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Carg16425 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16425
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin
Genome locationCarg_Chr12:7283160..7287292
RNA-Seq ExpressionCarg16425
SyntenyCarg16425
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586044.1 hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4699.02Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GN
        GN
Subjt:  GN

KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-48100Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]2.2e-4593.2Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEINIV  NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

XP_022937980.1 uncharacterized protein LOC111444204 [Cucurbita moschata]1.1e-4799.03Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]2.9e-4592.23Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDN+FEEI+I+  NDFYQSR+AD+
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X11.1e-4593.2Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEINIV  NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

A0A1S4DYF9 uncharacterized protein LOC103493547 isoform X23.5e-4493.2Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK DN+FEEINIV  NDFYQSR+ADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

A0A5A7UM04 Ubiquitin1.2e-4493.07Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGN
        MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQKVENDAVVALTLRK+DN+FEEINIV  NDFYQSR+ADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGN

Query:  W
        W
Subjt:  W

A0A6J1FIC7 uncharacterized protein LOC1114442045.2e-4899.03Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

A0A6J1HY58 uncharacterized protein LOC1114685515.2e-4899.03Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS
        MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADS
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADS

Query:  GNW
        GNW
Subjt:  GNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G37640.1 ubiquitin 92.0e-0435.53Show/hide
Query:  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR
        M+M I  K   + T  I     +T  N+K K++ +   P+  QRLI   SG++L+D +TLAD  ++ D+++ L LR
Subjt:  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLR

AT5G57860.1 Ubiquitin-like superfamily protein7.9e-3372.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE++NI    DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDF

AT5G57860.2 Ubiquitin-like superfamily protein7.9e-3372.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE++NI    DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDF

AT5G57860.3 Ubiquitin-like superfamily protein7.9e-3372.83Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDF
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LADQKVENDAVVALTL+KDDNEFE++NI    DF
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDF

AT5G57860.4 Ubiquitin-like superfamily protein2.6e-2069.7Show/hide
Query:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVEN
        MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LADQKV +
Subjt:  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCA
GCCAATTGTTGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGT
TGCGAAAAGATGATAACGAGTTCGAGGAGATCAACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAA
mRNA sequenceShow/hide mRNA sequence
AATTTACGCCGAACCACTGTGGGATTAGTCCAACCGAGTTTCCAAACACTACCAAAAAAAAAGCTGTGCAAAGCGCTTGCCTTCATTCCTTTTCATCTCATCGCGACTGA
ATTCTTTCTCTCTCAAGCAAGAGACTTCTCGCGGATTTCCAGACTGCGGCGGTGGAGGCTGGATTTTTTTGAAGTGTTGATCCTTTATTTATTGTTTCAAGATGGCCATG
TATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGT
TGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAG
ATGATAACGAGTTCGAGGAGATCAACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAAGGACCGAAAGTTTTCTTCTACTATGTG
TGGTAGTTTATGATGTTCAGCCATCAAGCTTGTGGTGTATTATTGAAATAACTGTTCTATCAGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGA
CTTGGATATCGTAACTCCATGCATTCTCTTTGTTATCCCCCAAAAGTTGCATTGCTGATTGAACTCATTCATGCATTGATTGCTACAAGTTCTATAATATATATGAGTTG
AGAATTTTGTTAGGACCTTTTTAATTTCCTTTAAACTATATGAATTTGGTTTTTAATCGACTCTTTTTCTTATTCATATGATCTTCACAGTGGTGATGGTTTCAAAATAC
TGTGAGTTTTGATGTTTTTGTTAGGAATCATGACTCTCCACGATGGTATGATATTGTCCCATTTGAACATAAGCTCTCGTGGCTTTACTTTGGGCTTCTCCAAAAGGCCT
CATACC
Protein sequenceShow/hide protein sequence
MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGNW