; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16430 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16430
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box protein SKIP1-like
Genome locationCarg_Chr12:7326147..7328192
RNA-Seq ExpressionCarg16430
SyntenyCarg16430
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586049.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]7.8e-17999.67Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSESSLASPAWAELTHECLTNVFSRL+MEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTDSFRL
Subjt:  QTDSFRL

XP_022937978.1 F-box protein SKIP1-like [Cucurbita moschata]3.5e-179100Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTDSFRL
Subjt:  QTDSFRL

XP_022969584.1 F-box protein SKIP1-like [Cucurbita maxima]1.2e-17497.39Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAE SSESSLASPAWAELTHECLTNVFSRL+MEQRWRGPMLVCKHW HAATDP LFSHFDLEPMFDS PTESPAWWTP+FETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGC+KLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGC+NLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTDSFRL
Subjt:  QTDSFRL

XP_023536859.1 F-box protein SKIP1 [Cucurbita pepo subsp. pepo]1.2e-17698.37Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSESSLASPAWAELTHECLTNVFSRL+MEQRWRGPMLVCKHWLHAATDPSLF+HFDLEPMF+S PTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRN FNNLDTSQHMGTVPDSYLN
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTDSFRL
Subjt:  QTDSFRL

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]9.0e-15185.34Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEP SESS    +WAELTHECLTN+ SRL++EQRWRGPMLVCK W  AATDPSLFSHFDLEP F+S PTESPAWW+P+FETKIDSMLRS VHWSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        ++RIRHCSDSSLD VAQ CPNLEVLSIKSC NVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHC NIKT+KRNFFNNLD SQH G VPD+YLN
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        +CPQ+VDSEAAAIAKFMPNLEHLEL FSKLSAKALSLICEGC  LK+LDLFGC+NLTSRDIANATS +ENLE+RKP+F IPR VFHTERYGHWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTD FR+
Subjt:  QTDSFRL

TrEMBL top hitse value%identityAlignment
A0A1S3BUE6 F-box protein SKIP11.2e-14884.04Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSESS    +WAELTHECLTN+ SRL++EQRWRGPMLVCKHW  AA DPSLFSHFDLEP F+S PTESPAWW P+FETKIDSMLRS V WSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        V+R+RHCSDSSLD VAQ CPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HC NIKTLKRN+FNNLD SQH G VPD+YL+
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFM NLEHLEL FSKLSAKAL+ ICEGC NLKYLDLFGC+NLTSRDIANATS LENLE+RKP+F IPR VFHTERY HWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTD FR+
Subjt:  QTDSFRL

A0A5A7UJH9 F-box protein SKIP11.4e-14984.36Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSESS    +WAELTHECLTN+ SRL++EQRWRGPMLVCKHW HAA DPSLFSHFDLEP F+S PTESPAWW P+FETKIDSMLRS V WSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        V+R+RHCSDSSLD VAQ CPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HC NIKTLKRN+FNNLD SQH G VPD+YL+
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFM NLEHLEL FSKLSAKAL+ ICEGC NLKYLDLFGC+NLTSRDIANATS LENLE+RKP+F IPR VFHTERY HWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTD FR+
Subjt:  QTDSFRL

A0A5D3BD72 F-box protein SKIP11.2e-14884.04Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSESS    +WAELTHECLTN+ SRL++EQRWRGPMLVCKHW  AA DPSLFSHFDLEP F+S PTESPAWW P+FETKIDSMLRS V WSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        V+R+RHCSDSSLD VAQ CPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HC NIKTLKRN+FNNLD SQH G VPD+YL+
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQ+VDSEAAAIAKFM NLEHLEL FSKLSAKAL+ ICEGC NLKYLDLFGC+NLTSRDIANATS LENLE+RKP+F IPR VFHTERY HWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTD FR+
Subjt:  QTDSFRL

A0A6J1FHJ2 F-box protein SKIP1-like1.7e-179100Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTDSFRL
Subjt:  QTDSFRL

A0A6J1I319 F-box protein SKIP1-like5.6e-17597.39Show/hide
Query:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS
        MAE SSESSLASPAWAELTHECLTNVFSRL+MEQRWRGPMLVCKHW HAATDP LFSHFDLEPMFDS PTESPAWWTP+FETKIDSMLRSVVHWSLGSLS
Subjt:  MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLS

Query:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
        VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGC+KLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN
Subjt:  VLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLN

Query:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
        ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGC+NLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Subjt:  ACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF

Query:  QTDSFRL
        QTDSFRL
Subjt:  QTDSFRL

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP17.5e-9256.76Show/hide
Query:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDC
        W  L  E L N+ SRL++++ W GPM V K WL    DP L+S FDLEP FDS P ES   W+P+FE K+D MLRSVV WS G L+ +R+RHCSD +L  
Subjt:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDC

Query:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIA
         A RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++C N++ LKRN  +   +S+H+G+VP  YL+ACPQ+ D+EA AI 
Subjt:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIA

Query:  KFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPR--PVFHTERYGHWRLYDERFQTDSFRL
        K M NLEHLE+ FS+LS K L+ ICEGC  L+YLDLFGC++L+SRDI +  S+L+ L EV+KP   +PR   V  TERYGHWRLYDERF   + R+
Subjt:  KFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPR--PVFHTERYGHWRLYDERFQTDSFRL

Q9M096 Putative F-box/LRR-repeat protein 192.6e-7652.65Show/hide
Query:  PAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSL
        P W+ELT ECL ++FSRLS EQRW GPMLV K+W++A  DP+L + FDLE  F S P ES  WWTP+FE K+DS LRSVV  S G L+ +RIRHC++ SL
Subjt:  PAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSL

Query:  DCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAA
           A+RCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L  S      P  YL   P+  + EA  
Subjt:  DCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAA

Query:  IAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWR
        I K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L+NL E+ KP F+ P  V    R G+ R
Subjt:  IAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWR

Q9M0U9 F-box protein SKIP195.9e-2030.77Show/hide
Query:  SPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSD-S
        S  W EL  E  + +  RL   +       VC+ W     DPS++   D+  + D              +  ++ M R  V  S G L  + I +     
Subjt:  SPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSD-S

Query:  SLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQ-EVDSE
         L+ +A R  NL  L +  C  +TD    + A+    L E+++SYC   S  SL ++G+ C N+KTLK                    LN  PQ E D +
Subjt:  SLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQ-EVDSE

Query:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL
        A AIA+ MP L HL+LC + LS   L+ I + C NL++LDL  C N+
Subjt:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL

Q9S9V8 Putative F-box/LRR-repeat protein 92.2e-1929.67Show/hide
Query:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDL---EPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSS
        WAEL  E  +++  RL   +  +    VCK W     DPS++   D+   E + +S           +    I+ +    V  S G L  + I +  ++S
Subjt:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDL---EPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSS

Query:  -LDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEA
         L+ +A R  NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G+ C N++TLK N   +              +  C    D  A
Subjt:  -LDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEA

Query:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL
         AIA+ MP L HL+L  + LS   L+ I EGC +LK L L  C+N+
Subjt:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL

Q9S9V9 Putative F-box/LRR-repeat protein 236.9e-2130.45Show/hide
Query:  MAEPSSESSLASPA---------WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSV
        +A  SS SS   P+         WAEL  +  +++  RL   +  +    VCK W     DPS++   D++   D             F+  ++SM R  
Subjt:  MAEPSSESSLASPA---------WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSV

Query:  VHWSLGSLSVLRIRHCSDSSLDC-VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQH
        V  S G L  + I +   + L   +A R  NL+ L +  C  +TD  +AK       L  +++SYC   S  SL  IG+ C N+KTLK N    +  S  
Subjt:  VHWSLGSLSVLRIRHCSDSSLDC-VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQH

Query:  MGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL
                        D  A AIA+ MP L HL+L  + L+ K L+ I +GC +L++LDL  C N+
Subjt:  MGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein4.2e-2130.77Show/hide
Query:  SPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSD-S
        S  W EL  E  + +  RL   +       VC+ W     DPS++   D+  + D              +  ++ M R  V  S G L  + I +     
Subjt:  SPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSD-S

Query:  SLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQ-EVDSE
         L+ +A R  NL  L +  C  +TD    + A+    L E+++SYC   S  SL ++G+ C N+KTLK                    LN  PQ E D +
Subjt:  SLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQ-EVDSE

Query:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL
        A AIA+ MP L HL+LC + LS   L+ I + C NL++LDL  C N+
Subjt:  AAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL

AT4G05497.1 RNI-like superfamily protein1.6e-2029.67Show/hide
Query:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDL---EPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSS
        WAEL  E  +++  RL   +  +    VCK W     DPS++   D+   E + +S           +    I+ +    V  S G L  + I +  ++S
Subjt:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDL---EPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSS

Query:  -LDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEA
         L+ +A R  NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G+ C N++TLK N   +              +  C    D  A
Subjt:  -LDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEA

Query:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL
         AIA+ MP L HL+L  + LS   L+ I EGC +LK L L  C+N+
Subjt:  AAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL

AT4G08980.1 F-BOX WITH WD-40 23.0e-1927.76Show/hide
Query:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETK--IDSMLRSVVHWSLGSLSVLRIRHC-SDSS
        W EL  + L  +FS L +++       VCK W  A T P  +   D+E             W+ +F     +D ML  ++  S GSL  L +    +DS 
Subjt:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETK--IDSMLRSVVHWSLGSLSVLRIRHC-SDSS

Query:  LDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAA
           +AQ   +L+ L +     +T+  +  +A     L  +D+SYC +I   ++  IGKHC +++   RN  + LD +  +               D EA 
Subjt:  LDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAA

Query:  AIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL
        AIA  MP L+ LE+ + ++S + +  I   C+ L++L+L GC ++
Subjt:  AIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL

AT4G30640.1 RNI-like superfamily protein1.8e-7752.65Show/hide
Query:  PAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSL
        P W+ELT ECL ++FSRLS EQRW GPMLV K+W++A  DP+L + FDLE  F S P ES  WWTP+FE K+DS LRSVV  S G L+ +RIRHC++ SL
Subjt:  PAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSL

Query:  DCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAA
           A+RCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L  S      P  YL   P+  + EA  
Subjt:  DCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAA

Query:  IAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWR
        I K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L+NL E+ KP F+ P  V    R G+ R
Subjt:  IAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWR

AT5G57900.1 SKP1 interacting partner 15.3e-9356.76Show/hide
Query:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDC
        W  L  E L N+ SRL++++ W GPM V K WL    DP L+S FDLEP FDS P ES   W+P+FE K+D MLRSVV WS G L+ +R+RHCSD +L  
Subjt:  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDC

Query:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIA
         A RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++C N++ LKRN  +   +S+H+G+VP  YL+ACPQ+ D+EA AI 
Subjt:  VAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIA

Query:  KFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPR--PVFHTERYGHWRLYDERFQTDSFRL
        K M NLEHLE+ FS+LS K L+ ICEGC  L+YLDLFGC++L+SRDI +  S+L+ L EV+KP   +PR   V  TERYGHWRLYDERF   + R+
Subjt:  KFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPR--PVFHTERYGHWRLYDERFQTDSFRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCGTCGTCGGAATCATCATTGGCGTCGCCGGCATGGGCGGAGCTGACGCACGAATGCCTAACCAACGTCTTCTCACGGCTCAGTATGGAGCAGCGGTGGCG
CGGCCCGATGTTAGTGTGCAAGCACTGGCTCCATGCCGCCACCGACCCCTCTCTCTTCTCCCACTTCGACCTTGAGCCCATGTTCGACTCCGGCCCCACCGAGTCGCCGG
CCTGGTGGACGCCCCAGTTCGAGACGAAGATTGATTCCATGCTGCGGTCTGTCGTCCATTGGAGCCTTGGTTCTCTCTCTGTTCTTCGGATCAGACACTGCTCCGATTCA
TCTCTCGATTGTGTGGCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGATTGCTCTTGGTTGTCAAAA
GCTTCGGGAAGTCGACATAAGCTACTGTCACGAAATCTCGAACATATCTTTGGCGTTGATTGGCAAGCACTGTTCGAATATCAAGACTCTAAAACGAAACTTTTTTAATA
ATCTAGATACTTCCCAACATATGGGAACTGTCCCTGACAGTTATCTAAATGCCTGCCCTCAAGAGGTGGATTCAGAAGCTGCGGCTATTGCAAAGTTCATGCCCAACTTA
GAGCACCTTGAACTCTGCTTCTCTAAACTATCTGCTAAAGCTCTTAGTTTGATATGTGAAGGATGTCTAAACCTCAAGTACTTGGATCTGTTTGGGTGTATGAACTTGAC
AAGCCGTGATATAGCAAATGCTACATCAAAATTGGAGAATTTGGAGGTTAGGAAACCGAGTTTCGATATTCCGAGGCCAGTCTTTCACACGGAGAGGTATGGTCATTGGA
GGTTGTACGACGAGAGATTCCAAACAGATAGTTTCCGACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGCCGTCGTCGGAATCATCATTGGCGTCGCCGGCATGGGCGGAGCTGACGCACGAATGCCTAACCAACGTCTTCTCACGGCTCAGTATGGAGCAGCGGTGGCG
CGGCCCGATGTTAGTGTGCAAGCACTGGCTCCATGCCGCCACCGACCCCTCTCTCTTCTCCCACTTCGACCTTGAGCCCATGTTCGACTCCGGCCCCACCGAGTCGCCGG
CCTGGTGGACGCCCCAGTTCGAGACGAAGATTGATTCCATGCTGCGGTCTGTCGTCCATTGGAGCCTTGGTTCTCTCTCTGTTCTTCGGATCAGACACTGCTCCGATTCA
TCTCTCGATTGTGTGGCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGATTGCTCTTGGTTGTCAAAA
GCTTCGGGAAGTCGACATAAGCTACTGTCACGAAATCTCGAACATATCTTTGGCGTTGATTGGCAAGCACTGTTCGAATATCAAGACTCTAAAACGAAACTTTTTTAATA
ATCTAGATACTTCCCAACATATGGGAACTGTCCCTGACAGTTATCTAAATGCCTGCCCTCAAGAGGTGGATTCAGAAGCTGCGGCTATTGCAAAGTTCATGCCCAACTTA
GAGCACCTTGAACTCTGCTTCTCTAAACTATCTGCTAAAGCTCTTAGTTTGATATGTGAAGGATGTCTAAACCTCAAGTACTTGGATCTGTTTGGGTGTATGAACTTGAC
AAGCCGTGATATAGCAAATGCTACATCAAAATTGGAGAATTTGGAGGTTAGGAAACCGAGTTTCGATATTCCGAGGCCAGTCTTTCACACGGAGAGGTATGGTCATTGGA
GGTTGTACGACGAGAGATTCCAAACAGATAGTTTCCGACTTTGA
Protein sequenceShow/hide protein sequence
MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDS
SLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNL
EHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERFQTDSFRL