARH PA   +G C+      LC C Y C    +PP  K C  G G CS +C   CC+  CA K+N G G+CD+     LC+C 
Subjt:  CAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRM--TPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCS

Query:  YPC
        Y C
Subjt:  YPC

AT5G38330.1 low-molecular-weight cysteine-rich 804.5e-2144.12Show/hide
Query:  LCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCSY
        +C + LG C   CDQRCKA+H P  + + +C+      LC C Y C     P K+C  GLG C   CN  CC   CA ++NGG GYC+T     LC C Y
Subjt:  LCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQCSY

Query:  PC
        PC
Subjt:  PC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGTGACAAGAAGCCAGAAGTAAAGAGCGACGACTTATGTGCCGAAGGGCTAGGAGAGTGCGGAAGCGACTGCGACCAAAGGTGCAAAGCCAGGCACATCCCAGC
CGAGAACCCGCAAGGCCGCTGCAACCGCCTCGGCAACGAGGCGTTGTGCGAGTGTCTTTATAGTTGTCGTATGACACCACCACCGGGAAAGGTTTGCCAAGATGGCCTAG
GGCAGTGCAGCGCCAAATGCAACAACGATTGCTGTAGTGCTAAATGTGCGTCTAAGCACAATGGAGGACAGGGCTACTGCGACACCAACGTTGGCATTCGTTTGTGCCAA
TGCAGCTATCCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACGTGACAAGAAGCCAGAAGTAAAGAGCGACGACTTATGTGCCGAAGGGCTAGGAGAGTGCGGAAGCGACTGCGACCAAAGGTGCAAAGCCAGGCACATCCCAGC
CGAGAACCCGCAAGGCCGCTGCAACCGCCTCGGCAACGAGGCGTTGTGCGAGTGTCTTTATAGTTGTCGTATGACACCACCACCGGGAAAGGTTTGCCAAGATGGCCTAG
GGCAGTGCAGCGCCAAATGCAACAACGATTGCTGTAGTGCTAAATGTGCGTCTAAGCACAATGGAGGACAGGGCTACTGCGACACCAACGTTGGCATTCGTTTGTGCCAA
TGCAGCTATCCTTGCTGA
Protein sequenceShow/hide protein sequence
MPRDKKPEVKSDDLCAEGLGECGSDCDQRCKARHIPAENPQGRCNRLGNEALCECLYSCRMTPPPGKVCQDGLGQCSAKCNNDCCSAKCASKHNGGQGYCDTNVGIRLCQ
CSYPC